Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g01926 ATGGCAGAAGAGATTGGAGAAGAATTCAAGAGGAGTGGTTTCACGTTCGATGAAGAGGAAGAGATTCTCAAGAGATGTGTCACGTTCTGTGTTAACTACAATCTAAAGCCTTCGGATATTGTTTCTAGCTGGGAAGTCTACTATCTCAATAGGCTATTAGATGGGTCAGTGGTTGAACTTGAACAGATGGATGGGTTCTTACAACATTTACAGAATGAGCAAAAAGAAACAGTCATTAAAGGGGAACCGGATCTTCATGTTTACTCAAGCAAAGATGTTGACGTGATTTTGAATGATGAGAACGAAGATCTAAATGAAGACATTCTGAAGACCCCAAATGGGAAATCTCAGAGTCTCCACAAAGAGCGATTGGATTTGACACCTTACACGAATGGAGGCTTGTTCTCATCAGGAAAGCCTTCAAAGCATGAGACACCCTTTGGCCAAAGAACAGAAAAGTTTGTTGTGAGGTTCAACATTAATAGCATGCCTGATATGGTGACTGCTGAAAAGGAAGATAATAGTGAGAATGATGAAGATGCAATCATCAAGAAGGTTCGTCCCCTACAAGGATGCTCATTGACAGTCCATGGATCAGGATTTGGACTTGAACCAAATTGCAGGTTCATGTATGACAAGGATGAAGATAGGTTTAATGCTCTTGATAACCGAATCATGAGGCATGCTAAAGCTCTTGCTGCATCTGGGCTCTACGAAGAAGCAGTGGACCCAACAGTTGCTTCACAGAGAAGCATGTTTGCGGTGGGCATGATTTATTGTGATGGAGAAGGACACTTGAACGATAAGTCCATCTTGTTGCAAAGCAGTATCGCGCATTCAGGGGGACAGCGAGTTCGTCTAGAATTACAAAACTTAAGCCAATTTTCAATCTTTCCTGGCCAGGTAGTAGGTATTGAAGGGCATAATCCTAGTGGACACTGCTTGATTGCGTCCAAATTTGTAGATTCTTTTCCTTTGTCTGCCACTATAGACCCCATTCTGCCTCCAGCAAAGAAGATAGCTTTGAACCATGATGTCCAACCAATTAATCAATCTTCTACACCGTCAGAATTATCGATGATCATTGCGTCGGGCCCCTATACAACAACGGACAACTTATTGTTTGAGCCTTTGACTGAGTTATTAGCATATGCAAAAAGAAAAGTTCCCCAGCTACTAATATTGCTTGGACCATTTGTTGATTCTGAACATTCTGATATCAAGAGAGGAACTGTAGAGATGAGCTTTGAGGAAATTTTCAAATTTGAAGTTTTAAGAAGGGTACAAAATTATGCAGAACACATGGGTCCTGATGCGCGTGTACTGTTGATGCCATCTACAAGGGATGCTAATCACGACTTTGTTTTTCCCCAGCCTCCTTTCGACATTCCATCTGATCTTAAACTTCAGATATCCAGTCCCCCAAACCCATGCATCTTGGAAGCAAATCAGGCAAAGATAGCCTGCTGTACCATGGATATTCTCAGACACCTCAGTGGAGAAGAGCTGTCAAGAAATCTAACTAAGGGAGGAACCAACGATCGCCTGAGCACACTTGCTAGTCATATACTTCGCCAGCGCAGCTTTTATCCTCTGTACCCTCCGGCCGAAGGAGTTCCACTGGACTTCTCACTTGCCCCACAAGCTCTTGACATCTCTGTAATACCTGATATTCTCATTCTTCCATCCGACATGAAACACTTCGTGAAGGTTATATCCCTTGGTGAAGGAGGTTCAGAGGAAGAGCAAGCGAGATGCGTATGTGTGAATCCTGGAAGATTGGCCAAGGGTGAAGGAGGGGGTACTTTTGTCGAGCTCAATTACTTCGGTAGGCCTGACCAGATAAATGCTTCGGTTGTCAGCATATGA 1869 43.12 MAEEIGEEFKRSGFTFDEEEEILKRCVTFCVNYNLKPSDIVSSWEVYYLNRLLDGSVVELEQMDGFLQHLQNEQKETVIKGEPDLHVYSSKDVDVILNDENEDLNEDILKTPNGKSQSLHKERLDLTPYTNGGLFSSGKPSKHETPFGQRTEKFVVRFNINSMPDMVTAEKEDNSENDEDAIIKKVRPLQGCSLTVHGSGFGLEPNCRFMYDKDEDRFNALDNRIMRHAKALAASGLYEEAVDPTVASQRSMFAVGMIYCDGEGHLNDKSILLQSSIAHSGGQRVRLELQNLSQFSIFPGQVVGIEGHNPSGHCLIASKFVDSFPLSATIDPILPPAKKIALNHDVQPINQSSTPSELSMIIASGPYTTTDNLLFEPLTELLAYAKRKVPQLLILLGPFVDSEHSDIKRGTVEMSFEEIFKFEVLRRVQNYAEHMGPDARVLLMPSTRDANHDFVFPQPPFDIPSDLKLQISSPPNPCILEANQAKIACCTMDILRHLSGEELSRNLTKGGTNDRLSTLASHILRQRSFYPLYPPAEGVPLDFSLAPQALDISVIPDILILPSDMKHFVKVISLGEGGSEEEQARCVCVNPGRLAKGEGGGTFVELNYFGRPDQINASVVSI 622
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 25277565 25285747 - MELO3C002044.2.1 Cme12g01926 345143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g01926 622 Pfam DNA polymerase alpha/epsilon subunit B 361 570 IPR007185 GO:0003677|GO:0006260
Cme12g01926 622 Gene3D - 1 77 IPR043034 -
Cme12g01926 622 Gene3D - 339 517 - -
Cme12g01926 622 Gene3D - 518 619 - -
Cme12g01926 622 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 1 622 IPR016722 -
Cme12g01926 622 PIRSF DNA_pol_alpha_2 1 614 IPR016722 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g01926 K02321 - csv:101206268 1221.45