Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmetu08g1509 ATGGATAATCTCTCACATTCTCGTCTCCCTAACAGGGGTTCTACCTCGCTTTCTAAGAAAATCTGTAATGGTAGTAATGGCGGTGGTCCTTTTGTTGCTCAAACTATCTACGACGACGTTTATGGTGGTCCTCCTAAGTTTGGAGTCTCTGCTTTGTCTCCTCGTTTTGAAGACTACGGTGAGATTTTCGGTAGCTTTCACGCGCTACGTGCTTCCTCGATTCCCATTCTTGATCTTCCTGCTGTTAATGAATCTGAGGTTTTCTTCGACGCTCGGAGCTCTGCATTCGACTATGCGGAGGTTTTTGGCGGGTTTGATGGTCTGGATTTTGCGATTTCTTATGATGAATTGGTTGGGCCTTCCAAAGGCGTTGATGATGGCTCTTCCGACGAAGCTTGGACTCCAGCAGGAACTGAATCTTTGTCAGACTGTTCGGATCATTCTGGAAATTCTCTTTGTATGTCAAATGGAGACTCTAAACAGTCGTTTGAAGAAAGCACTGAGTTTTGCATATCGTATAACAAGGTTGACCGAGAAAGCAATGGAAATATATCAAATGGGAAGATACACGTTGCCCAGTTGGAGATGCTTCCTGGATTCTCATATCTGGTTGATGAAGCAAATCCCTCGCCAAAGGCAACAGATGATGATCCGTCACTGCAGACCAATGATGATAACTATCTCAATATAGATTTTGATACAGGAAAGGTGAAGGGCAAACATCCAAGGAACACTATGCCACTCCTAGTGGACAGTAATGACTCTGGACCATTATTTGAGGATAACCCTATTTCTCAAAATGGATATGGTAGAGGTGTCTGTCGTTTTCACGAGGATTTCATAACTGTATCTGAAATAAGCCTTAGAACTGAACCCTCGCAAGTGCCACCACCTGCTCGACCTCCTCCCAAGTTTGCTACCAAAAAGAGGGACTACACTAGAAGGACTTTGAGTTGTAGGGAAGCTGCTTCTGAATTAATTTCGGACGATCTTACTCTTCCTTTATATGATGTGGAGGTAGATGCTAGCTCATCTGCTGCGGCCTCTGCTGCAGCTATTAAAGAAGCAATGGAAAAAGCTCAAGCACAGTTACAAAATGCAAAAGATTTGTGGAAGAGGAAGAAGGAAGGGGTCCATGGAAGGATGAGACTGGACTCGAAAAATGATATGAGAGAAAAGGATGAGAAATTGTCGAAGATTCCAAATCGACTTAGGACTTTGGCCAATGAAAGTGGGCTGGGTGCTGGGGAAATTCATGGCCATGAGATGAATTTGTCTGCCAGAGAGGAGAGGCAAAAGGATGTGAGGGCAACCGAAGTTTGTTCAGCACACTATGGAGGTGAGGAACTTTTAACAGAGGCTGAAAAGACCCTACCAATTAGAATTGGGAGTAGATTTTTTGTGTCGGAGAACCATGATTGCTGCAGCGAATGGAAAGACGCCACAGAGTTTTTTGAATTGGCAAGAGCAGATATATCCAGTAGGGAATTTGAGTCGGTGAACAATCATGCAATTTCTAACTTTGTGACTGCACAAATGGGAGTAGAAACCAACAATGCATGGGAGAACGATAAAGATCAAGACAAGAAAGTAAACCCATTCCATACAGCTCACGTTCTGAATGAGGAAGTGAAGAATTTGGAGAAAATGGCTCATGGAAAGAAGGAAGATAAGATAAAACTGAAGCCAAATAAAAACCAAACTAGGCAAAAAGAGCAGGTGAAATTAAAAATTCACCAAGGTGTTTGTGATCTTGAAGCAAATGATAGGAAATTTGGAGTTGCTCAAGGGGTTATGGAAATTAAAAAGCAAATGGGTTGTGCTAGCGATCCGGAGAAATGTGAAAAGCCTATGGAGTTTCGACAATTGGACAGTGAGCTAAAGGTTGAGCAACCACCTGTTTCACCAAGGGATATTGAACAAGAAAAGAAAAAGGTTGTTGAAAGAAAGGAAAATGGAAATAGTCTCGAGGAATCTCATATAAAAGAAAACAATGCAAATAAAATGGAAGCCACTGAGAATGAGAAAAGAGAGATGTTCCCAGAGGCTTCTGAAAGGGAAAAAGTTGAGCAAAAAATGAGGATGTTCCTTGAGCAACCGGAAGATAAGAAAAGACCGAATTTGGTGCTTGAGGATGAAAACTTTATGGGACGGATGGCTTGTGAAAGACAACTGGAAGGAGTTCATGAGATGGAAGATCATGGGGAAAAGGAAAAAGAGGCTGCCAAAGTTGGAGTAAGTGAGAGACCTGAGTTAGCTCATGAGATAGAAGATGACAACAAATGGGCACAGGATTTTCAGTACAGAGAAGTATGTGAAAAAGGAGTTGATGATTCATTTCAGCATTTGAATATTGAAGAGATGCCAAGAGATGTGGGTAGGTGTAAAGTGACTTCGATGCTGGTTAAAGATTCACAAGATAGTACAGATCTCAATGGTACAAGTCCGGAGGATGATGGATTAAAGAGATTGGACAACAGACACAAAGTAAATTCAACAATAGAATCTCAAGTGCATGATTTGGGGATATCTGCTGCTGCACTTCAAATGAAATATGACAAAGACTACATACCCATTGAATTAGCATGTCCAAGAGGAATGTCCGAAGAATTCTCTGTTGTAGATGAAAGTGGAGAGCGAAAGACTACAGTTATAGTTAATGAAAATCTTGAATTTAACAAAAATCCATTTGTGCCGGGTGTGTGCCAGCCAAAGGTAGAACACCATAAATTTCTTGTTGAAATGGAAGATGCAGATATACAACTTTCTTTCGATGAATTGATTAGAAGAGCAGCCAAAGAAACACAATTTCAATCCGAAATTGAACATACACAATCAGAACCAACTAACTCGGAAGACAGACTTTCATCTGAAAACTCAACAAGCATGGACGAGGGAGAGAACATAGACAAGATGGAAGATATGAAATCATCACTTCCTCTGGATAGAAGTGATGAGAAGGCAGGCCAGGCTGATGTTTGCATTGAAGGGTTTGTAGGGAGAAAGAAGTTCGTTACCGGAATGGGTTCTGTTCCTGAACATCCAGAAAGTAACTTGTTCTGTTGTATGGAAGATAGAGGGAAGTCCTCTGACCAGGTTGAAGATAAGGGACAAAAAGCGCCAGTTCAGGGGGTCAATGTAAGGGCTGAGAAAGGAAGTGGATTGAAGTCAACACGGCAAAATATTTCAGAAAGGACACGGAAGAGTGGGGAATTCTCCTGTGAGGTCAATGCAAATCAGGCCCCAGAAAGAAAGGAAAAGATTGTAAACCAGAGCCATACATCTAAAGGAAAAGAGAGTGAGAGAGCAAGGAGTGAAGCAGAATTTGAGAATGACACTCTTCGAAAATTGGAAGAAGAGAGGGAAAGGGAGAGAGAGAGAGAGAAGGATAGAATGCCTATTGACAGGATTTCTCTTGAACCACGAGATAGAGTAGGTGCTGAAGCTCGTGAAAGGGTAGAAAGGGCTGCTCTGGAGAGGATGACTGCCGAAGCCCGACAAAGAGCATTGGCTGACGCACGTGAAAGATTGGAAAAGGCATGTGCAGAGGCGAGAGAAAATTCATTGGCTGGGAAGGCAGCAACTATGGAGGCAAGGGTAAAGGCAGAGCGTGCAGCTGTAGAAAGAGCAACTGCAGAGGCCAGGGAGCGAGCTTCGGAGAAAGCCAAGTCTGACAAGACTTCTTTTGGGGTGAGAGAGAGAATGGAAAGATCTGTTTCTGACAAATTCTCTGCTTCTTCCAGAAATAACGAAATGAGACAGAAGTCTTCGTCCTTCGTTCAGCCTAGCCTACAATCTCAGAGCTTTGGCCCTGCCACTGCTTCAAGATATGCCTACTACTCGGCTTATGATGAGCGGAATGAGGGTGTTGATGGTGAATCACCTCAAAGGTGTAAAGCCAGATTAGAGAGGCATCAAAGAACAGCAGAACGTGCAGCAAAAGCTCTGGCAGAAAAAAATATGCGTGATCTTCTGGCCCAAAGAGAGCAAGCTGAGAGAAATAGATTAGCTGAGACATTGGATGCTGATGTTAGGAGATGGTCAAGTGGGAAGGAAGGGAACTTGCGTGCATTGCTTTCTACATTGCAATACATCCTTGGACCTGATAGCGGTTGGCAGCCAATCCCCTTAACGGAAGTTATAACTGCCGTTGCTGTAAAGAAAGCTTACAGGAAAGCCACTCTGTGTGTTCATCCAGACAAATTGCAACAACGGGGTGCAAGTATTCAGCAAAAGTATATATGCGAGAAGGTCTTTGATCTACTAAAGGAAGCTTGGAACAAATTCAACTCAGAAGAGCGGTAG 4305 42.9 MDNLSHSRLPNRGSTSLSKKICNGSNGGGPFVAQTIYDDVYGGPPKFGVSALSPRFEDYGEIFGSFHALRASSIPILDLPAVNESEVFFDARSSAFDYAEVFGGFDGLDFAISYDELVGPSKGVDDGSSDEAWTPAGTESLSDCSDHSGNSLCMSNGDSKQSFEESTEFCISYNKVDRESNGNISNGKIHVAQLEMLPGFSYLVDEANPSPKATDDDPSLQTNDDNYLNIDFDTGKVKGKHPRNTMPLLVDSNDSGPLFEDNPISQNGYGRGVCRFHEDFITVSEISLRTEPSQVPPPARPPPKFATKKRDYTRRTLSCREAASELISDDLTLPLYDVEVDASSSAAASAAAIKEAMEKAQAQLQNAKDLWKRKKEGVHGRMRLDSKNDMREKDEKLSKIPNRLRTLANESGLGAGEIHGHEMNLSAREERQKDVRATEVCSAHYGGEELLTEAEKTLPIRIGSRFFVSENHDCCSEWKDATEFFELARADISSREFESVNNHAISNFVTAQMGVETNNAWENDKDQDKKVNPFHTAHVLNEEVKNLEKMAHGKKEDKIKLKPNKNQTRQKEQVKLKIHQGVCDLEANDRKFGVAQGVMEIKKQMGCASDPEKCEKPMEFRQLDSELKVEQPPVSPRDIEQEKKKVVERKENGNSLEESHIKENNANKMEATENEKREMFPEASEREKVEQKMRMFLEQPEDKKRPNLVLEDENFMGRMACERQLEGVHEMEDHGEKEKEAAKVGVSERPELAHEIEDDNKWAQDFQYREVCEKGVDDSFQHLNIEEMPRDVGRCKVTSMLVKDSQDSTDLNGTSPEDDGLKRLDNRHKVNSTIESQVHDLGISAAALQMKYDKDYIPIELACPRGMSEEFSVVDESGERKTTVIVNENLEFNKNPFVPGVCQPKVEHHKFLVEMEDADIQLSFDELIRRAAKETQFQSEIEHTQSEPTNSEDRLSSENSTSMDEGENIDKMEDMKSSLPLDRSDEKAGQADVCIEGFVGRKKFVTGMGSVPEHPESNLFCCMEDRGKSSDQVEDKGQKAPVQGVNVRAEKGSGLKSTRQNISERTRKSGEFSCEVNANQAPERKEKIVNQSHTSKGKESERARSEAEFENDTLRKLEEEREREREREKDRMPIDRISLEPRDRVGAEARERVERAALERMTAEARQRALADARERLEKACAEARENSLAGKAATMEARVKAERAAVERATAEARERASEKAKSDKTSFGVRERMERSVSDKFSASSRNNEMRQKSSSFVQPSLQSQSFGPATASRYAYYSAYDERNEGVDGESPQRCKARLERHQRTAERAAKALAEKNMRDLLAQREQAERNRLAETLDADVRRWSSGKEGNLRALLSTLQYILGPDSGWQPIPLTEVITAVAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER 1434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 21727677 21733443 + PI0000264.1 Cmetu08g1509 364320

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmetu08g1509 1434 MobiDBLite consensus disorder prediction 938 957 - -
Cmetu08g1509 1434 MobiDBLite consensus disorder prediction 289 312 - -
Cmetu08g1509 1434 Gene3D DnaJ domain 1307 1434 IPR036869 -
Cmetu08g1509 1434 MobiDBLite consensus disorder prediction 935 970 - -
Cmetu08g1509 1434 Coils Coil 1100 1131 - -
Cmetu08g1509 1434 Coils Coil 537 557 - -
Cmetu08g1509 1434 SUPERFAMILY Chaperone J-domain 1290 1433 IPR036869 -
Cmetu08g1509 1434 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 6 1434 - -
Cmetu08g1509 1434 MobiDBLite consensus disorder prediction 1 21 - -
Cmetu08g1509 1434 Coils Coil 1193 1213 - -
Cmetu08g1509 1434 ProSiteProfiles dnaJ domain profile. 1370 1434 IPR001623 -
Cmetu08g1509 1434 Coils Coil 1163 1187 - -
Cmetu08g1509 1434 MobiDBLite consensus disorder prediction 1242 1268 - -
Cmetu08g1509 1434 MobiDBLite consensus disorder prediction 1211 1268 - -
Cmetu08g1509 1434 MobiDBLite consensus disorder prediction 1211 1241 - -
Cmetu08g1509 1434 MobiDBLite consensus disorder prediction 1051 1147 - -
Cmetu08g1509 1434 MobiDBLite consensus disorder prediction 625 663 - -
Cmetu08g1509 1434 Coils Coil 350 374 - -
Cmetu08g1509 1434 Coils Coil 1299 1334 - -
Cmetu08g1509 1434 MobiDBLite consensus disorder prediction 1080 1147 - -
Cmetu08g1509 1434 FunFam Auxilin-related protein 1 1305 1434 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmetu08g1509 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmetu03g1597 Cmetu-Chr3:11985424 Cmetu08g1509 Cmetu-Chr8:21727677 1.30E-48 dispersed
Cmetu04g1109 Cmetu-Chr4:28428744 Cmetu08g1509 Cmetu-Chr8:21727677 2.70E-15 dispersed
Cmetu08g0004 Cmetu-Chr8:12434581 Cmetu08g1509 Cmetu-Chr8:21727677 6.00E-57 dispersed
Cmetu08g1509 Cmetu-Chr8:21727677 Cmetu12g1930 Cmetu-Chr12:6646987 3.40E-27 dispersed
Cmetu04g2517 Cmetu-Chr4:29093638 Cmetu08g1509 Cmetu-Chr8:21727677 1.90E-70 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g999 Blo04g00910 Blo16g00053 . . Bpe15g00422 Bpe13g00437 . . . . . Cma07g00477 Car03g00673 Car07g00420 Sed14g1132 Cpe19g00817 Cpe10g00623 Bhi03g01324 Tan03g1999 Cmetu08g1509 . . . . Cla01g01920 . . . Clacu01g2027 Cmu01g1902 . . Cone12ag0778 Cone6ag1638 Cone9ag1558 Lsi01g00666 . . Cme08g00860 . . Bda11g01857 . . . Bma03g00985 Bma06g00115 . . Cmo07g00477 . . . . . . . . . . . . . . . . . . . . . Csa06g03256 Chy02g00633 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004571 1 2 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 2 41