Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmetu08g1687 ATGTTACAAACCTACAGCAAGTTCAGTTTCAGGATACCCATTTCACCTTCCATTCTTATCCCCATCTTCTTCCTTTTCCTCTCTCTTCCTGCATATGCCGATGACGGATGGTGGGAAGGAGACAGTCCTGTGGTGAAGAGAGCCAATGAAAGAATCCCGCTTCTTAAAACAGAGTACGGTGAGATCTCCGCCGTTGATTTCGACGATGGCTCTCGATTTGGACCTTACCATCTTCAGTTCATCACATTGGAACCAAATTCACTGTTTCTTCCTGTTCTTCTTCATTCTGATTTGGTGTTCTATATCCACACTGGAAGTGGGAGATTGAATTGGTTTGATGACAAGGATTTGAAGGAGGTGGATTTACGGCGGGGAGATCTTTATAGGCTTCATCCAGGCTCCATTTTTTACTTGCAGAGTAGCTTAGAGACCGAACGTGAAAAGCTTCGAATTTATGCTCTGTTTTCCAGCACAGATGAGGATTCATTCAATCCTTCCATTGGAGCATACTCCCGCGTCACCGATCTTGTTCGTGGCTTCGGCAAAGAAGTTCTTCGTAAAGCTTTCATGGCCCCTGATGAAGTAATAGAGGAAATAATGAACGCGAAGAGGCCGCCGCTAATCGTCCACGCTGCTGCGCCAACTCCTCGCATAAAGGCGAAGTCATCGTCGTCACCATGGGAATTTGAAGCTCGGTTATTGAAAGCTTTCCTGGGAGGAGACGCAAGTGGGACAGAATTCAACAAGAAGAAGAAGAAGAAGAAAGGCATATACAACGTTTATGAAGTAGACCCAGATTTTGAAAATTGCAATGGATGGAGTTTGAGTGTAACCAAGAAAAATTCCCATCAATTGAAAGGCTCCAACATCGGCTTCCTCGTAGTCAACCTCACAGCGGGTTCAATGATGGGTCCGCATTGGAATCCGAGGGCGTGGGAGATTGGAATTGTGACATCGGACGAGCCGGGGGTGGTTCATGTAGGGTGTTCGAGCACCTCGGCAAACAGTTCAAAATGCAAGAATTGGAGTTTTGTGGTAGAGAAAGGAGATGTATTTGTAGTGCCAAGGTTCCATCCAATGGCGCAAATGTCATTCAACAATGGAACGTTTGTATTTGTGGGATTTAGCACGACGAATGGACATAACATGCCGCAGTTTTTTGCTGGGAGTAGCTCTGTTTTGCAGATTGTGGACAGGAAAGTATTAGCATGGTCGTTTGATGTGAATGTGACAACTATTGATCGGTTGTTGGAAGCTAGGGTTGAGTCAATTATATTGGAATGTACTTCATGTGCTGAAGAGGAAGTGAGGAAAATGGAAGAGGAAGCTGAGAGAGAGAGAGAGGAGGAAGAAGAGAGAAAACGAGAAGAAGAAGAGCAAAGGAAGAGAGAGGAAGAGGAAGAGAGAAAACGAGAAGAAGAAGAGGAGCAAAGGAAGAGAGAGGAAGAGAGGAAGAGACAAGAAGAGGAAGAGAGGAAGAGACAAGAAGAGGAAGAGGAAGAGAGGAAGAGACAAGAAGAGGAAGAGGAACGGAGGAAAAGAGAGGAAGAGGAAGAGAGGAAACGGGAAGAAGAAGAAGAAGAGGAAGAGAGGAAACAGGAAGAAGAAGAAGAGAGGAAAAGAGAAGAGGAAGAAGCACAGAGAGAGGAAGAGAGGAGGAGGAGGAGAGAAGAGGAAGAGAGAGAGGAGGAGGAAGAGAGAGAAGAGGAGGAAGAAGAAGAGAGGAGGAGAAGAGAAGAGGAAGAAGAAGAAGAGAGGAGGAGAAGAGAAGAACGGGAGGCAGAGAGAGAGGAGGAGGAAGCTAGGGAGAGAGAGGAAGAGCATCAAAGAGAGAGAGGGAGGAGGCGGAGAGAGGCGGAGGAAAGACAGAGAAGACGGTGGGAGGAAGAAGAAGAAGGAGAGGAGGAGCAGGAGCAGCAGCAGCCAGTACTAAGAATTTTAGGACAGTGGACTTAA 1956 46.42 MLQTYSKFSFRIPISPSILIPIFFLFLSLPAYADDGWWEGDSPVVKRANERIPLLKTEYGEISAVDFDDGSRFGPYHLQFITLEPNSLFLPVLLHSDLVFYIHTGSGRLNWFDDKDLKEVDLRRGDLYRLHPGSIFYLQSSLETEREKLRIYALFSSTDEDSFNPSIGAYSRVTDLVRGFGKEVLRKAFMAPDEVIEEIMNAKRPPLIVHAAAPTPRIKAKSSSSPWEFEARLLKAFLGGDASGTEFNKKKKKKKGIYNVYEVDPDFENCNGWSLSVTKKNSHQLKGSNIGFLVVNLTAGSMMGPHWNPRAWEIGIVTSDEPGVVHVGCSSTSANSSKCKNWSFVVEKGDVFVVPRFHPMAQMSFNNGTFVFVGFSTTNGHNMPQFFAGSSSVLQIVDRKVLAWSFDVNVTTIDRLLEARVESIILECTSCAEEEVRKMEEEAEREREEEEERKREEEEQRKREEEEERKREEEEEQRKREEERKRQEEEERKRQEEEEEERKRQEEEEERRKREEEEERKREEEEEEEERKQEEEEERKREEEEAQREEERRRRREEEEREEEEEREEEEEEERRRREEEEEEERRRREEREAEREEEEAREREEEHQRERGRRRREAEERQRRRWEEEEEGEEEQEQQQPVLRILGQWT 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 21559263 21561796 + PI0002789.1 Cmetu08g1687 364498

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmetu08g1687 651 SMART Cupin_1_3 46 197 IPR006045 -
Cmetu08g1687 651 SMART Cupin_1_3 258 414 IPR006045 -
Cmetu08g1687 651 CDD cupin_7S_vicilin-like_N 54 211 - -
Cmetu08g1687 651 MobiDBLite consensus disorder prediction 482 520 - -
Cmetu08g1687 651 PANTHER OS03G0336100 PROTEIN-RELATED 34 431 - -
Cmetu08g1687 651 MobiDBLite consensus disorder prediction 482 651 - -
Cmetu08g1687 651 MobiDBLite consensus disorder prediction 571 630 - -
Cmetu08g1687 651 Gene3D Jelly Rolls 39 224 IPR014710 -
Cmetu08g1687 651 MobiDBLite consensus disorder prediction 534 561 - -
Cmetu08g1687 651 MobiDBLite consensus disorder prediction 442 468 - -
Cmetu08g1687 651 Coils Coil 429 637 - -
Cmetu08g1687 651 Gene3D Jelly Rolls 246 431 IPR014710 -
Cmetu08g1687 651 SUPERFAMILY RmlC-like cupins 24 420 IPR011051 -
Cmetu08g1687 651 CDD cupin_7S_vicilin-like_C 265 423 - -
Cmetu08g1687 651 Pfam Cupin 258 412 IPR006045 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmetu08g1687 - - - - 0.0
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g934 . . Bda04g00062 . . . Bma09g00063 . . . Cma03g00763 . . . Sed14g1100 . Cpe10g00599 Bhi03g01275 Tan03g1963 Cmetu08g1687 . Hepe04g1494 . . . . . . . . . . . . Cone9ag1535 Lsi01g00692 . . Cme08g00830 Blo05g00786 . . . . Bpe06g00052 . . . Cmo03g00792 . . . . . . . . . . . . . . . . . . . . . . Csa06g03224 Chy02g00664 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012868 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 28