Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmetu11g0122 ATGCAGGTGCAACTTTGTATTCCGAGTTACAAATGGAGGCGATCTTTAAAGATCTCACTGCTAATATATATGGGAATCCTCTTAGATAGCCAAAGCGATTTGAGCTTTGCCACTTCTGACATTGTAAGGAGTGCCCGTGAACAGGTCCTTGACTATCTCAAAGCATCTCCTAAAGACTACAAATGCATATTTACTTCTGGTGCAACAGCAGCACTAAAATTAGTTGGTGAAGCTTTCCCATGGAGTCACCAGAGCAGCTTTGTGTACACAATGGAGAATCATAACAGTGTTCTTGGAATCAGGGAATATGCTCTTGAACAAGGCGCTCAAGCCTATGCTGTAGATATTGAAGAAGCAGAACATGATGCATTCACAGGAAATGTTGCATCAGTGCAAGCAACAAAGCACCAAATACTAATGAGAAATGAAGCCAAGTTTCTTGATAAAGATCATACAGGCAGTGCGTATAACTTGTTTGCCTTCCCTTCAGAGTGCAATTTCTCTGGTTCGAAATTTAGCCTTGAATTGGTGAAGATTGTTAAAGAAGATTTGATTAGATATTCTGATGGCTCACCATCTCTTAAAGGACGCTGGAAGGTTTTGATCGATGCTGCAAAAGGATGTGCCACAGAACCTCCAGATTTATCCAAGTATCCTGCTGATTTTGTTGTTATCTCTTTCTATAAGCTGTTTGGGTATCCAACTGGACTTGGAGCTCTCATAGTTCATACTGATGCTGCCAAGTTATTGAAGAGAACATACTTCAGTGGAGGCACTGTTGCTGCTTCAATTGCTGACATTGACTATGTCAAACAAAGAGAGGGCGTCGAGGAGCTCTTTGAAGATGGTACAATCCCATTCCTGAGCATAGCCTCTCTATGCCATGGGTTCAAAGTTCTAAATTCTCTAACTATACCTGCAATATCTCGGCATACTTCATCACTTGCCACGTACTTGAGGAACATCCTCGTGGCCTTGAGGCATCCAAATGGAATGAGCATATGCACTATCTATGGAAGTCGCTCTTCCAAGACACTTTGTAACGAAATGGGTCCTGTAGTCTCATTCAACTTGAGACAACCAGATGGATCTTGGGTTGGACATCGAGAAGTGGAAAAACTGGCCTCTTTGTCTGGGATTCAGTTAAGGACAGGATGTTTTTGCAATCCTGGTGCATGTGCAAAATATCTTGGTCTATCTCATTCGGATCTTGCTACAAATATTGAGGCAGGTCATGTCTGCTGGGATGATTGTGATATAATTAATGGAAAACCAACTGGTGCTGTTAGAGTATCCTTGGGATACATGTCAACTTATGAAGATATCAAGAAATTCATTGATTTTGTGGCAACTTCCTTTGTCTCAACACGAACTCACGCTAGTGATGGATCACAATTTTGTGGAAGGTCAATCCATTTCGCAGACATAGGTTTTGAGAACAGATATTCAGCTTCTCGATTTGACCTGAAGTCTATTACTGTCTATCCAATCAAATCATGTGCAGGGTTCAGCATGGACAAATGGCCGTTAAGCAGTCGAGGGCTTCTTCATGATCGGGAGTGGCTACTTCAAAGCTTGACGGGTGAAACTCTTACACAGAAGAAGGTTCCTGAAATGTCACTTGTACGTACTTATATTGACCTCAGTCAGGGGATATTGTTTATTGAATCCCCACGTTGCACAGAGAGACTGCAGATCACCCTGAATTCAAGTCCTTGCAATGACAAGAGAGAACAAATAAGTTTGCATGGTCAGATATATCAAGTTCAGGGTTACGACCAGGAAGTTGATACTTGGTTTAGTGCAGCTATTGGTCGACCATGCACTTTGTTGCGCCATATGAATTCCAGTCATTGTGTCAGCTCGTGTGAGAGAGATAGTGTTGGTACCTGTAGAGAATCACGAAATCGCTTGAATTTTCCCAATGAAGCACAATTCTTGCTGATATCTGAGGAGAGTGTATCAGACCTCAATAACAGAATGAATTCCAATGCTGGAGAGGACGTTCGTAGAACATCACTTCATATTAATCCTATGAGGTTCCGGCCAAATCTTGTCATATCTGGAGGCAGACCTTATGCTGAAGATGAGTGGAGAAATATTAAAATTGGCAACAAATACTTCAGATCGTTAGGTGGATGCAACCGTTGCCAGATGATCAATTTTGTTATTGATGCTGAACAAGTCCGGAAGACAAACGAACCTTTAGCTACTTTAGCATCATACCGTAGGGTGAAGCAGGGGAAGATCTTGTTTGGGGTACTGCTGAGATATGAATGTGAGGCTGAAGAAGGGAAGACCGGTGACTTATGGCTTCAGGTTGGAGAAAGTATAATCCCAGATTGTGAGTAG 2352 42.09 MQVQLCIPSYKWRRSLKISLLIYMGILLDSQSDLSFATSDIVRSAREQVLDYLKASPKDYKCIFTSGATAALKLVGEAFPWSHQSSFVYTMENHNSVLGIREYALEQGAQAYAVDIEEAEHDAFTGNVASVQATKHQILMRNEAKFLDKDHTGSAYNLFAFPSECNFSGSKFSLELVKIVKEDLIRYSDGSPSLKGRWKVLIDAAKGCATEPPDLSKYPADFVVISFYKLFGYPTGLGALIVHTDAAKLLKRTYFSGGTVAASIADIDYVKQREGVEELFEDGTIPFLSIASLCHGFKVLNSLTIPAISRHTSSLATYLRNILVALRHPNGMSICTIYGSRSSKTLCNEMGPVVSFNLRQPDGSWVGHREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLATNIEAGHVCWDDCDIINGKPTGAVRVSLGYMSTYEDIKKFIDFVATSFVSTRTHASDGSQFCGRSIHFADIGFENRYSASRFDLKSITVYPIKSCAGFSMDKWPLSSRGLLHDREWLLQSLTGETLTQKKVPEMSLVRTYIDLSQGILFIESPRCTERLQITLNSSPCNDKREQISLHGQIYQVQGYDQEVDTWFSAAIGRPCTLLRHMNSSHCVSSCERDSVGTCRESRNRLNFPNEAQFLLISEESVSDLNNRMNSNAGEDVRRTSLHINPMRFRPNLVISGGRPYAEDEWRNIKIGNKYFRSLGGCNRCQMINFVIDAEQVRKTNEPLATLASYRRVKQGKILFGVLLRYECEAEEGKTGDLWLQVGESIIPDCE 783
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9006879 9054102 + PI0019291.1 Cmetu11g0122 368854

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmetu11g0122 783 Hamap Molybdenum cofactor sulfurase [MOCOS]. 9 780 IPR028886 GO:0006777|GO:0008265
Cmetu11g0122 783 SUPERFAMILY MOSC N-terminal domain-like 489 617 - -
Cmetu11g0122 783 ProSiteProfiles MOSC domain profile. 621 781 IPR005302 GO:0003824|GO:0030151|GO:0030170
Cmetu11g0122 783 SUPERFAMILY PK beta-barrel domain-like 636 728 IPR011037 -
Cmetu11g0122 783 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 489 778 - -
Cmetu11g0122 783 Pfam MOSC domain 637 778 IPR005302 GO:0003824|GO:0030151|GO:0030170
Cmetu11g0122 783 Pfam MOSC N-terminal beta barrel domain 488 607 IPR005303 -
Cmetu11g0122 783 Pfam Aminotransferase class-V 199 445 IPR000192 -
Cmetu11g0122 783 Pfam Aminotransferase class-V 29 117 IPR000192 -
Cmetu11g0122 783 Gene3D Aspartate Aminotransferase, domain 1 299 451 IPR015422 GO:0003824
Cmetu11g0122 783 SUPERFAMILY PLP-dependent transferases 29 450 IPR015424 -
Cmetu11g0122 783 Gene3D - 23 298 IPR015421 GO:0003824
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmetu11g0122 K15631 - - csv:101220625 1442.17
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g1040 . . . . . . . . . . . . . . . . . . . . . . . . Cla02g01813 Cam02g1918 Cec02g1939 Cco02g1983 Clacu02g1900 Cmu02g1847 Cre02g2162 . . . . . . . . Blo15g00605 . . . . . . Bma12g00598 Sed14g1679 . . . . . . . . Bhi10g00965 Tan05g0609 Cmetu11g0122 . . . . . . . . . . . . Csa06g01170 Chy11g01023 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005491 1 7 1 1 1 1 1 1 1 2 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 4 1 1 39