Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g01977 ATGAACCGCACATTCAATTCATACCCAGATGAAAATTATGCGAATGTTAGGAGATCCATGAGGCAGACTGAGGATGATCATCACAAGAACTTATCGGACAAGGATCCGCACTGTGATTTCAAGAGCAACCATGAATTGAAATTTGGGTTCAGTTCGATTCGAGTAATGGGTATGTTTGTGGTTTTGATGATGTTCATTTCTGTGATTTTTTCGGTCTCTGTGGTTTTTAGAGATCCACCATCGGATGCTGTAATTGAAGGTTCAGATGTGTGGATTCCTCAGTGGAACTCTGACCCAGTAGATTCTAAGGTTGGAGATCTTCAAACAGTTATACAGCCAGTTGATAAACTGCTTAGTGGCCTTCTTTCTGCCAAACATGGGGTTGGTTCTTGTCTCAGTAGGTACAATTCAGTTGCTTATCAACACAAGCTGGCTTACGAACCCTCTTCTTACTTAATCTCCAAATTGCGGGGTTATGAAGATCTTCATAAGCGTTGTGGAGTTTATACTGAATCTTACAACAAAACTTTGGAGCAGCTTAGGTCTAATGGTAGTAGCAGCTCCTCAGACTGTAAATATCTTCTTTGGATTTCCTTCAGTGGGTTAGGGAATAGAATACTAACCCTTACTTCGGCATTTCTTTATGCTCTCCTCACAAATCGAGTTCTTCTAGTTGACCCTGGAACTGACATGGCTGATCTCTTCTGTGAACCATTTCCTGAGGTTTCCTGGTTTCTTCCCCAAGATTTTCCATTAAAAGATGACTTCAGCAGTTTCAACCAGAACTCTCCTAATTGCTATGGGAAAATAATGAAGAATAGCATAATGCCAGATTCAAGTGGAATGATCTTGCCATCTGTTGTTTATCTTCATTTGGTCCATGATTACGATGATGATGATAAGCTTTTCTTCTGTGATCAAGACCAAGCTCTTCTGCAGCAATCTCCTTGGCTTGTTATGAAAACAGACAATTATTTTGTCCCATCTCTCTTTTTGATCCCATCATTCGAGAAAGAACTTAATGATCTTTTCCCAAATAAAGATACAGTTTTCCACTTCTTGGGTCGATATCTGTTCCACCCTGCGAATTCAGTTTGGGGACTGATTACGAGATATTATCACGCTTACTTGGCTAGAGCTAGCGAAAGAATAGGCATTCAAATTAGAGTGTTCGATACAGGAACTGGTCCTTTTCAACACATCCTGGATCAGGTTCTGGACTGCACCCTGAAAGAGAATCTGTTGCCACAAACCGAGAGGCAAATGTATGCCATCGATCCAGTTGGTAATCAAAAGTCAAAGGCTGTGCTGATAACTTCCTTGAGCGCTGGTTACTTTGAGAAGTTAAGAGACATTTACTGGGAGAATCCGACAGTAACTGGGGAGATAATTAGTTTCTACCAACCAAGCCATGAGGAACACCAGCAAACTGAAAAAAGTATACATAACCAGAAGGCATTGGCAGAGATGTATTTGTTAAGTACAACTGATGTATTGGTCACCAGTTCATGGTCGACCTTTGGATACGTGGCTCAAGGTCTTGGTGGTCTGAAGCCATGGATATTGTACAAACCTGAAAATCGTACTGCACCAAATCCACCTTGCCGTCGAGCCATGTCTATGGAGCCTTGTTTCCATGCACCTCCTTTCTACGACTGCAAAGCTAAGAAAGGAGTGGACACTGGTAAACTTGTTCCTCATGTGAGGCACTGTGAGGACATGAGCTGGGGACTTAAGTTGGTTGATGATCCATATGATTGA 1761 41.74 MNRTFNSYPDENYANVRRSMRQTEDDHHKNLSDKDPHCDFKSNHELKFGFSSIRVMGMFVVLMMFISVIFSVSVVFRDPPSDAVIEGSDVWIPQWNSDPVDSKVGDLQTVIQPVDKLLSGLLSAKHGVGSCLSRYNSVAYQHKLAYEPSSYLISKLRGYEDLHKRCGVYTESYNKTLEQLRSNGSSSSSDCKYLLWISFSGLGNRILTLTSAFLYALLTNRVLLVDPGTDMADLFCEPFPEVSWFLPQDFPLKDDFSSFNQNSPNCYGKIMKNSIMPDSSGMILPSVVYLHLVHDYDDDDKLFFCDQDQALLQQSPWLVMKTDNYFVPSLFLIPSFEKELNDLFPNKDTVFHFLGRYLFHPANSVWGLITRYYHAYLARASERIGIQIRVFDTGTGPFQHILDQVLDCTLKENLLPQTERQMYAIDPVGNQKSKAVLITSLSAGYFEKLRDIYWENPTVTGEIISFYQPSHEEHQQTEKSIHNQKALAEMYLLSTTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPNPPCRRAMSMEPCFHAPPFYDCKAKKGVDTGKLVPHVRHCEDMSWGLKLVDDPYD 586
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 25573140 25576483 + MELO3C001997.2.1 Cme12g01977 345194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g01977 586 Gene3D - 369 529 - -
Cme12g01977 586 PANTHER 2-ALPHA-L-FUCOSYLTRANSFERASE, PUTATIVE-RELATED 31 582 - -
Cme12g01977 586 Pfam Xyloglucan fucosyltransferase 104 554 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cme12g01977 586 PANTHER FUCOSYLTRANSFERASE 2-RELATED 31 582 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cme12g01977 586 Gene3D - 188 241 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g01442 Cme-Chr7:20116417 Cme12g01977 Cme-Chr12:25573140 1.17E-177 dispersed
Cme10g00393 Cme-Chr10:2530034 Cme12g01977 Cme-Chr12:25573140 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g01977 K13681 - csv:101219153 1140.56