Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g01905 AATGGAAGTGAGTTTGAAGAACAAACAAAGGTGCACATAAACGAGTACGCCGATGCTGGTTTAAGAACTTTGGTTCTAGCATATCGTGAGCTGAAAGAGGAGGAGTTTAATGCATTTCATCAAGAGTTCATCAAAGCGAAAAACACAGTAAGCACAGATCGCGACGACATAATCGATCAGTTGACAGAAAGCATCGAGAAAGATTTGATTCTTCTTGGTGCTACAGCAGTTGAAGATAAACTTCAAAATGGGGTCCCTGAATGCATAGACAAACTTGCTCAGGCTGGAATTAAAATATGGGTTCTGACAGGTGATAAGATGGAAACAGCCATCAACATTGGCTTCGCCTGCAGTTTACTTAGACAAGGAATGAAGCAAATAATTATCAGCTCAGAGACTCCAGAAGGAAAAGCTTTAGATAAAGTCGAAGAT 432 40.28 NGSEFEEQTKVHINEYADAGLRTLVLAYRELKEEEFNAFHQEFIKAKNTVSTDRDDIIDQLTESIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIISSETPEGKALDKVED 144
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 25161524 25162195 + MELO3C000868.2.1 Cme12g01905 345122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g01905 144 SUPERFAMILY HAD-like 65 121 IPR036412 -
Cme12g01905 144 Gene3D - 76 143 IPR023214 -
Cme12g01905 144 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 143 - -
Cme12g01905 144 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 143 - -
Cme12g01905 144 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 7 85 IPR023299 GO:0000166
Cme12g01905 144 Gene3D - 2 75 IPR023299 GO:0000166
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme12g01905 Cme-Chr12:25161524 Cme05g00789 Cme-Chr5:9872982 2.31E-69 dispersed
Cme12g01905 Cme-Chr12:25161524 Cme12g01906 Cme-Chr12:25173231 3.47E-28 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g01905 K01530 K14802 csv:101209427 280.411