Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g01907 ATGGGCAAAGAAGCTCTTGAAGATTGGAGGAGAACCAAACAGGATATGGAGATGAATAACAGGAAAGTGAAAGTACATATTGGAGATGGTGAGTTTGTTGAGACTAAATGGATGGACTTGAGAGTTGGGCATGTAGTTAAAGTGGAGAAGGATGAATTCTTCCCTGCTGATCTCATTTTACTTTCTTCGAGTTATGAGGAAGCGATTTGCTACGTCGAGACGATGAATCTTGATGGAGAAACAAATTTGAAACTGAAAAATGCATTAGAAGCAAGCTCGAACTTACATGATGATTCAAGCTTCCAGAATTTCAAGGCTATAATAAAATGTGAAGACCCCAATGCAAATTTGTATTCCTTCGTAGGTAGTATGTTGCTCGATGAACAACAACATCCCCTCAGCCCTCAACAACTTCTTCTTCGAGACTCAAAGCTTCGAAACACGGATTTTATATACGGGGTGGTGATTTTCACTGGTCGCGATACAAAGGTTATTCAGAACTCAACAGATCCTCCTTCCAAGAGAAGCAAAATTGAGAAAAGGATGGATAAGATCGTGTTCTTTCTGTTTGCTGTCTTGGTTTTGTTATCAGTCGTTGGGTCAATTTTCTTTGGTGTTAAGACTAGAGACGACTTAGAAAATGGAAGAGCTACGAGA 657 39.73 MGKEALEDWRRTKQDMEMNNRKVKVHIGDGEFVETKWMDLRVGHVVKVEKDEFFPADLILLSSSYEEAICYVETMNLDGETNLKLKNALEASSNLHDDSSFQNFKAIIKCEDPNANLYSFVGSMLLDEQQHPLSPQQLLLRDSKLRNTDFIYGVVIFTGRDTKVIQNSTDPPSKRSKIEKRMDKIVFFLFAVLVLLSVVGSIFFGVKTRDDLENGRATR 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 25173585 25174337 + MELO3C000372.2.1 Cme12g01907 345124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g01907 219 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 219 - -
Cme12g01907 219 SUPERFAMILY Calcium ATPase, transmembrane domain M 3 209 IPR023298 -
Cme12g01907 219 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 219 - -
Cme12g01907 219 Gene3D - 5 169 - -
Cme12g01907 219 SUPERFAMILY Calcium ATPase, transduction domain A 25 166 IPR008250 -
Cme12g01907 219 Pfam E1-E2 ATPase 18 206 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme12g01907 Cme-Chr12:25173585 Cme01g00305 Cme-Chr1:2276988 1.02E-23 dispersed
Cme12g01907 Cme-Chr12:25173585 Cme10g00310 Cme-Chr10:2035551 1.63E-105 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g01907 K01530 K14802 csv:101205650 408.683