Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g02044 ATGGACGCATTAACTTTGAGGAAAAAGGTACAGAGGAAAGCTAAAATCAGAGGGCTTTACAGCATCAAACTGGAAGCTCTTGACGAGATCGTTTCCTTTGTCTCTCGTTTCCATGGCTTCGAAGATGACGCTATAGAACTTGTTCTTGACGATCTCCATGAAGAATCTTTGAAATCTCCAATATTAGAAAAGGATGGGGTGCATCGGGTTATCAGCAAACTGCTTGCAGCTGAAGAAGCGGAAGAAGCAAGTCCCAATACCATTACCAGTACAACTGCTCTTTGCATCATCGACGCTTTTGATATCTCCAAGTTTCGTTATGATCCCATAAAAAAGATCTTTCATCGGCACACAGGGGACCTTCCTATTCATGGAGATGCTCCTGCTAAAGCTGCTTTATATAGAGATAGGTTTCTTTTGCTGTCCCAAAGGCTCTCCCGAGATCAGCATTTCTCCAAACCTGCTTTTGACATTGGCATGTCTCATTTTGGAAGTTGTGAGATTTCTCCTATTCAATCTTTGGTGGGGCAAACAGGGAGGAAATGGGTCATGGGAGTGATCTCTCAAATGGAAGATGGCCATTTTTACTTGGAAGACCTTACTGCATCTGTGGAAATTAATTTATCTAATGCTAAGATAACTACAGGTCTATTTACAGAGAACACCATTATCGTAGCTGAAGGAGAGATGCTCGTGGAGGGAATTTTCCAGGTTGTTACGTGTGGATTTCCTCCATTAGAGGAAAGGGACAAGTCTCTTAAATTGCTAGCAGGCCAGGACTTCTTTGGAGGTGGTGTGCTACCTAAAGAGGAGACTCTCAGGCTTGCAGATCTGGAAAAGAAAGCTGTTAACGATATGTTTGTCATACTCTCTGACATTTGGTTGGATAGTGAAGAGGCCATGGGAAAACTGGAGACCATACTTGATGGTTTCGAGAATGTGGAAGTGGTTCCTTCCTTATTTGTTTTGATGGGGAATTTTTGTTCCCATCCTTGTAATATTGCCTTTAATTCTTTCTCAAGTCTCAGACTACAGTTTGGTAAGTTAGGAAAAATGATAGCAGCTCATCCACGATTAAACAAGCATAGCAAGTTTCTTTTTATTCCCGGTCCAGATGATGCAGGGCCATCAACAGTTCTACCTAGGTGTGCTTTGCCGAAGTATTTAACCGAAGAGCTTCAAGTGCATGTTCCAAATGCCACTTTCTCAAGTAACCCTTGCAGGGTCAGATTCTACACTCAGGAAATTGTATTTTTCCGACAGGACCTGCTTTATAGAATGCGCCGTTCCTGTCTCATACCACCTTCCACAGAAGAAACAAGTGATCCTTTTGAGCATCTTGTTGCCACCATAACTCATCAAAGTCATCTCTGTCCTCTTCCTCTAGTTATTCAACCAATTATCTGGAATTACGACCACTGTCTTCATCTATATCCTACTCCTCATGTGATAGTTTTGGGGGATAGAAGTAAGCAACAAGCGTTCAAATACACAGGAATCACTTGCTTTAATCCTGGTTCCTTCACAAATGATAGCACTTTCGTGGCGTATCGTCCTTGCAATCAAGAAGTTGAACTGTCTGCCTTGTAA 1590 42.2 MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFEDDAIELVLDDLHEESLKSPILEKDGVHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIFHRHTGDLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSNAKITTGLFTENTIIVAEGEMLVEGIFQVVTCGFPPLEERDKSLKLLAGQDFFGGGVLPKEETLRLADLEKKAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLNKHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQVHVPNATFSSNPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 25915046 25920282 + MELO3C001937.2.1 Cme12g02044 345261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g02044 529 Gene3D - 296 525 - -
Cme12g02044 529 Pfam DNA polymerase alpha/epsilon subunit B 287 493 IPR007185 GO:0003677|GO:0006260
Cme12g02044 529 PIRSF DNA_pol_epsilon_2 1 529 IPR016266 GO:0003677|GO:0006261|GO:0008622
Cme12g02044 529 Gene3D - 1 73 - -
Cme12g02044 529 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 7 528 IPR016266 GO:0003677|GO:0006261|GO:0008622
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme12g01800 Cme-Chr12:24484118 Cme12g02044 Cme-Chr12:25915046 3.02E-06 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g02044 K02325 - csv:101207444 997.653