Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmetu03g1599 | ATGGAGGAGACGATTCGGTGTAGTCTATGTACTGCTCGTAAATTTGATGCTAAGATCCGCTTCACCGTTGTTGTATTTGAGATTTTGCTTCTTCTGGCTTTGGATGTTGCATATGTAAAATCTGAAGACCGCCAGTTGGAAAGGGGAGCTGAAAGCATTGTTTCACACGCCTGCATCCATGATCAGATACTAGAGCAAAAAAGGCGGCCTGGGCTCAAGGTATACTCCGTTACACCACAAGTTTATGATGTCTCTGGTACTGCAAAACCCATTCATAGAAAGGGTAGAGCATTGCTTGGAGTTCCAGAACAATCAGATCAGCAAGAAAGTGCAAAACAACCTATCAGAATATATCTGAATTATGATGCTGTCGGTCACTCACCTGAAAGAGATTGCCAAAAAGTTGGCGACATTGTGAAGCTGGGAGAACCTCCTGTCACTAGTTCCTTTTTGGGCTCTCCTTCTTGTAATCCTCATAACAATCCTCCAATTTCGGGAGACTGCTGGTATAATTGCACATTGGATGATATATCTGGGGAGGACAAAAGGCATCGACTGCACAAGGCTTTAGGTCAGACAGCAGATTGGTTTAGAAGAGCATTAGCTGTTGAACCCGTGAAAGGGAACTTGCGTCTAAGTGGATACTCTGCTTGTGGACAGGATGGTGGTGTGCAACTACCACGTGAATATGTCGAAGAGGGTATTCCCAATGCAGACTTGGTTCTTTTAGTGACCACAAGGCCTACCACTGGGAACACACTTGCTTGGGCTGTTGCATGTGAACGAGATCAATGGGGTCGTGCAATTGCAGGACATGTGAATGTTGCACCTCGGCATTTGACTGCTGAAGCAGAAACCTTACTATCAGCTACTCTTATACACGAGGTTATGCACGTCCTTGGTTTTGATCCACATGCCTTCGCCCATTTTAGAGATGAGACGAAAAGAAGGCGTAGTCAGGTAACAGAACAGGTCTTGGATGAAAGACTTGGGCGCACAGTGACTCGTGTGGTGCTACCACGTGTTGTTATGCATTCAAGATATCATTATGGGGCATTTTCAGAGAATTTCACAGGTTTAGAGCTTGAAGATGGAGGTGGACGTGGCACTTCAGGATCTCACTGGGAGAAAAGGCTTCTGATGAATGAAATTATGACGGGTTCAGTTGATACAAGATCTGTAGTTTCGAAAATGACTCTGGCTTTATTGGAAGATAGTGGATGGTACCAGGCCAACTATAGCATGGCAGATCGTCTTGATTGGGGTCGCAACCAGGGAAATGATTTTGTCACTTCCCCCTGCAATCTATGGAAGGGGGCATACCATTGCAACACAACACAGTTGTCAGGATGTACATATAATAGGGAGGCAGAGGGTTACTGTCCAATTGTTAGCTATAGCGGGGATCTCCCTCAATGGGCTCGATATTTTCCACAACCGAACAAGGGGGGACAATCGTCATTGGCCGATTATTGTACTTACTTTGTGGCTTACTCGGATGGGTCGTGCACTGACACCAACAGTGCACGTGCACCTGACAGAATGTTGGGTGAAGTACGAGGAAGTAACTCAAGGTGTATGGCCTCCTCACTTGTGAGGACTGGATTTGTAAGAGGTTCCATGACCCAAGGAAATGGTTGTTATCAGCATCGGTGCATTAACAATTCATTGGAGGTGGCTGTTGATGGTATGTGGAAAGTTTGCCCTGAAGCTGGTGGACCGGTTCAGTTTCCTGGCTTCAATGGTGAATTGGTCTGCCCTGCATATCATGAACTTTGTAGCAAAGACTCGGTTTCAGTGCCTGGAAAGTGCCCCAATACTTGCAATTTCAATGGAGATTGTGTGGATGGAAAGTGTTTTTGCTTTCTAGGCTTTCATGGACATGACTGTAGCAAACGATCTTGTCCTAACAACTGTAGTGATCATGGAAGGTGTCTTTCTAATGGACTTTGTGAATGTGGAAATGGTTACACCGGCATTGACTGCTCCACTGCTATTTGTGATGAGCAATGTAGCCTTCATGGTGGTGTCTGTGATAATGGCATTTGCGAGTTCCGTTGTTCGGATTACGCTGGATATTCATGCCAGAATAGCTCCAGGCTTATATCAAGTCTCTCTGTTTGCAAAAATGTATTGCAAAGGGATATGACTGGCCAACACTGTGCACCAAGTGAACCGAGTATACTACAGCAACTCGAGGAAGTTGTTGTCATGCCAAATTACCACCGTTTGTTTCCGGGTGGTGCCCGGAAACTTTTTAACATCTTTGGTGGTAGCTACTGTGATGCAGCTGCCAAGCAGTTGGCTTGCTGGATTTCGATACAAAAGTGTGATCAAGATGGTGACAACAGACTCCGAGTATGCCATTCTGCTTGTCAGTCATACAATCTAGCTTGTGGGGCATCACTTGACTGCTCTGATCAGACCCTTTTCAGCAGCGAGGAGGAAGGTGAAGGGCAATGTACTGGCTCCGGTGAAATCAAATTGTCGTGGTTTAATCGATTGCGGAGTAACTTATTCGTAAGTAACAGCACCTCGAAAGCAGGAGGGAGGTTTGTAAAATAG | 2565 | 45.61 | MEETIRCSLCTARKFDAKIRFTVVVFEILLLLALDVAYVKSEDRQLERGAESIVSHACIHDQILEQKRRPGLKVYSVTPQVYDVSGTAKPIHRKGRALLGVPEQSDQQESAKQPIRIYLNYDAVGHSPERDCQKVGDIVKLGEPPVTSSFLGSPSCNPHNNPPISGDCWYNCTLDDISGEDKRHRLHKALGQTADWFRRALAVEPVKGNLRLSGYSACGQDGGVQLPREYVEEGIPNADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRDETKRRRSQVTEQVLDERLGRTVTRVVLPRVVMHSRYHYGAFSENFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYQANYSMADRLDWGRNQGNDFVTSPCNLWKGAYHCNTTQLSGCTYNREAEGYCPIVSYSGDLPQWARYFPQPNKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDRMLGEVRGSNSRCMASSLVRTGFVRGSMTQGNGCYQHRCINNSLEVAVDGMWKVCPEAGGPVQFPGFNGELVCPAYHELCSKDSVSVPGKCPNTCNFNGDCVDGKCFCFLGFHGHDCSKRSCPNNCSDHGRCLSNGLCECGNGYTGIDCSTAICDEQCSLHGGVCDNGICEFRCSDYAGYSCQNSSRLISSLSVCKNVLQRDMTGQHCAPSEPSILQQLEEVVVMPNYHRLFPGGARKLFNIFGGSYCDAAAKQLACWISIQKCDQDGDNRLRVCHSACQSYNLACGASLDCSDQTLFSSEEEGEGQCTGSGEIKLSWFNRLRSNLFVSNSTSKAGGRFVK | 854 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 1689122 | 1696236 | - | PI0025554.1 | Cmetu03g1599 | 351743 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmetu03g1599 | 854 | PANTHER | LEISHMANOLYSIN-LIKE PEPTIDASE | 49 | 816 | IPR001577 | GO:0004222|GO:0006508|GO:0007155|GO:0016020 | |
| Cmetu03g1599 | 854 | Gene3D | Leishmanolysin , domain 2 | 308 | 434 | - | - | |
| Cmetu03g1599 | 854 | Gene3D | - | 107 | 299 | - | - | |
| Cmetu03g1599 | 854 | FunFam | Peptidase M8, leishmanolysin | 108 | 299 | - | - | |
| Cmetu03g1599 | 854 | FunFam | leishmanolysin-like peptidase isoform X2 | 437 | 496 | - | - | |
| Cmetu03g1599 | 854 | Gene3D | Laminin | 634 | 665 | - | - | |
| Cmetu03g1599 | 854 | Gene3D | Laminin | 603 | 632 | - | - | |
| Cmetu03g1599 | 854 | Pfam | Leishmanolysin | 170 | 595 | IPR001577 | GO:0004222|GO:0006508|GO:0007155|GO:0016020 | |
| Cmetu03g1599 | 854 | ProSiteProfiles | EGF-like domain profile. | 631 | 663 | IPR000742 | - | |
| Cmetu03g1599 | 854 | FunFam | leishmanolysin-like isoform X2 | 498 | 593 | - | - | |
| Cmetu03g1599 | 854 | ProSitePatterns | EGF-like domain signature 2. | 651 | 662 | IPR000742 | - | |
| Cmetu03g1599 | 854 | SMART | egf_5 | 634 | 663 | IPR000742 | - | |
| Cmetu03g1599 | 854 | SMART | egf_5 | 592 | 631 | IPR000742 | - | |
| Cmetu03g1599 | 854 | Gene3D | Leishmanolysin domain 3 | 438 | 496 | - | - | |
| Cmetu03g1599 | 854 | ProSitePatterns | EGF-like domain signature 1. | 651 | 662 | IPR000742 | - | |
| Cmetu03g1599 | 854 | Gene3D | Leishmanolysin domain 4 | 498 | 593 | - | - | |
| Cmetu03g1599 | 854 | PRINTS | Leishmanolysin (M8) metalloprotease family signature | 397 | 426 | IPR001577 | GO:0004222|GO:0006508|GO:0007155|GO:0016020 | |
| Cmetu03g1599 | 854 | PRINTS | Leishmanolysin (M8) metalloprotease family signature | 244 | 273 | IPR001577 | GO:0004222|GO:0006508|GO:0007155|GO:0016020 | |
| Cmetu03g1599 | 854 | FunFam | leishmanolysin-like peptidase isoform X2 | 310 | 434 | - | - | |
| Cmetu03g1599 | 854 | SUPERFAMILY | Metalloproteases ("zincins"), catalytic domain | 110 | 598 | - | - |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmetu03g1599 | K01404 | - | - | csv:101217702 | 1766.51 |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi18g890 | . | . | Bda01g00546 | Bda03g00251 | Bpe02g00405 | Bpe04g00204 | . | Bma01g02303 | Cmo05g00229 | Cmo12g00440 | . | . | . | Car12g00464 | Sed11g1006 | . | Cpe07g00442 | Bhi04g00277 | Tan02g1927 | Cmetu03g1599 | . | Hepe10g0673 | . | Lcy13g2009 | Cla08g01515 | Cam08g2005 | Cec08g1581 | Cco08g1716 | Clacu08g1694 | . | Cre08g1477 | Cone4ag1890 | Cone7ag1801 | . | . | . | . | . | Cme03g01980 | . | . | . | . | . | . | . | . | . | . | . | Cma12g00495 | Cma05g00223 | Car05g00185 | . | Cpe11g00184 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Lsi08g01418 | Csa02g02025 | Chy03g01485 | . |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0004346 | 2 | 1 | 1 | 2 | 2 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | 1 | 1 | 42 |