Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmetu02g1512 ATGACATCAAGTATGTTGAGTGGAGAAAGAAGGTGGACATCAGCCAGACGAGGTGGGATGACTGTTTTAGGAAAGGTTGCTGTTCCAAAACCTATTAACTTACCCAGTCAAAGGTTAGAAAACCATGGTTTGGACCCAAATGTGGAAATTGTACCCAAGGGTACCCTCAGTTGGGGCAATAAATCAACTTCATCTGCAACAAATGCATGGGGTTCCTCATCCGTTTCTCCAAATACAGATAGTGCTTCTGGTTCGCCAAGCCATCTCTGTGGTCGCCCTTCATCTGCTGGAGGTGGCACTCGCCCATCAACAGCTGGCAGTGACAGGTCCCATGAACCTCATGCTAATGCATGGGGACCAAGTTCTAGACCATCGTCTGCCTCTGGGCCTGTGACATTAAGCCATGCATCACTCACATCCTTGCGTCCTCACAGTGCCGAAACTAAATCTAGTAGCTCACAATTGTCAAGATTTGCAGAAACTTCTGAAAATCCAGTGGCTTGGAATTCTGCTGTGACTACAGAGAAAGTGGGAACTATGGCATGTAAGAGTGATGGGTTTTCTTTGACATCTGGAGATTTTCCTACTCTGGGTTCAGAGAAAGAATGTGTAGGAAAGGATGCTGAGTCACAAGATAGCGGGTCAAATGGAGGAGCTACAATGAAAGAGAGGACTGGAACTTCGGCAATTGATGATCCTAAAAGTGTGACTACAAGTGTTGCAAGTGCTAATTCCTGGAGAAGTGATAATCTTCCACACAACGATGATGGATCTAGGCCAAATGTAGAGAAATGGCTTGGGCATCCCCAACCTTACCCTGGTGCAAATATCCCTCCACCACATTATGATGCCTGGCATGGTTCTCCAGTAAACAATCCTCAAGGTGGTGTATGGTATAGAGGTCCTCCACAAGGAGGTCCTCCATATAGAACTCCAGTTGCTCCTGGTAATTTCCCTATGGATCCATTTCTGTATTATCCTCCACAGATTCCCCCTGGTGGTCTTCCCAATCCTCAGCCTCCTCATGGAACTGGACCCAGGGGACATCATCCTAAAACTGGAGATATATACAGACCTCCTATACATGAGGGTTTTATTCACCCAGGCATGCCAATTAGACCTGGATTTTACCCTGGTCCAGTTTCCTATGACGGATATTATCGACCTCCCATGGGCTACTGCAATTCCAACGATAGAGATGCTCCATTTATGGGAATGCCTGCTGGACCTGCTGGACCTGCTGTTTACAACAGGTTCTCGGGACAAGGCCAGAGTGCCTCTGAGCCTGTAAGTTCCCATGGTGTATCTGGTGGAAAGGGTATGGTTCCAGAACAAGTAGAATCTGGTCTTCCTTGTGATAATCAAGGACCATACAAGGTTCTTCTGAAGCAGCAGGGAAACAATGGTAAGAATGAAGAAAAAGATAAGATAAACTCAACAACCACCAATCAGTTGATTCTTGAGAAGGCTGACCAACAGAGAGTGTCTTCATGGGAGAATGACTGGGATCATAAAAAGGAAGTTGATTTGAGGAGGAGAAAATTGGGGGTGGAACCGTATTCTCAGGCTTCTGTCAACCAAGAAGCTCAATCTTCTGAAAGTATGAAAGCCAAGTCTCATGGAAACACGAGGACTGGTGATGGTTTACTAGAAAAGGCGGATGCTGCTGCTTCTGGTTTCTCTGAAGTTCCCAAATCACTGGCTACTTCCACAAAAGATTCAAGTCTGATTCAGAAGATAGAGGGATTGAATGCAAAAGCACGGGCTTCTGATGCGCGACATGATGCTGCACCTATTTGTAGCAGGGAGGAGCCAGATGAGTTTCAATCTGATGATAAGCACTCTGATCACGTTGTTGCCCATGAAGCGGGTGTGGGTGCTGTTTTTCCAGAAAACAGAGATTTTAATGAAGTCATAGACCCTGCCTCCAGTGAATTACGCTTATCCACTGTGGATAGGAACGTTAAATTACACAGTGGAGCATCCGTCCACAGGAGGCCGAATCGTGGAATGCAAGGGAGAAGTGATCATCATGGCCGAGGAAAAGCCAATGCCCAGGAGGTTGATGGGTGGCATAAAAGACCTCTGTTGGATTCCCCAGGCATGATGGCAACTCCCAACCAAGAAAGTTCGGTGCTTGCAAGAGACCAAAATGCTTTAGGAGCTTTGAATAAGGCCAAGCCATTTTCTTCGGATAGCCATGGAGATGGACCTACCCAATCCACAGGTGATTCAAAAGATAGTCAAGCTCAGCGAACAAAGATGAGAGAGCTAGCAAAGCAACGCACCAAACAATTGCAGGAGGAAGAGGAGGAAAGGACTAGGAAACAGAAGGCTAGGGCCTTGGCAAAGCTTGAAGAGTTGAACAGACGTACAGTATCTGGGGAGGGGCCAAATCAGGGGTCTGAAGCTGATAATGATGCTATAAGAAATAAGATAGAAGAACCTCACAAAACGCTTGGAGATACATCATCGAAGAAACCAAGTAGTGGCAACAAGGAGCAGGCTGTGGCACATAATGAATTGAGATCTTTGGAGCAGGAGCTAAGTATTTCTGATGGAGCTCAAAACAAGAATGCTTCTGAGGTGAATGGGAGCGGTGCATCCTTGAAGCACAAGCGTACGGGAAATAAACAAAAACCAAATATTTCATCTGAAAAGATTCCCCATTTAATAAAGGAATCAAAAGGTCAGATAGTTGTAGCTGACATTCATACAGTTGTAGAGGAGTCCAGCAATATCATTACAGATTCTGTTGCCGAACCTTCAACTCATGCAAGAAAGAAAAATAACAAGAGTGGGAAGAACAGGCACAAAGTGGAAGAGGCCTTGATATCTGCACCATCACCTCAAATTTCGAAAGAAGCAAATCTTACAACGGAATATGATAAACCAAAGGCTTCTCAATTTGTATTGGATCCACCTTCAGATCCACAACCGCCAATTAATAGGGATGAAAATCAGTTCAGAGAGCTGCTACCGCAGTTGCCAGTTGTAGAGACACTTGGCAGAGGTAATGGTCAGTGGAAGTCCCAGCATTCTCGCAGGGTGGCAAGAAATGCTCAAAATAGACCAGGAGAAAAGATTAATGGTAGTGATTCTGTTATGTGGGCCCCTGTGAGATCTCTCAACAAATGTGAGGTTACTGATGAAACTGTTCCAAAGAACGAAGCAGAGTCTGTTGCTTCATCTGTGAAGATTGATAATCAAGTGCAGAATATTCCAAAAAATAAGCGAGCTGAAAGGGAGATATATGTACCGAAGCCAGTAGCCAAAGAAATGGCACAGCAAGGAACTATCCATCAAGATACTTCCATAATAAACCAGGCACCAGATGATAATAAGGCAGATTCAAGTTCTCAAAGTTCTGATAATACTAGATCTGCTGGTGCTGTTTCGGGAAATGTGGGATTTTCCACAGATCACAGGAACGGGGATGGTAGGCAACATAAACAAAGCAAGGCACATTCATCGTGGCGGCAACGGGGAGCAACGGAACATGGGCAAGGCTTGCAAGATCAGCCATCTTATGTTTCAAATGCTGGTAGTTATGTTCAAAAAACAAATGAATATCAATTACCTGAGAAGTCCACCGGAAGCTCCACCAATGAGTTCGTGAGTCAAGTTGATGAGTGGGATCCACCAGATGGATGGAATGATCCCAACTACTCGGCCTCTATCCCACCTGTCACTGCAGCTGTTGGAAGAGACCAGGGAGTGACAGGCAGGGGAAAACGGTCTCAATCTAAGGGGCACAAGGGTGTAGGGAACAATTATGATCTAAATGAAAAGAAACATAGAGGTGGAGACAACGAAAAGATTTCTTCCGAATCCGAAGTGCTTGAGGCAGATCAGAAAGATGTATCTGCTGCTGCCAAAGAAAATAGGGGTGTTGGGGAACGTTCAACATCTCATTGGCAACCCAAATCGCGGATGGTCCAACCTCACAATCACCAAAATGTTGATGCTGAAGCTGCACAGACTAATAAAATCGGATCTAGGCAATTCTCACATCGCACAAAAACAACTGATGATGTAGCCCAAAACCAGTATGATACCTCCTCCGGTGCAAGAACCATCACAGAAGAGGGATCAAATGTTGTTCATCATGGAGCCAGGGGAGAGAAGAAAGTTTCTTCCCGCAAGGAGCGGCCTTACTCCCCAAACCATGGTCCTATCCATACAGTTGAGGCTGCTCCAGCAAATACAGATGTCAGACGTGAGCAACAGTTGCCTACATTTTACCATAAAGGCGGCTCAAGGTACGTGGAGAGGGGCCACCAACAAGGTCAGTCCAGAAGAGATGGTGGGAACTTTTACAAGCAACAAGGTGGACCAGTTTGA 4344 45.53 MTSSMLSGERRWTSARRGGMTVLGKVAVPKPINLPSQRLENHGLDPNVEIVPKGTLSWGNKSTSSATNAWGSSSVSPNTDSASGSPSHLCGRPSSAGGGTRPSTAGSDRSHEPHANAWGPSSRPSSASGPVTLSHASLTSLRPHSAETKSSSSQLSRFAETSENPVAWNSAVTTEKVGTMACKSDGFSLTSGDFPTLGSEKECVGKDAESQDSGSNGGATMKERTGTSAIDDPKSVTTSVASANSWRSDNLPHNDDGSRPNVEKWLGHPQPYPGANIPPPHYDAWHGSPVNNPQGGVWYRGPPQGGPPYRTPVAPGNFPMDPFLYYPPQIPPGGLPNPQPPHGTGPRGHHPKTGDIYRPPIHEGFIHPGMPIRPGFYPGPVSYDGYYRPPMGYCNSNDRDAPFMGMPAGPAGPAVYNRFSGQGQSASEPVSSHGVSGGKGMVPEQVESGLPCDNQGPYKVLLKQQGNNGKNEEKDKINSTTTNQLILEKADQQRVSSWENDWDHKKEVDLRRRKLGVEPYSQASVNQEAQSSESMKAKSHGNTRTGDGLLEKADAAASGFSEVPKSLATSTKDSSLIQKIEGLNAKARASDARHDAAPICSREEPDEFQSDDKHSDHVVAHEAGVGAVFPENRDFNEVIDPASSELRLSTVDRNVKLHSGASVHRRPNRGMQGRSDHHGRGKANAQEVDGWHKRPLLDSPGMMATPNQESSVLARDQNALGALNKAKPFSSDSHGDGPTQSTGDSKDSQAQRTKMRELAKQRTKQLQEEEEERTRKQKARALAKLEELNRRTVSGEGPNQGSEADNDAIRNKIEEPHKTLGDTSSKKPSSGNKEQAVAHNELRSLEQELSISDGAQNKNASEVNGSGASLKHKRTGNKQKPNISSEKIPHLIKESKGQIVVADIHTVVEESSNIITDSVAEPSTHARKKNNKSGKNRHKVEEALISAPSPQISKEANLTTEYDKPKASQFVLDPPSDPQPPINRDENQFRELLPQLPVVETLGRGNGQWKSQHSRRVARNAQNRPGEKINGSDSVMWAPVRSLNKCEVTDETVPKNEAESVASSVKIDNQVQNIPKNKRAEREIYVPKPVAKEMAQQGTIHQDTSIINQAPDDNKADSSSQSSDNTRSAGAVSGNVGFSTDHRNGDGRQHKQSKAHSSWRQRGATEHGQGLQDQPSYVSNAGSYVQKTNEYQLPEKSTGSSTNEFVSQVDEWDPPDGWNDPNYSASIPPVTAAVGRDQGVTGRGKRSQSKGHKGVGNNYDLNEKKHRGGDNEKISSESEVLEADQKDVSAAAKENRGVGERSTSHWQPKSRMVQPHNHQNVDAEAAQTNKIGSRQFSHRTKTTDDVAQNQYDTSSGARTITEEGSNVVHHGARGEKKVSSRKERPYSPNHGPIHTVEAAPANTDVRREQQLPTFYHKGGSRYVERGHQQGQSRRDGGNFYKQQGGPV 1447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24432095 24439675 - PI0003776.1 Cmetu02g1512 349524

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 1158 1208 - -
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 807 822 - -
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 1301 1362 - -
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 330 345 - -
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 209 223 - -
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 911 985 - -
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 703 717 - -
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 56 90 - -
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 749 791 - -
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 823 837 - -
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 1003 1034 - -
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 1097 1142 - -
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 845 872 - -
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 519 547 - -
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 119 163 - -
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 230 251 - -
Cmetu02g1512 1447 Coils Coil 752 791 - -
Cmetu02g1512 1447 PANTHER PROTEIN MODIFIER OF SNC1 1 817 1434 IPR038808 -
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 950 964 - -
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 520 541 - -
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 185 270 - -
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 650 890 - -
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 1257 1300 - -
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 1005 1029 - -
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 669 694 - -
Cmetu02g1512 1447 Pfam BAT2 N-terminus 13 136 IPR009738 -
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 54 163 - -
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 1368 1388 - -
Cmetu02g1512 1447 CDD UDM1_RNF168_RNF169-like 749 791 - -
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 330 354 - -
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 1072 1447 - -
Cmetu02g1512 1447 MobiDBLite consensus disorder prediction 733 748 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmetu02g1512 - - - - 0.0
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g781 . . . . . . . . . . Cma10g00119 Cma11g00088 Car10g00106 Car11g00079 Sed08g0103 . Cpe04g01566 Bhi02g00478 Tan09g2266 Cmetu02g1512 . Hepe09g0213 . . Cla06g01673 Cam06g1861 Cec06g1911 Cco06g1916 Clacu06g1817 Cmu06g1758 Cre06g2575 . . . . . . . . . Blo15g00262 . . Bpe07g00848 . . . . Cmo10g00123 Cmo11g00088 . . . . . Cpe18g00849 . . . . . . . . . . . . . . Lsi06g01564 Csa01g00136 Chy02g02591 Cme02g01988
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006102 0 1 1 0 2 1 3 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 5 1 1 39