Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmetu04g2791 ATGGCTAAGCTTGCCGAGCAAGCTGAGCGTTACGAGGAGATGGTCGAGTTTATGGAGAAGGTCTCCCGCGCTACAGATAACGAGGAACTCACCGTTGAGGAGCGGAACCTTCTTTCTGTTGCTTACAAGAATGTTATTGGAGCACGTAGAGCTTCCTGGAGGATTATTTCCTCCATTGAACAGAAAGAAGAGAGCCGAGGGAATGATGATCATGTCTCTGTCATCCGAGATTACAGATCCAAGATCGAGACTGAGCTTTCTAACATTTATACCTGGCTGAATTTAAAGACCGGAGCTGAAAGGAAGGAAGCTGCCGAAAGTACACTCACTGCTTATAAATCTGCTCAGGATATTGCAAATGCTGAACTTGCTCCTACTCACCCTATACGACTTGGGCTGGCTTTGAACTTCTCAGTATTCTATTATGAGATTCTGAATTCCCCCGATCGTGCTTGCAGCCTTGCTAAACAGGCTTTCGATGAAGCAATTGCTGAGTTGGATACACTGGGCGAGGAATCGTACAAAGATAGCACTTTGATCATGCAACTTCTTCGTGACAACCTCACCCTATGGACTTCAGACATGCAGGTAATGACATCGAAGGTTGCTTCATCAGCTCCGAAACGCGATGATGAATAG 639 46.01 MAKLAEQAERYEEMVEFMEKVSRATDNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSVIRDYRSKIETELSNIYTWLNLKTGAERKEAAESTLTAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQVMTSKVASSAPKRDDE 212
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 31192206 31194095 + PI0014099.1 Cmetu04g2791 355235

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmetu04g2791 212 PIRSF 2014/3/3 90 204 IPR000308 -
Cmetu04g2791 212 PIRSF 2014/3/3 1 94 IPR000308 -
Cmetu04g2791 212 Gene3D - 92 204 IPR036815 -
Cmetu04g2791 212 SMART 1433_4 1 205 IPR023410 -
Cmetu04g2791 212 PANTHER 14-3-3 PROTEIN 95 195 IPR000308 -
Cmetu04g2791 212 Coils Coil 1 21 - -
Cmetu04g2791 212 SUPERFAMILY 14-3-3 protein 1 194 IPR036815 -
Cmetu04g2791 212 Pfam 14-3-3 protein 1 90 IPR023410 -
Cmetu04g2791 212 Pfam 14-3-3 protein 95 192 IPR023410 -
Cmetu04g2791 212 PRINTS 14-3-3 protein zeta signature 29 58 IPR000308 -
Cmetu04g2791 212 PRINTS 14-3-3 protein zeta signature 78 102 IPR000308 -
Cmetu04g2791 212 Gene3D - 1 91 IPR036815 -
Cmetu04g2791 212 ProSitePatterns 14-3-3 proteins signature 1. 35 45 IPR023409 -
Cmetu04g2791 212 ProSitePatterns 14-3-3 proteins signature 2. 174 193 IPR023409 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmetu04g2791 K06630 - - csv:101210822 353.214
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmetu04g2791 Cmetu-Chr4:31192206 Cmetu07g1402 Cmetu-Chr7:15600565 3.60E-87 dispersed
Cmetu03g2141 Cmetu-Chr3:2587591 Cmetu04g2791 Cmetu-Chr4:31192206 6.80E-85 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g442 . . Bda01g00893 Bda03g00486 . Bpe04g00439 . . Cmo05g00534 Cmo12g00129 Cma01g01616 Cma09g00568 Car01g01232 Car12g00154 Sed04g0158 Cpe06g00431 Cpe07g00142 Bhi04g00777 Tan02g2410 Cmetu03g2141 . Hepe10g0481 . Lcy13g1545 Cla08g01123 Cam08g1580 Cec08g1150 Cco08g1276 Clacu08g1281 . Cre08g1063 . . . . Lsi04g02246 Csa03g04457 Chy04g00245 Cme03g01852 Blo17g00112 Blo18g00127 . Bda13g01393 Bpe02g01128 Bpe14g00462 Bma01g01396 Bma02g00132 Sed05g1594 Cmo01g01661 Cmo09g00555 Cma12g00167 Cma05g00507 Car05g00457 Car09g00495 Cpe11g00447 Cpe02g00365 Bhi09g02451 Tan01g3801 Cmetu04g2791 . Hepe01g2137 Mch11g0676 . Cla11g01392 Cam11g1448 Cec11g1476 Cco11g1473 Clacu11g1607 Cmu11g1426 Cre11g1846 Lsi08g00980 Csa02g02163 Chy03g01354 Cme04g00274
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cmetu07g1402 . 4 241 14-3-3 family AT4G09000 87.0 2.6e-113 405.6
Cmetu03g2141 . 4 232 14-3-3 family AT4G09000 87.0 4.1e-111 398.3
Cmetu04g2206 . 11 246 14-3-3 family AT4G09000 75.4 8.1e-99 357.5
Cmetu01g2437 . 7 238 14-3-3 family AT4G09000 73.1 2.3e-93 339.3
Cmetu10g0316 . 4 239 14-3-3 family AT4G09000 72.7 5.6e-92 334.7
Cmetu03g0585 . 4 239 14-3-3 family AT4G09000 71.8 8.1e-91 330.9
Cmetu04g2791 . 1 202 14-3-3 family AT4G09000 75.3 1.5e-89 326.6
Cmetu03g1289 . 5 236 14-3-3 family AT4G09000 69.7 9.9e-89 323.9
Cmetu04g0801 . 5 236 14-3-3 family AT4G09000 73.1 1.3e-88 323.6
Cmetu03g2297 . 10 238 14-3-3 family AT4G09000 64.2 7.9e-78 287.7
Cmetu03g2141 . 6 251 14-3-3 family AT1G78300 86.7 3.1e-117 418.3
Cmetu07g1402 . 6 253 14-3-3 family AT1G78300 86.7 1.2e-116 416.4
Cmetu04g2206 . 11 247 14-3-3 family AT1G78300 75.9 1.3e-99 359.8
Cmetu01g2437 . 7 247 14-3-3 family AT1G78300 71.2 6.4e-94 340.9
Cmetu03g0585 . 8 257 14-3-3 family AT1G78300 70.6 5.4e-93 337.8
Cmetu10g0316 . 8 260 14-3-3 family AT1G78300 70.6 9.2e-93 337.0
Cmetu03g1289 . 1 250 14-3-3 family AT1G78300 67.5 3.9e-91 331.6
Cmetu04g0801 . 1 243 14-3-3 family AT1G78300 69.4 4.7e-89 324.7
Cmetu04g2791 . 1 196 14-3-3 family AT1G78300 77.3 1.4e-88 323.2
Cmetu03g2297 . 11 238 14-3-3 family AT1G78300 64.9 1.3e-78 290.0
Cmetu07g1402 . 6 259 14-3-3 family AT5G38480 89.8 4.9e-123 437.6
Cmetu03g2141 . 6 242 14-3-3 family AT5G38480 83.0 1.7e-107 386.0
Cmetu04g2206 . 10 251 14-3-3 family AT5G38480 73.1 2.7e-97 352.1
Cmetu10g0316 . 8 255 14-3-3 family AT5G38480 73.6 2.8e-94 342.0
Cmetu01g2437 . 7 247 14-3-3 family AT5G38480 72.0 6.9e-93 337.4
Cmetu03g0585 . 8 255 14-3-3 family AT5G38480 72.0 9.0e-93 337.0
Cmetu03g1289 . 5 247 14-3-3 family AT5G38480 71.4 7.6e-92 334.0
Cmetu04g0801 . 5 248 14-3-3 family AT5G38480 71.1 1.8e-88 322.8
Cmetu04g2791 . 1 206 14-3-3 family AT5G38480 71.5 1.4e-85 313.2
Cmetu03g2297 . 10 238 14-3-3 family AT5G38480 65.5 1.8e-77 286.2
Cmetu07g1402 . 3 240 14-3-3 family AT1G35160 86.2 7.7e-112 400.6
Cmetu03g2141 . 3 232 14-3-3 family AT1G35160 86.7 2.9e-111 398.7
Cmetu04g2206 . 11 246 14-3-3 family AT1G35160 76.7 8.9e-100 360.5
Cmetu01g2437 . 2 237 14-3-3 family AT1G35160 71.0 4.0e-92 335.1
Cmetu10g0316 . 8 239 14-3-3 family AT1G35160 73.5 1.5e-91 333.2
Cmetu03g0585 . 8 239 14-3-3 family AT1G35160 72.6 1.3e-90 330.1
Cmetu03g1289 . 5 236 14-3-3 family AT1G35160 69.7 5.4e-89 324.7
Cmetu04g0801 . 5 236 14-3-3 family AT1G35160 73.1 1.6e-88 323.2
Cmetu04g2791 . 1 196 14-3-3 family AT1G35160 76.4 6.0e-88 321.2
Cmetu03g2297 . 1 238 14-3-3 family AT1G35160 63.4 4.3e-78 288.5
Cmetu07g1402 . 4 254 14-3-3 family AT5G16050 86.1 2.5e-117 418.7
Cmetu03g2141 . 3 243 14-3-3 family AT5G16050 76.5 1.9e-101 365.9
Cmetu04g2206 . 10 248 14-3-3 family AT5G16050 70.3 1.1e-91 333.6
Cmetu10g0316 . 3 246 14-3-3 family AT5G16050 65.9 1.9e-85 312.8
Cmetu03g0585 . 3 246 14-3-3 family AT5G16050 66.3 2.5e-85 312.4
Cmetu01g2437 . 1 246 14-3-3 family AT5G16050 65.1 1.6e-84 309.7
Cmetu03g1289 . 2 247 14-3-3 family AT5G16050 64.9 2.8e-84 308.9
Cmetu04g0801 . 5 242 14-3-3 family AT5G16050 66.7 4.9e-81 298.1
Cmetu04g2791 . 1 208 14-3-3 family AT5G16050 67.6 5.6e-77 284.6
Cmetu03g2297 . 10 238 14-3-3 family AT5G16050 61.6 3.2e-72 268.9
Cmetu04g2206 . 9 246 14-3-3 family AT5G10450 84.9 1.8e-110 396.0
Cmetu07g1402 . 4 259 14-3-3 family AT5G10450 73.5 3.6e-103 371.7
Cmetu03g2141 . 3 241 14-3-3 family AT5G10450 74.4 1.7e-97 352.8
Cmetu03g2297 . 9 238 14-3-3 family AT5G10450 77.0 4.4e-93 338.2
Cmetu01g2437 . 1 238 14-3-3 family AT5G10450 68.0 1.9e-88 322.8
Cmetu03g1289 . 5 236 14-3-3 family AT5G10450 67.2 3.3e-85 312.0
Cmetu10g0316 . 3 239 14-3-3 family AT5G10450 66.3 4.8e-84 308.1
Cmetu03g0585 . 3 239 14-3-3 family AT5G10450 65.4 2.4e-83 305.8
Cmetu04g0801 . 5 236 14-3-3 family AT5G10450 67.7 3.1e-83 305.4
Cmetu04g2791 . 1 196 14-3-3 family AT5G10450 67.8 2.6e-77 285.8
Cmetu07g1402 . 6 260 14-3-3 family AT3G02520 92.6 4.0e-128 454.5
Cmetu03g2141 . 6 242 14-3-3 family AT3G02520 84.3 1.7e-110 396.0
Cmetu04g2206 . 10 248 14-3-3 family AT3G02520 74.9 3.9e-99 358.2
Cmetu10g0316 . 8 256 14-3-3 family AT3G02520 69.6 8.5e-94 340.5
Cmetu03g0585 . 8 257 14-3-3 family AT3G02520 69.4 3.2e-93 338.6
Cmetu03g1289 . 1 249 14-3-3 family AT3G02520 69.4 2.1e-92 335.9
Cmetu01g2437 . 1 238 14-3-3 family AT3G02520 71.3 4.0e-91 331.6
Cmetu04g0801 . 1 241 14-3-3 family AT3G02520 71.6 9.8e-90 327.0
Cmetu04g2791 . 1 195 14-3-3 family AT3G02520 76.8 4.5e-87 318.2
Cmetu03g2297 . 10 238 14-3-3 family AT3G02520 66.8 4.1e-80 295.0
Cmetu04g2206 . 9 246 14-3-3 family AT5G65430 84.5 2.0e-111 399.1
Cmetu07g1402 . 7 241 14-3-3 family AT5G65430 79.2 1.5e-103 372.9
Cmetu03g2141 . 8 232 14-3-3 family AT5G65430 78.0 1.1e-96 350.1
Cmetu03g2297 . 9 255 14-3-3 family AT5G65430 73.4 1.5e-95 346.3
Cmetu01g2437 . 1 238 14-3-3 family AT5G65430 69.7 7.3e-90 327.4
Cmetu03g1289 . 5 236 14-3-3 family AT5G65430 68.9 2.2e-86 315.8
Cmetu10g0316 . 8 239 14-3-3 family AT5G65430 69.8 2.9e-86 315.5
Cmetu03g0585 . 8 239 14-3-3 family AT5G65430 68.5 9.3e-85 310.5
Cmetu04g0801 . 5 236 14-3-3 family AT5G65430 69.4 1.6e-84 309.7
Cmetu04g2791 . 1 197 14-3-3 family AT5G65430 68.4 4.9e-78 288.1
Cmetu01g2437 . 1 261 14-3-3 family AT2G42590 81.7 4.0e-118 421.4
Cmetu10g0316 . 6 257 14-3-3 family AT2G42590 76.3 8.6e-105 377.1
Cmetu03g1289 . 3 242 14-3-3 family AT2G42590 77.5 2.8e-103 372.1
Cmetu03g0585 . 6 253 14-3-3 family AT2G42590 75.4 1.0e-102 370.2
Cmetu04g0801 . 3 245 14-3-3 family AT2G42590 76.1 8.9e-102 367.1
Cmetu07g1402 . 8 248 14-3-3 family AT2G42590 72.6 3.2e-91 332.0
Cmetu03g2141 . 8 238 14-3-3 family AT2G42590 68.9 3.1e-86 315.5
Cmetu04g2206 . 11 248 14-3-3 family AT2G42590 65.5 9.2e-83 303.9
Cmetu04g2791 . 1 195 14-3-3 family AT2G42590 62.3 2.4e-67 252.7
Cmetu03g2297 . 11 238 14-3-3 family AT2G42590 55.7 4.0e-62 235.3
Cmetu03g1289 . 1 241 14-3-3 family AT1G22300 79.7 8.6e-104 373.6
Cmetu10g0316 . 5 244 14-3-3 family AT1G22300 78.3 1.5e-103 372.9
Cmetu01g2437 . 6 242 14-3-3 family AT1G22300 78.1 4.3e-103 371.3
Cmetu03g0585 . 5 244 14-3-3 family AT1G22300 76.7 1.8e-101 365.9
Cmetu04g0801 . 1 241 14-3-3 family AT1G22300 77.6 9.8e-100 360.1
Cmetu07g1402 . 5 246 14-3-3 family AT1G22300 70.7 2.2e-91 332.4
Cmetu03g2141 . 8 236 14-3-3 family AT1G22300 69.0 5.8e-84 307.8
Cmetu04g2206 . 11 248 14-3-3 family AT1G22300 65.5 1.0e-80 297.0
Cmetu04g2791 . 1 195 14-3-3 family AT1G22300 61.0 9.3e-66 247.3
Cmetu03g2297 . 11 238 14-3-3 family AT1G22300 56.1 2.6e-60 229.2
Cmetu03g1289 . 1 245 14-3-3 family AT1G34760 80.8 2.7e-105 378.6
Cmetu01g2437 . 6 246 14-3-3 family AT1G34760 80.5 3.5e-105 378.3
Cmetu10g0316 . 5 245 14-3-3 family AT1G34760 81.3 6.0e-105 377.5
Cmetu03g0585 . 5 247 14-3-3 family AT1G34760 79.4 6.6e-104 374.0
Cmetu04g0801 . 1 244 14-3-3 family AT1G34760 78.7 1.3e-99 359.8
Cmetu07g1402 . 5 250 14-3-3 family AT1G34760 71.5 3.2e-90 328.6
Cmetu03g2141 . 8 235 14-3-3 family AT1G34760 70.2 2.9e-83 305.4
Cmetu04g2206 . 11 247 14-3-3 family AT1G34760 63.7 1.5e-79 293.1
Cmetu04g2791 . 1 196 14-3-3 family AT1G34760 61.6 1.6e-65 246.5
Cmetu03g2297 . 11 238 14-3-3 family AT1G34760 55.3 2.2e-59 226.1
Cmetu10g0316 . 2 254 14-3-3 family AT1G26480 87.0 7.7e-119 423.7
Cmetu03g0585 . 2 254 14-3-3 family AT1G26480 85.8 8.6e-118 420.2
Cmetu01g2437 . 3 242 14-3-3 family AT1G26480 80.4 1.0e-107 386.7
Cmetu03g1289 . 2 249 14-3-3 family AT1G26480 76.2 9.2e-104 373.6
Cmetu04g0801 . 3 242 14-3-3 family AT1G26480 78.3 4.3e-101 364.8
Cmetu07g1402 . 2 256 14-3-3 family AT1G26480 72.0 2.8e-92 335.5
Cmetu03g2141 . 8 250 14-3-3 family AT1G26480 70.1 9.2e-88 320.5
Cmetu04g2206 . 11 244 14-3-3 family AT1G26480 67.5 3.4e-82 302.0
Cmetu04g2791 . 1 195 14-3-3 family AT1G26480 64.9 2.8e-68 255.8
Cmetu03g2297 . 11 238 14-3-3 family AT1G26480 55.7 1.1e-61 233.8
Cmetu10g0316 . 5 237 14-3-3 family AT1G78220 53.4 7.0e-66 247.7
Cmetu03g1289 . 1 234 14-3-3 family AT1G78220 51.5 1.1e-63 240.4
Cmetu01g2437 . 6 236 14-3-3 family AT1G78220 50.9 2.5e-63 239.2
Cmetu03g0585 . 5 237 14-3-3 family AT1G78220 50.9 2.1e-62 236.1
Cmetu04g0801 . 1 234 14-3-3 family AT1G78220 50.2 8.8e-61 230.7
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0017361 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2