Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmetu07g0697 ATGGAAAGAACGCTATCGTTTTCAGTGGCTTCGGTGGTGGAGGATGTGCTTCAACAGCATGGGAATCGTCTTGGTAATGGAGGAGGAGGACTTGATTTGGAATCTAGAAGAGCTGAGGAAGCTGCATCTAGAAGAAATGAAGCCGCCGGGTGGTTGAGAAGGATGATCGGGGTTGTTGCTGCTAAAGATTTGCCAGCTGAGCCTTCAGAGGAAGAGTTTAGGCTTGGATTGAGAAGTGGGATTATTCTCTGCAATGTCCTCAATAAGGTTCAACCAGGAGCGGTTCCCAAGGTGGTTGAGAGCCCTTGTGATTCTGCTCTCATCCCTGATGGAGCTGCACTCTCAGCATTTCAATATTTTGAGAACGTGAGGAATTTTCTTGTAGCTATACAAGAGATGGGAGTTCCTACCTTTGAGGCATCTGATCTAGAGCAAGGAGGGAAATCTGCCAGGGTTGTCAATACTGTTCTGGCTCTTAAATCTTATGGCGAGTGGAAACAGGGTGGAGGCTATGGAGTTTGGAAATTCGGTGGAAATGTAAAACCCACTACTACTATGTCCGCTACTAAGTCCTTTGTGAGGAAAAATTCAGAGCCATTCACAAATTCCTTGTCAAGAACCTCCTCTCTGAATGACAAATCTTTCAATTCTTCCAACGCCGAATGGAACAAAACGAATGGTTCTCGCGCCGCGCTCATTCGTGCACTTTTAACAGATAAAAGGCCTGAAGAAATTCCAACGTTTGTAGAATCATTGTTAAGCAAGCTTGTGGATGAAGTTGAGAATCGCTTCTCCAGCCTTGATCTGACAAAATCTACTCCAAAAGATGTGGTTTTGGCTAGTTCACAAAGCAACAAGTCGCTCTTGAAATCAGCTTTTGGTGCCAAAAGGGCAGAGGAACCTAACTCCAAAGCGATGGAAAAGAATGAAATAATCCATGAAAGCAGTATATTTGAGGAGCAATCAAAGAGCTTGCTCCTGAAGCAGCAAGTGATTTTCGATCAGCAGCAAAAGGATGTTCAGGAACTAAAACATAAACTGCACGCTGCAAAAGCTGGAATGCAATTTATGCAAGTAAAATTTAGTGAAGAGTTCCACAACCTCGGTATGCATGTACATAGTCTTGCTCACGCTGCATCTGGATATCATAAAGTTCTCGAGGAAAATCGTAAGCTATACAATCAAGTGCAGGATCTCAAGGGTAGCATAAGAGTTTACTGCCGAGTTAGACCCTTTTTGTCTGGCCAATCAAATTATTTGAGTGTTGTGGATAACATAGAAGATGGAAACATTACTGTTAACGCTCCCTCAAAACATGGGAAGGGACAGAGATCCTTCAGCTTCAATAAAGTATTTGGTCCATCTGCTACACAAGTGGAGGTCTTTGCCGATATGCAGCCACTCATTCGATCTGTTCTTGATGGATACAATGTTTGTATTTTTGCATATGGGCAAACAGGATCAGGGAAAACTTTTACTATGTCTGGGCCAAAAGAGCTAACAGAGAAGAGCCAAGGAGTAAATTATAGAGCATTGGGAGATTTGTTCCTTATAGCAGATCAAAGAAAGGAGACCTATCGTTATGATGTTTCTGTTCAGATGATTGAGATTTATAATGAGCAAGTGCGGGATCTCCTTGTCACTGATGGATCTAATAAAAGATTAGAAATTCGAAATAGTTCTCAAAATGGACTTAGTGTACCAGATGCTAATCTTGTAAGTGTGTCGTCAACTTTGGATATCATTAGTCTAATGAACCTTGGCCAAAGGAATCGTGCTGTAGGGGCGACAGCTCTAAATGACCGTAGTAGCCGTTCCCATAGTTGTTTGACGGTTCACGTTCAAGGAAGAGATCTGACATCTGGAGCAATTCTCCGTGGCTGCATGCATCTTGTAGATTTGGCAGGAAGTGAGAGGGTCGACAAGTCTGAGGTGACTGGAGATAGACTGAAAGAAGCACAACATATCAACAAGTCCCTTTCTGCTCTAGGTGATGTTATTGCTTCTCTTGCCCAGAAGAATCCCCACGTCCCTTACAGAAATAGCAAATTGACACAACTTCTTCAAGATTCACTTGGTGGGCAAGCCAAGACATTGATGTTTGTTCACATCAGCCCAGAACCTGATGCTATTGGAGAGACATTAAGTACACTTAAATTTGCAGAGAGAGTTGCAACAGTCGAACTCGGTGCTGCTAGAGTGAACAAAGATACTTCAGATGTTAAAGAGCTCAAGGAACAGGTTGCAAGTTTAAAGGCAGCACTTGCAAGAAAAGAGGGGGCACAACAACATACTCCACTTCCAGCTTCTGGGAACTCTGAGAAATTCAAGACAAAAGCAAATGAGCTATCACCTTTCCGGCCTAAAAGTCAGGATGTAGATGTGTTGATTGAACATACTATCCGCCGTCAGCCTATGGGCGATGTAGGCAACATTGAGCTTCATAATAACTCTGCAATAAGACAGAAGAGGCAGAGCTTTGACATGGATGAACTGTTGGCCAATTCACCTCCATGGCCGCCCGTCAGTAGCCCTTGCCTGAACTACAGGGAGGACGATAAAGACACTGCCTCAGGTGAATGGGTTGACAAAGTAATGGTGAACAAGCAAGACGTTAACCAAATCGAGAATCCATTAGGATGCTGGGAAGCAGAAAATGGTAACTTAAATGACATCTTCTACCAGAAATATCTTCAAGACTCCTCCAAACTGTATACAGAACAAGGATACAGTATGTTAACTGGAGCCAACCGATTTAACATGGTTGGCATTGACGATATAGACGATCTAGATGCTGGAACAAGCGACTCTTCTGAACCAGATTTGCTTTGGCAGTTCAACCAGTCTAAACTTACAAGTATAAGCAGCGGAATCGGATCGAAAACGAAGAAACCGAACAGTGGAAAGCCAGTAAAGAGCCCAGAGTTAAGCAAGAACTTCAGTTCTTCAATGGGACCTTCTCCTTCACAGAAGATATCAAATGGGGTTGCTCTCCCACTGCACAGAAATGGGAGACAGCCTACTTCTGCTGATAACAAACGCAGAACTGGAAATAGAAAACAGTAA 3066 43.25 MERTLSFSVASVVEDVLQQHGNRLGNGGGGLDLESRRAEEAASRRNEAAGWLRRMIGVVAAKDLPAEPSEEEFRLGLRSGIILCNVLNKVQPGAVPKVVESPCDSALIPDGAALSAFQYFENVRNFLVAIQEMGVPTFEASDLEQGGKSARVVNTVLALKSYGEWKQGGGYGVWKFGGNVKPTTTMSATKSFVRKNSEPFTNSLSRTSSLNDKSFNSSNAEWNKTNGSRAALIRALLTDKRPEEIPTFVESLLSKLVDEVENRFSSLDLTKSTPKDVVLASSQSNKSLLKSAFGAKRAEEPNSKAMEKNEIIHESSIFEEQSKSLLLKQQVIFDQQQKDVQELKHKLHAAKAGMQFMQVKFSEEFHNLGMHVHSLAHAASGYHKVLEENRKLYNQVQDLKGSIRVYCRVRPFLSGQSNYLSVVDNIEDGNITVNAPSKHGKGQRSFSFNKVFGPSATQVEVFADMQPLIRSVLDGYNVCIFAYGQTGSGKTFTMSGPKELTEKSQGVNYRALGDLFLIADQRKETYRYDVSVQMIEIYNEQVRDLLVTDGSNKRLEIRNSSQNGLSVPDANLVSVSSTLDIISLMNLGQRNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGAILRGCMHLVDLAGSERVDKSEVTGDRLKEAQHINKSLSALGDVIASLAQKNPHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPDAIGETLSTLKFAERVATVELGAARVNKDTSDVKELKEQVASLKAALARKEGAQQHTPLPASGNSEKFKTKANELSPFRPKSQDVDVLIEHTIRRQPMGDVGNIELHNNSAIRQKRQSFDMDELLANSPPWPPVSSPCLNYREDDKDTASGEWVDKVMVNKQDVNQIENPLGCWEAENGNLNDIFYQKYLQDSSKLYTEQGYSMLTGANRFNMVGIDDIDDLDAGTSDSSEPDLLWQFNQSKLTSISSGIGSKTKKPNSGKPVKSPELSKNFSSSMGPSPSQKISNGVALPLHRNGRQPTSADNKRRTGNRKQ 1021
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 880127 886611 - PI0026929.1 Cmetu07g0697 361178

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmetu07g0697 1021 SMART ch_5 44 162 IPR001715 GO:0005515
Cmetu07g0697 1021 CDD CH_AtKIN14-like 44 161 - -
Cmetu07g0697 1021 MobiDBLite consensus disorder prediction 955 1021 - -
Cmetu07g0697 1021 FunFam Kinesin-like protein KIN-14I isoform A 29 181 - -
Cmetu07g0697 1021 PANTHER KINESIN-LIKE PROTEIN KLP-3 49 933 IPR027640 GO:0003777|GO:0007018
Cmetu07g0697 1021 SUPERFAMILY Calponin-homology domain, CH-domain 39 177 IPR036872 -
Cmetu07g0697 1021 MobiDBLite consensus disorder prediction 765 779 - -
Cmetu07g0697 1021 MobiDBLite consensus disorder prediction 756 784 - -
Cmetu07g0697 1021 CDD KISc_C_terminal 400 729 - -
Cmetu07g0697 1021 Pfam Calponin homology (CH) domain 43 164 IPR001715 GO:0005515
Cmetu07g0697 1021 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 402 760 IPR027417 -
Cmetu07g0697 1021 FunFam Kinesin-like protein KIN-14I isoform A 397 768 - -
Cmetu07g0697 1021 Coils Coil 734 761 - -
Cmetu07g0697 1021 PRINTS Kinesin heavy chain signature 597 614 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cmetu07g0697 1021 PRINTS Kinesin heavy chain signature 677 698 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cmetu07g0697 1021 PRINTS Kinesin heavy chain signature 628 646 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cmetu07g0697 1021 PRINTS Kinesin heavy chain signature 475 496 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cmetu07g0697 1021 ProSiteProfiles Calponin homology (CH) domain profile. 42 164 IPR001715 GO:0005515
Cmetu07g0697 1021 ProSiteProfiles Kinesin motor domain profile. 402 727 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cmetu07g0697 1021 Gene3D Kinesin motor domain 397 767 IPR036961 -
Cmetu07g0697 1021 SMART kinesin_4 400 735 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cmetu07g0697 1021 Gene3D - 34 164 IPR036872 -
Cmetu07g0697 1021 MobiDBLite consensus disorder prediction 955 996 - -
Cmetu07g0697 1021 Pfam Kinesin motor domain 408 726 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmetu07g0697 K27887 - - csv:101202878 1921.36
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmetu01g1245 Cmetu-Chr1:9751482 Cmetu07g0697 Cmetu-Chr7:880127 2.80E-207 dispersed
Cmetu02g0480 Cmetu-Chr2:497092 Cmetu07g0697 Cmetu-Chr7:880127 2.0e-311 dispersed
Cmetu04g1172 Cmetu-Chr4:7168903 Cmetu07g0697 Cmetu-Chr7:880127 2.00E-138 dispersed
Cmetu05g1521 Cmetu-Chr5:3359334 Cmetu07g0697 Cmetu-Chr7:880127 2.20E-84 dispersed
Cmetu06g1610 Cmetu-Chr6:30838835 Cmetu07g0697 Cmetu-Chr7:880127 2.20E-67 dispersed
Cmetu07g0697 Cmetu-Chr7:880127 Cmetu07g1914 Cmetu-Chr7:6463678 1.10E-91 dispersed
Cmetu07g0697 Cmetu-Chr7:880127 Cmetu09g1366 Cmetu-Chr9:1990674 3.60E-07 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g296 . . . Bda08g00291 . . . . Cmo08g01203 Cmo17g00316 . . . . . . . . . . . . . . Cla06g00478 Cam06g0512 Cec06g0513 Cco06g0516 Clacu06g0496 Cmu06g0498 Cre06g1269 Cone14ag0761 Cone15ag0770 . . . . Chy11g01510 . . . . . Bpe05g00836 . . . Sed02g1073 . . Cma08g01228 Cma17g00327 Car08g01104 Car17g00301 Cpe12g00278 Cpe17g00027 Bhi12g02054 Tan06g2680 Cmetu07g0697 . . . . . . . . . . . Lsi09g01431 . . Cme11g02012
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000931 3 3 4 4 4 2 4 2 2 2 2 2 4 2 2 4 2 2 4 2 2 2 3 3 2 2 2 4 4 2 82