Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmetu11g1661 ATGGCTTCTTTAACAAACAAAAACAACGATGTAGCCTACGATTTCTTTCCCTTCTTAAGAGTCTACAACGACGGTCGCGTCCAACGACTCATGATCACCTCCGACATCGTTCCTGCCAACGCCGACAACCACAAATCCCCTTTCCGATTCAAAGACGTCACCATCTCGGCAGATCCTGCTGTGTCGGCTCGTGTTTTCATCCCCTCCTCGGCTGATCCAAATCAAAAGCTGCCCCTCCTCTTTTACGTCCATGGCGGTGCCTTCTGCATCGAATCGGCTTTCAATTTGCAGTACCACAACCACGTGGGCTCTCTTGCTGCCAAGGCCAACGCCGTTGCAGTCTCCGTCGAGTACCGCCTTGCGCCGGAGCATCCCATCCCCGCCTGCTACGACGACTGTTGGGATGCTTTACGGTGGGTTGCGGCACATGTGAACAGAGATGGTCCAGAGCCATGGCTAAACACATACGGGGATTTCAATCGTATCTGTTTAGCTGGCGACAGTGCGGGTGCAAACATCTGCCATTACTTGGCTGCTCGAGCAAGTTTGTCGGCAGAGCAACTGGCTGGAGCAAAGGTGGTGGCAATGGCTTTGATTCACCCATTTTTCGGTGACGGGGGAGAGGATAGACTATGGAAGTATCTTTGTTCGGAGACAAGGTTAGTGAAACCAAGCATAGAGGATCTGGCAAAGTTGGGTTGTAAGAAAGTGAAGATTTTTTTGGCGGAAAAAGATGTTTTGAAGTTTGGTGGGATGAATTACGATGAGGATTTGAAGAGGAGCGGGTGGAATGGGGCGGTGGAGACGGTGGAGCACGACGGAGAAAATCATGTGTTTCATTTAAGGAAGCCAGAGTGTGAAAAGGCTGCTGATTTGTTGGAAAAATTAGCCTCTTTCATTAACTTCTGTTAG 912 50.0 MASLTNKNNDVAYDFFPFLRVYNDGRVQRLMITSDIVPANADNHKSPFRFKDVTISADPAVSARVFIPSSADPNQKLPLLFYVHGGAFCIESAFNLQYHNHVGSLAAKANAVAVSVEYRLAPEHPIPACYDDCWDALRWVAAHVNRDGPEPWLNTYGDFNRICLAGDSAGANICHYLAARASLSAEQLAGAKVVAMALIHPFFGDGGEDRLWKYLCSETRLVKPSIEDLAKLGCKKVKIFLAEKDVLKFGGMNYDEDLKRSGWNGAVETVEHDGENHVFHLRKPECEKAADLLEKLASFINFC 303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 26655470 26659187 - PI0018553.1 Cmetu11g1661 370393

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmetu11g1661 303 PANTHER ARYLACETAMIDE DEACETYLASE 15 286 - -
Cmetu11g1661 303 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 162 174 IPR033140 -
Cmetu11g1661 303 Gene3D alpha/beta hydrolase 17 302 IPR029058 -
Cmetu11g1661 303 Pfam alpha/beta hydrolase fold 80 280 IPR013094 GO:0016787
Cmetu11g1661 303 SUPERFAMILY alpha/beta-Hydrolases 19 301 IPR029058 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmetu11g1661 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmetu11g1661 Cmetu-Chr11:26655470 Cmetu12g1256 Cmetu-Chr12:5935373 6.40E-21 dispersed
Cmetu11g1661 Cmetu-Chr11:26655470 Cmetu11g1079 Cmetu-Chr11:26696908 4.30E-49 proximal
Cmetu11g1029 Cmetu-Chr11:26640431 Cmetu11g1661 Cmetu-Chr11:26655470 6.00E-70 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g441 Blo02g00823 . . . . . . . . . . Cma20g00894 . . . . . . . . . . . . . . . . . . . . . . . Lsi10g00298 . . . . . . . . . . . Sed01g0344 . . . . . . . . Bhi10g02088 Tan05g1409 Cmetu11g1661 . Hepe08g1072 . . Cla09g01701 Cam09g1797 Cec09g1860 Cco09g1950 . . Cre01g0710 . Csa02g01191 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001193 1 6 2 2 1 3 2 3 3 1 2 3 2 1 2 2 3 5 2 3 1 4 5 2 3 7 2 2 2 1 78