Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmetu09g0848 ATGCAGAAGCTGTTGAGATTAAACCCTTCCTCTTCTTCCTCAGTCCCCATTCTCTGTACTGCCGTTAAACCCTTTTCCTCTCTACCTTCCAACACCACCCCCTTCATCTTTAAACCACCACACCCCCTTCTAATGTCTGCTGCTTCCTCTTTTCACACCGCCGGCGGTCCCTCTCCCTTCACCCCGGCTTCTCTTTCCAGAAACCCTTCTTCTGCTGCCGTCTCTTCCCGCTTTGCCGCCGCTACTTCGTCAAGAAATTGCTACTTGTGCAGATGCGCAGTTGATTCCCCTGCCGCATTGCGAGCTTGGGCTGTGTTCAAGGATAGTCGAAATGGGTTACGCCCGGCGTGGCTGCACACGGATTCTGATGGGTTGTTTTCTTCTTCTTTTAGTGAGGGATTGAAGAGCTCGCGAGTGAGTGTAGCTGGTGATAATGGTGGAGATGAAGATGGATTTGCCTGTGATGATGATGAAGAAGGAGAGAAGGTTTTAGAGGAAAAAGGGTCGAAGTCGAGTAGGAGGCAGAAGAGTTTGGCTGGTGGAGGCGTGTTGGTTGGTAATCCTGATTTGTTGACTATTCCAGGAGTTGGTCCAAGAAATTTGAAGAAGCTGGTAGAGAAGGGGATTGCAGGGGTGGCTGAGCTCAAGCAGTTGTATAAAGATAAGTTCTTTGGTGATTCTAGCTTGAAGATGGTTGAGTTCTTACAAAGTTCTGTTGGAATTATCCACAGAAATCATGCTGAAAGTATAACCAGTTACATAAAAGACAGTGTAGATAAGGAGTTGACTGAGGACAGTTCAAACACAGATGCAAAGTCATATCTGAAGAAACGTTTTACATTCTGTGTTGAGGGAAATATTAGTGTTGGAAAGACAACATTCCTTCAAAGAATAGCTAATGAAACTCTCGAACTACGTGACCTGGTTGAAGTGGTTCCGGAGCCTATTGACAAGTGGCAGGATATAGGACCTGACCACTTCAATATACTAAATGCTTTTTATGCCCAGCCTCAGAGATATGCATATACTTTCCAGAATTATGTATTTGTCACAAGGGTTATGCAGGAGAGAGAGTCATCTGGTGGAATCAAGCCACTCAGGTTGATGGAAAGGAGCGTTTTCAGCGACAGAATGGTGTTTGTGAGGGCTGTTCATGAAGCAAATTGGATGAATGAGATGGAGATCAGCATCTACGACTCATGGTTTGATCCAGTTGTGTCAACCTTGCCTGGGCTTATTCCTGACGGTTTCATCTATCTTAGAGCAAGCCCTGATACTTGTCATCAAAGAATGAAGTTACGTAAGAGAGCTGAAGAAGGTGGGGTCAGTTTAGAGTATCTCCGTGACTTGCACGAGAAGCATGAAAGCTGGCTGTTCCCTTTCCAAAGTGGTAACCATGGGGTTCTGTCCGTCAGTAAGCTACCATTACATCTAGACAATTCGTTACACCCTGATATCAGGGACCGTGTCTTTTTCTTGGAGGGTGACCATATGCATAGAAGTATTCAGAAGGTGCCTGCCTTGGTTCTTGATTGTGAACCAAACATTGATTTCAGCAAAGATATTGAAGCTAAGAGACAGTATGCCCGTCAAGTTGCTGAATTCTTTGCATTTGTAAAGAAGAAGAATGAAGCTTCTTCATCAACTGCTGGCCAAGACGGTGCAAATGGTTCCCAACCACAAGTAATGCTGGCAAATAAAGGTTTGTGGGTACCGGGCAGAAATCATTTCCCAGAATCAGCTCTAAAATCATTGGATTTCAGGCGGGCAATGTCTTACATGTCTGGTTAG 1791 45.11 MQKLLRLNPSSSSSVPILCTAVKPFSSLPSNTTPFIFKPPHPLLMSAASSFHTAGGPSPFTPASLSRNPSSAAVSSRFAAATSSRNCYLCRCAVDSPAALRAWAVFKDSRNGLRPAWLHTDSDGLFSSSFSEGLKSSRVSVAGDNGGDEDGFACDDDEEGEKVLEEKGSKSSRRQKSLAGGGVLVGNPDLLTIPGVGPRNLKKLVEKGIAGVAELKQLYKDKFFGDSSLKMVEFLQSSVGIIHRNHAESITSYIKDSVDKELTEDSSNTDAKSYLKKRFTFCVEGNISVGKTTFLQRIANETLELRDLVEVVPEPIDKWQDIGPDHFNILNAFYAQPQRYAYTFQNYVFVTRVMQERESSGGIKPLRLMERSVFSDRMVFVRAVHEANWMNEMEISIYDSWFDPVVSTLPGLIPDGFIYLRASPDTCHQRMKLRKRAEEGGVSLEYLRDLHEKHESWLFPFQSGNHGVLSVSKLPLHLDNSLHPDIRDRVFFLEGDHMHRSIQKVPALVLDCEPNIDFSKDIEAKRQYARQVAEFFAFVKKKNEASSSTAGQDGANGSQPQVMLANKGLWVPGRNHFPESALKSLDFRRAMSYMSG 596
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 21659911 21663355 - PI0009255.1 Cmetu09g0848 365721

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmetu09g0848 596 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 276 542 IPR027417 -
Cmetu09g0848 596 Gene3D - 280 537 IPR027417 -
Cmetu09g0848 596 CDD dNK 281 469 IPR031314 -
Cmetu09g0848 596 Pfam Deoxynucleoside kinase 281 535 IPR031314 -
Cmetu09g0848 596 PANTHER DEOXYNUCLEOSIDE KINASE 239 546 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmetu09g0848 - - - - 0.0
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1586 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Sed10g2129 . . . . . . . . Bhi06g00241 Tan10g2041 Cmetu09g0848 . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012551 0 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 29