Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmetu02g0279 ATGGCTTCTCTTACTTCCCCACCCACCATGAATCTCCTCAACAAATCCCTCTCTCTTTCCCCACCTCAATCTTTCATTACCTCAATACCCTCTTCTTCTTCTTCCTCCAAACCCCTTCGTTCCCCTGCTATTCGCTGTTCTGTTGCTGTGGCACCTTCTGTTTCCACCAACGTCTCCAAGGAATTCAAGTTGAAGTCCCTCAAGGCCCGTCAGATCATTGACAGTAGAGGCAATCCTACGGTCGAGGTTGATTTGATTACTGACGATCTCTACCGATCCGCTGTTCCTAGTGGGGCTTCTACTGGGATCTATGAGGCGTTGGAGCTTAGAGATGGGGACAAAACTGTTTATGGAGGTAAAGGTGTGCTTACTGCTGTTAAGAATATCAATGATATCTTGGCTCCTAAGCTCGTTGGCGTCGATGTCAGGAATCAAGAAGAAGTTGATGCAATCATGCTGGAAATTGATGGAACCCCAAACAAGTCGAAACTCGGGGCAAATGCTATACTAGGAGTTTCTTTGAGTGTCTGCAGAGCTGGTGCTGGCGCTAAGGGACTACCATTGTATAGACACATCCAAGAATTATCAGGCACCAAGGAACTTGTTATGCCAGTTCCTGCTTTTAATGTTATAAACGGGGGTAGCCATGCTGGAAATAATCTAGCAATGCAAGAATTTATGATCTTACCTGTAGGTGCTTCATCTTTCGCAGAGGCACTTCGGATGGGAAGTGAAGTTTATCACACACTGAAGGGAATTATTAAAGCAAAATATGGACAAGATGCCTGCAATGTTGGAGATGAGGGTGGATTCGCTCCAAATGTTCAAGATAACAGAGAAGGACTGGTGTTGCTTATTGATGCCATTGAAAAGGCTGGCTATACAGGAAAGATCAAAATAGGAATGGATGTTGCAGCTTCCGAGTTTTTCACTACAGAGGGAAAATATGATTTGAACTTCAAGAAACAGCCAAATGATGGAGCTCATGTTCACTCAGCTCATGGCCTTGGCGAACTCTATAGACAGTTTGTCAAAGATTTTCCCATTGTTTCCATCGAAGACCCCTTTGATCAAGATGATTGGAGTTCCTGGGCTTCTCTACAATCTTCTGTTGATATCCAACTTGTGGGAGATGACTTGCTGGTAACAAATCCAAAGAGAATTGCCGAAGGCATTCAGAAAAAAGCTTGTAATGCTTTACTTCTGAAGGTTAACCAAATTGGATCAGTGACTGAATCAATTCAAGCTGCTCTTGATTCCAAGGCTGCTGGCTGGGGAGTGATGGTCAGCCACCGAAGTGGTGAAACTGAAGATAATTTTATTGCTGATCTTTCCGTTGGCTTAGCTAGTGGACAGATCAAAACTGGAGCTCCATGCCGAAGCGAACGGTTAGCCAAATACAATCAGCTTCTTCGCATTGAAGAAGAACTTGGCAGTGTTCGATATGCCGGTGCGTCTTTCAGATCACCTTAG 1473 44.4 MASLTSPPTMNLLNKSLSLSPPQSFITSIPSSSSSSKPLRSPAIRCSVAVAPSVSTNVSKEFKLKSLKARQIIDSRGNPTVEVDLITDDLYRSAVPSGASTGIYEALELRDGDKTVYGGKGVLTAVKNINDILAPKLVGVDVRNQEEVDAIMLEIDGTPNKSKLGANAILGVSLSVCRAGAGAKGLPLYRHIQELSGTKELVMPVPAFNVINGGSHAGNNLAMQEFMILPVGASSFAEALRMGSEVYHTLKGIIKAKYGQDACNVGDEGGFAPNVQDNREGLVLLIDAIEKAGYTGKIKIGMDVAASEFFTTEGKYDLNFKKQPNDGAHVHSAHGLGELYRQFVKDFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEGIQKKACNALLLKVNQIGSVTESIQAALDSKAAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKYNQLLRIEEELGSVRYAGASFRSP 490
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23035245 23039312 + PI0015083.1 Cmetu02g0279 348291

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmetu02g0279 490 Gene3D - 58 185 IPR029017 -
Cmetu02g0279 490 FunFam Enolase 1 186 490 - -
Cmetu02g0279 490 SFLD enolase 65 477 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cmetu02g0279 490 Pfam Enolase, N-terminal domain 65 192 IPR020811 -
Cmetu02g0279 490 Hamap Enolase [eno]. 62 477 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cmetu02g0279 490 SUPERFAMILY Enolase C-terminal domain-like 200 483 IPR036849 -
Cmetu02g0279 490 PRINTS Enolase signature 95 109 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cmetu02g0279 490 PRINTS Enolase signature 429 446 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cmetu02g0279 490 PRINTS Enolase signature 222 235 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cmetu02g0279 490 PRINTS Enolase signature 377 388 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cmetu02g0279 490 PRINTS Enolase signature 400 414 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cmetu02g0279 490 PRINTS Enolase signature 165 181 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cmetu02g0279 490 CDD enolase 66 476 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cmetu02g0279 490 Gene3D - 186 490 IPR036849 -
Cmetu02g0279 490 SFLD Enolase 65 477 - -
Cmetu02g0279 490 FunFam Enolase 62 185 - -
Cmetu02g0279 490 SMART Enolase_N_3 64 192 IPR020811 -
Cmetu02g0279 490 SUPERFAMILY Enolase N-terminal domain-like 64 195 IPR029017 -
Cmetu02g0279 490 SMART Enolase_C_3 200 490 IPR020810 -
Cmetu02g0279 490 PANTHER ENOLASE 64 488 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cmetu02g0279 490 ProSitePatterns Enolase signature. 400 413 IPR020809 -
Cmetu02g0279 490 NCBIfam phosphopyruvate hydratase 65 486 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cmetu02g0279 490 Pfam Enolase, C-terminal TIM barrel domain 201 488 IPR020810 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmetu02g0279 K01689 - - csv:101209516 908.286
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmetu02g0279 Cmetu-Chr2:23035245 Cmetu08g1066 Cmetu-Chr8:17359369 2.20E-164 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g393 . . . . . . . . . . . . . Car11g00221 Sed12g2041 . Cpe04g01430 Bhi02g00032 Tan09g1975 Cmetu02g0279 . Hepe09g0308 . . Cla06g01505 Cam06g1660 Cec06g1722 Cco06g1717 Clacu06g1626 Cmu06g1575 Cre06g2385 . . Cone13ag0013 Cone19ag0011 . . . . . . . Bda14g00902 . Bpe15g00556 Bma03g00876 . . . Cmo11g00246 . . . . . . . . . . . . . . . . . . . . Lsi06g01369 Csa01g00309 Chy02g02429 Cme02g01786
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011033 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30