Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmetu11g2291 | ATGAGCGGCGAAAGCCGACGGCGAGGCCGTGGGGAAAAGAGTAGTAGGTCGAAGAAGCAGAGGGTAATTCGGTCAGCTGAGGAGGAGATCGAATCAAAGCTTGGATTTGATATCTTCTCTGAAGGCGATAAAAGGCTTGGATGGTTGCTCACTTTCGCTCCTTCATCTTTGGAGGATCAGGATACTGGAAAGGTCTATAGTTGTATTGATCTTTATTTTGTGACACAGGATGGGAGCAGTTTCAAGTCCAAATGTAAATTTCGTCCTTATTTCTATGCAGCCACAAAGGATAAAATGGAAACTGATGTGGAGGCATATTTGAGACGCCGTTATGAAGGACGAATAGCTGATATTGAGATTTTAGAAAAGGAAGACCTTGATCTTAAGAATCATCTGTCAGGATTGCGCAAGGCATATTTGAAACTATCATTTGACACTGTTCAAGAATTGATGAACGTGAAGAGTGAACTATTGCATGTTGTTGAAAACAACTGGGCAAAGTCTGAGGCTGCAGAAGCATATGATTCTATTTTATTTGGTAAAAGGGAACAAAAGCCTCAAGATTTTCTAGAATGCATTATTGATCTTCGAGAGTTTGACGTTCCATACCATGTCCGCTTTGCTATTGATCATGATTTACGCTGTGGACAATGGTACGATGTTACTGTTTCAAGTACTGGTGTTACACTTGAGAAGAGAAAAGATCTTCTGCAACGTGCTGAAGTTCACATATGTGCATTTGATATTGAAACCACAAAGCTACCATTGAAATTCCCAGATGCTGAATATGATATGATAATGATGATTTCCTATATGGTTGATGGAAATGGGTACTTGATTATCAATAGAGAGTGTGTTGGAGAAGATATTGAGAATTTGGAGTACACTCCAAAACCGGAATATGAAGGGTTCTTTAAAGTCACCAATGTGAAAAATGAGTTAGAGCTTCTCAAACTGTGGTTTTCCCATATGCGAGAGGTGAAACCTGGAATCTATGTCACCTATAATGGTGATTTTTTTGACTGGCCATTCATTGAAAGCAGAGCAGCTTATCATGGCTTTAAGATGAGTGATGAAGTAGGATTTCAATGTGACAAGAATCAGGGGGAATGCCGTTCAAAATTTGCTTGTCATTTGGATTGCTTTGCATGGGTAAAGCGTGATAGTTATCTACCTCAGGGTAGCCATGGTTTGAAGGCTGTCACAAAAGCTAAATTGGGTTATGATCCTCTTGAAGTGAATCCCGAGGATATGGTGCTGTTTGCAAAGGAAAAGCCTCAGATGATGGCTTCCTATTCTGTTTCAGATGCTGTTGCTACATACTACTTGTACATGACCTACGTTCATCCATTCATATTTTCTTTAGCAACTATTATTCCTATGTCACCAGATGAGGTGTTGCGCAAGGGAAGTGGGACACTTTGTGAAATGCTTCTAATGGTTCAGGCTTACAAGGCTAATGTCGTGTGTCCTAACAAACATCAATCAGATCCAGAGAAGTTCTACAGCAACCGGCTTCTTGAAAGTGAGACATACATTGGTGGTCACGTAGAATGCCTCGAGAGTGGTGTATTTAGATCTGATCTTCCTACCAGTTTTAGGCTTGATCCATCTGCTTATGATCAATTGATATACAATTTGGATAGAGATCTGCAATATGCCATACAAGTAGAAGGAAAGATGGCCTTGGAGTTGGTGTCAAATTATAGCGATGTGAAGAATGCTATCATGGAAAAGCTCATTAAATTGCGGGATGAGCCTGTACGTGAAGAGGGCCCTCTGATATATCACCTTGATGTAGCGGCGATGTATCCTAATATTATTTTAACAAATAGACTTCAGCCATCTTCAATAGTCACAGATGAGGTTTGTACTGCTTGTGATTTCAATCGTCCTGGAAAAACTTGCCTACGAAAACTCGAATGGGTTTGGCGTGGAGAGGTATTCATGGCTAAAAAAGGTAATCCCTCTCTCCACTCAGGCCGTTTACATTTTAAGCAAATTGAGTCTGAGTTTGTTGATAGTGGTAATCTTCGGTCGTCAAAATCATTTCTTGAACTTCCAAAGTTGGAGCAGCAAGCCAAGCTCAAAGATCGTTTAAAGAAATACTGTCAGAAGGCTTATAAACGAGTACTTGATAAGCCAGTCACTGAAGTTCGAGAAGCAGGGATTTGCATGAGAGAAAACTCTTTCTATATCGACACTGTTCGTAGTTTTCGAGATAGAAGGTACGAATACAAAGGGCTAAATAAAGTATGGAAGGGAAAATTATCCGAAGCTAAAGCAAGCGGAAATTCAATCAAGATCCAGGAAGCCCAGGACATGGTAGTTCTTTATGATTCTCTACAACTCGCTCATAAATGTATCCTCAACTCCTTTTATGGATATGTGATGCGAAAGGGCGCTCGATGGTATTCGATGGAAATGGCTGGGGTAGTTACATATACAGGAGCAAAAATCATTCAGAATGCTCGTCTGTTAATTGAGAAAATTGGAAAACCACTGGAGTTGGACACTGATGGTATCTGGTGTGCTCTACCTGGATCGTTCCCAGAGAACTTTACCTTCAAAACAAGAGAATCAAAGAAGTTGACAATTTCATATCCATGTGTTATGCTTAATGTTGATGTGGCAAGGAACAACACGAATGATCAATACCAGACGCTTATAGATCCTGTGAAGAAAACATATGAAACACACAGTGAATGCTCAATTGAATTTGAAGTAGATGGACCATATAAGGCAATGATCCTTCCTGCTTCCAAGGAAGAAGGCATTTTGATCAAGAAGAGATATGCCGTCTTCAATGATGATGGAACACTTGCGGAGCTAAAAGGCTTTGAGATCAAGCGTAGGGGGGAGTTAAAGCTCATCAAAGTTTTCCAGGCAGAACTTTTTGACAAGTTTCTCCATGGTTCCACATTAGAGGAATGCTACTCAGTTGTTGCATCTGTTGCAAATCGATGGCTTGATCTTCTAGATAATCAAGGAAAAGATATTGCAGATAGCGAGTTGCTGGATTATATATCTGAATCAAGTACCATGAGCAAGTCTTTGGTAGACTACGGGGAACAAAAGTCTTGTGCTGTTACCACTGCCAGACGTCTTGCAGATTTTCTTGGTGATACAATGGTCAGGGATAAAGGCCTACGTTGTCAATACATAGTTGCGTGTGAACCTAAGGGTACTCCTGTAAGTGAGCGTGCTGTTCCAGTTGCAATCTTTGAGACTGATGCAGAGATAATGAAATTTTATGTACGTAAATGGTGCAAGATTTCATCTGAAGTCGGGATCCGATCTATCATTGACTGGTCCTACTACAAGCAACGCTTAAGCTCAGCCATTCAAAAGATTATAACAATTCCAGCAGCCATGCAAAAGGTTGCAAATCCTGTTCCTAGGGTGGTCCATCCTGATTGGTTACATAAGAAAGTTCGAGAGAAGGATGATAAATTTCGCCAGCAGAAACTAGCTGATATGTTTGCATCCTCGAGCAGAGTTAAATATTCAAAGAAGAATAGTGATGTTAGCTGCAGCAAACATGCTATGGATGAAGATAAATCTGAAGATTTAGAAGATTTTCAAAAGAAAACAAGTTCTACAAATGGCCCCAAACCAGTTGTTCGATGTTATGATGTCAGAGGCAAGAAACATACACTTACAAGCGATATTGAAATAAACTCCGAGATGCAGGAGAATATTAATGATGGAGGATTTGAGCCTTCTTCACCCTTGCATGTTGAAAACATAGACAAAAATGTAGATTACAGTGGATGGCTTGAAATGAAGAAGCGAAAATGGAAGGATACTTTAGACAGGAGGAAGAAGCAAAGGTTAGTAAGTTCAAGGACTCCACTCGCTGCTAATAATGTTACAAGGGAGTTAAATGGTGCTACGAACAATGAAGATGCTTCTAGAATAGGTGTTGGTTCATATTTTAAGAGGCATGAAGGATCTGTAACTCGCTGCCATTGGCAGATTTTACAGCTTGTTCATAGTTCACAGAGTGGCCAATATTTTGCTTGGGCTGTCGTGGAAGGAGTTATGCTAAAGATCCCTATTAATGTTCCTAGAATTTTTTACCTTAATTCTAAAGCACCTATTACAGATGAATTTGTGGGCAGGCGTGTTAATAAAACTCTTCCCCATGGAAGGCATAGTTATAACCTGTATGAGGTTGTGACTGATGAGGGTCAATTTAGGACACAGAGGAATAAACTTGCAGCCCTACTTGCAGATCCAGAAGTAGAGGGAATCTATGAAAGCAAGGTACCATTAGAGTTTAAGTCCATCTTTCAGATTGGCTGTGTCTGTAAAGTTGATAAAACTGCTAAAAAACGAAACATTAAAGACGGATGGAATCTGGATGAACTGCAAATGAAGACTACAACAGAATGCAGTTATCTGGAAAAGTCAATCTCTTTCTTCTATGTGTATCATAGCATTTCTGAAGGAAGAGCTATCTACATTACCTTTTTTCCCTCCACAAGATCAATATTTGTGGTGGTGGTTAATCCTTACCAGAACAAAGACTTGTCATCAACTTTTCTTGAAAAGCAATTTCGTGAAGCTGGTCAAATGCTGTCTGGTGAATCACAACCTCCTAAGAGTGGTATAACTTACAAGGTAGACTATGTTGTTAACATCAAAGAAGCTGAAGTGATTTTGCAAAGATCGATAACAGAACACAGGAGCTTAAACCATGGACCTACTCTAGCTGTAATTCAATGCCCAAGTGTACAAAGGCTGAAGTCAGGTGTGAGAGTATTAGATGATTTTCCATGTGTGACCATCCCTTCTAATGCTCGTGATAACCAATATCAGGTTCTTGGTTGGCAACAAACAGCTGCAAAGATTGGAATGCAACGCTGTGCTGCATCATCCCAATGGTTGAATGAGAGAATCTCTCTTGCAAGATATGCCCATGTACCATTAGGAAATTTTGAACTTGATTGGTTAATTTTTACAGCAGATATATTTTTTTCAAGAGCATTACATGATCAACAACAGGTACTTTGGATATCAGATGATGGTGTTCCAGACATAGGAGGCATTAACATAGAAGATGTGTGTTTTGCTGATGAGGTCCAACAACCTATTCTGACGTACCCTGGAGCATATAGAAAAGTTTCTGTGGAATTTAAGATCCATCATTTGGCTGTCAATGCTCTGCTGAAGAGCAACCAAGTGAATGAAATGGAAGGAGGTAGTTTGTTTGGCTTTGAACGTGATATGCAATGTGGTGCACAATTTTCTAATGAAGAAGGTGGCTTTGATGAGGCTGCTTCATGCGCTCCGGCATTTCGTGTCCTGAAACAATTGATACAAAGGTGTCTTACAGATGCAGTTACGTCTGGAAATGTATATGCTGATGCAATTTTGCGGCATCTGTACAGATGGATTTGCAGCCCCCAATCAAAACTTCACGACCCAGCTCTTCATCGTTTGCTCCACAAGGTCATGCAAAAGGTGTTTGCTCTTTTGTTGGCTGAGCTACGCAAATTAGGTGCCACCATTATATTTGCAAACTTCTCAAGAATTATTATAGACACGGGAAGGTTTGATCTCTCTTCTGCCAAAGCATACTGTGATAGCTTGTTGAAAACAGTGCAAACAAGGGATCTGTTCGAGTGGATTGAGCTGGAACCATTACAGTTCTGGCACTCCCTGTTGTTTATGGATCAGTATAACTATGGTGGAATCCCGGCAAAAGATGATGAAAGCACAGATATTGAATCTCAAGTTGATATAGTGGCCAACTGGAACATTGCCGAGAATCTACCCAAGAAGATTCAGGATCACTTTGTTTTTATCATCTCCCAGTTTTTGTATATTCCATGGAATTATGCAACCAAGCAAGCTGCAGCAAGATCATCATTGCAGCGCGATGACACATGTACCCCATCCATTACTGTTTTAGCTGCTGAATCGTTTGAATCACACGTGACAGAAAATCTGAAAGAACAGCTAAGCTCTTACTTCAGTGACAAAATGTTGGGAATTGTTCGGGACATTGTTCTTCATATGAAAGGGAAGGAGAAGAACATCCAGGATGTTTTGCCAGAACAACCTTCTGGTAATATCCACAAAGGAGATGCTGCTTTGGAATTCATTAAGCTCGTCTGCTCTGTTTTGGCTATTGATCAAAATGTCCAGCATGATGTTCTGGTAATGAGGAAAAATTTACTGAAGTTTGTGCGTGTAAGAGAGTTTGCACCCGAAGCTGAGTTTTCTAATTCCAGCCCGTCCATAATCTTGCCCAACGTTATTTGCAGCTATTGCGACGATTGTCGAGATTTGGACTTGTGCCGCGACTCAGCTTTACTAGCACAGGAATGGCACTGTGCTGTGCCACAATGTGGACAACCATACGACCAAGAAGAGATGGAGAATGCGCTGCTTCAAATCGTGCGACAGAGGGAGCGTCTCTATCATGTGCAGGATCTGGTATGCGTTCGTTGCAACCAAGTGAAAGCAGCTCATTTATCGGAACAATGTGGTTGTGCCGGTTCATTTAAATGCAAAGAAGATGCGCCAGAATTTTTCAGCAAGATGCTGATTCTTCTTAATGTAGCCACTCGTCAAAAGTTTCAACTACTGCAAGAGTTCACCTCGTGGATCTTAGAAAACTCATGA | 6636 | 40.6 | MSGESRRRGRGEKSSRSKKQRVIRSAEEEIESKLGFDIFSEGDKRLGWLLTFAPSSLEDQDTGKVYSCIDLYFVTQDGSSFKSKCKFRPYFYAATKDKMETDVEAYLRRRYEGRIADIEILEKEDLDLKNHLSGLRKAYLKLSFDTVQELMNVKSELLHVVENNWAKSEAAEAYDSILFGKREQKPQDFLECIIDLREFDVPYHVRFAIDHDLRCGQWYDVTVSSTGVTLEKRKDLLQRAEVHICAFDIETTKLPLKFPDAEYDMIMMISYMVDGNGYLIINRECVGEDIENLEYTPKPEYEGFFKVTNVKNELELLKLWFSHMREVKPGIYVTYNGDFFDWPFIESRAAYHGFKMSDEVGFQCDKNQGECRSKFACHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVLFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVVCPNKHQSDPEKFYSNRLLESETYIGGHVECLESGVFRSDLPTSFRLDPSAYDQLIYNLDRDLQYAIQVEGKMALELVSNYSDVKNAIMEKLIKLRDEPVREEGPLIYHLDVAAMYPNIILTNRLQPSSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEVFMAKKGNPSLHSGRLHFKQIESEFVDSGNLRSSKSFLELPKLEQQAKLKDRLKKYCQKAYKRVLDKPVTEVREAGICMRENSFYIDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCALPGSFPENFTFKTRESKKLTISYPCVMLNVDVARNNTNDQYQTLIDPVKKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYSVVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLVDYGEQKSCAVTTARRLADFLGDTMVRDKGLRCQYIVACEPKGTPVSERAVPVAIFETDAEIMKFYVRKWCKISSEVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKDDKFRQQKLADMFASSSRVKYSKKNSDVSCSKHAMDEDKSEDLEDFQKKTSSTNGPKPVVRCYDVRGKKHTLTSDIEINSEMQENINDGGFEPSSPLHVENIDKNVDYSGWLEMKKRKWKDTLDRRKKQRLVSSRTPLAANNVTRELNGATNNEDASRIGVGSYFKRHEGSVTRCHWQILQLVHSSQSGQYFAWAVVEGVMLKIPINVPRIFYLNSKAPITDEFVGRRVNKTLPHGRHSYNLYEVVTDEGQFRTQRNKLAALLADPEVEGIYESKVPLEFKSIFQIGCVCKVDKTAKKRNIKDGWNLDELQMKTTTECSYLEKSISFFYVYHSISEGRAIYITFFPSTRSIFVVVVNPYQNKDLSSTFLEKQFREAGQMLSGESQPPKSGITYKVDYVVNIKEAEVILQRSITEHRSLNHGPTLAVIQCPSVQRLKSGVRVLDDFPCVTIPSNARDNQYQVLGWQQTAAKIGMQRCAASSQWLNERISLARYAHVPLGNFELDWLIFTADIFFSRALHDQQQVLWISDDGVPDIGGINIEDVCFADEVQQPILTYPGAYRKVSVEFKIHHLAVNALLKSNQVNEMEGGSLFGFERDMQCGAQFSNEEGGFDEAASCAPAFRVLKQLIQRCLTDAVTSGNVYADAILRHLYRWICSPQSKLHDPALHRLLHKVMQKVFALLLAELRKLGATIIFANFSRIIIDTGRFDLSSAKAYCDSLLKTVQTRDLFEWIELEPLQFWHSLLFMDQYNYGGIPAKDDESTDIESQVDIVANWNIAENLPKKIQDHFVFIISQFLYIPWNYATKQAAARSSLQRDDTCTPSITVLAAESFESHVTENLKEQLSSYFSDKMLGIVRDIVLHMKGKEKNIQDVLPEQPSGNIHKGDAALEFIKLVCSVLAIDQNVQHDVLVMRKNLLKFVRVREFAPEAEFSNSSPSIILPNVICSYCDDCRDLDLCRDSALLAQEWHCAVPQCGQPYDQEEMENALLQIVRQRERLYHVQDLVCVRCNQVKAAHLSEQCGCAGSFKCKEDAPEFFSKMLILLNVATRQKFQLLQEFTSWILENS | 2211 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 5028082 | 5056522 | - | PI0012869.1 | Cmetu11g2291 | 371023 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmetu11g2291 | 2211 | PANTHER | DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A | 17 | 2209 | IPR029703 | GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622 | |
| Cmetu11g2291 | 2211 | Gene3D | - | 243 | 443 | IPR036397 | GO:0003676 | |
| Cmetu11g2291 | 2211 | Gene3D | Palm domain of DNA polymerase | 754 | 942 | IPR023211 | - | |
| Cmetu11g2291 | 2211 | Pfam | Domain of unknown function (DUF1744) | 1527 | 1901 | IPR013697 | GO:0003887|GO:0005634|GO:0006260|GO:0008270 | |
| Cmetu11g2291 | 2211 | CDD | POLBc_epsilon | 504 | 1127 | - | - | |
| Cmetu11g2291 | 2211 | MobiDBLite | consensus disorder prediction | 1178 | 1196 | - | - | |
| Cmetu11g2291 | 2211 | SUPERFAMILY | DNA/RNA polymerases | 487 | 1120 | IPR043502 | - | |
| Cmetu11g2291 | 2211 | FunFam | DNA polymerase epsilon catalytic subunit | 762 | 942 | - | - | |
| Cmetu11g2291 | 2211 | FunFam | DNA polymerase epsilon catalytic subunit | 946 | 1130 | - | - | |
| Cmetu11g2291 | 2211 | MobiDBLite | consensus disorder prediction | 1178 | 1208 | - | - | |
| Cmetu11g2291 | 2211 | Pfam | DNA polymerase family B, exonuclease domain | 75 | 401 | IPR006133 | - | |
| Cmetu11g2291 | 2211 | SUPERFAMILY | Ribonuclease H-like | 63 | 491 | IPR012337 | - | |
| Cmetu11g2291 | 2211 | SMART | DUF1744_2 | 1516 | 1901 | IPR013697 | GO:0003887|GO:0005634|GO:0006260|GO:0008270 | |
| Cmetu11g2291 | 2211 | FunFam | DNA polymerase epsilon catalytic subunit | 57 | 228 | - | - | |
| Cmetu11g2291 | 2211 | FunFam | DNA polymerase epsilon catalytic subunit | 241 | 469 | - | - | |
| Cmetu11g2291 | 2211 | Gene3D | DNA Polymerase, chain B, domain 1 | 57 | 234 | - | - | |
| Cmetu11g2291 | 2211 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Cmetu11g2291 | 2211 | Gene3D | - | 946 | 1130 | IPR042087 | - | |
| Cmetu11g2291 | 2211 | SMART | polmehr3 | 240 | 848 | IPR006172 | GO:0000166|GO:0003676|GO:0003887 | |
| Cmetu11g2291 | 2211 | CDD | DNA_polB_epsilon_exo | 241 | 445 | - | - | |
| Cmetu11g2291 | 2211 | Pfam | DNA polymerase family B | 761 | 1075 | IPR006134 | GO:0000166|GO:0003677 |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmetu11g2291 | K02324 | - | - | csv:101208568 | 4262.99 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmetu09g1641 | Cmetu-Chr9:17260317 | Cmetu11g2291 | Cmetu-Chr11:5028082 | 0.00E+00 | dispersed |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi6g1182 | . | . | Bda02g00714 | . | Bpe01g00239 | . | . | . | . | . | . | . | . | . | . | Cpe05g00419 | . | . | . | . | . | . | . | . | Cla02g02143 | Cam02g2276 | Cec02g2314 | Cco02g2358 | Clacu02g2254 | Cmu02g2187 | Cre02g2512 | . | . | . | . | . | Csa06g01291 | Chy11g00894 | . | . | Blo14g00223 | . | . | . | . | . | Bma11g00219 | Sed05g1215 | Cmo02g01374 | . | Cma02g01335 | . | Car02g01122 | . | . | . | Bhi10g00063 | Tan05g0138 | Cmetu11g2291 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Syn-Families
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Cmetu09g1973 | . | 106 | 796 | Core DNA Replication Machinery Family | AT4G14700 | 66.8 | 7.2e-269 | 923.7 | |
| Cmetu09g1273 | . | 105 | 608 | Core DNA Replication Machinery Family | AT4G14700 | 59.5 | 4.8e-172 | 602.1 | |
| Cmetu02g0756 | . | 91 | 494 | Core DNA Replication Machinery Family | AT4G14700 | 68.4 | 4.1e-163 | 572.4 | |
| Cmetu09g1323 | . | 106 | 266 | Core DNA Replication Machinery Family | AT4G14700 | 65.9 | 2.1e-58 | 224.6 | |
| Cmetu09g0384 | . | 6 | 137 | Core DNA Replication Machinery Family | AT4G14700 | 73.7 | 1.9e-51 | 201.4 | |
| Cmetu09g1973 | . | 72 | 796 | Core DNA Replication Machinery Family | AT4G12620 | 67.1 | 1.0e-278 | 956.4 | |
| Cmetu09g1273 | . | 71 | 608 | Core DNA Replication Machinery Family | AT4G12620 | 60.0 | 4.8e-180 | 628.6 | |
| Cmetu02g0756 | . | 89 | 494 | Core DNA Replication Machinery Family | AT4G12620 | 68.7 | 1.1e-163 | 574.3 | |
| Cmetu09g1323 | . | 72 | 266 | Core DNA Replication Machinery Family | AT4G12620 | 61.8 | 1.5e-64 | 245.0 | |
| Cmetu09g0384 | . | 6 | 137 | Core DNA Replication Machinery Family | AT4G12620 | 73.7 | 7.2e-51 | 199.5 | |
| Cmetu03g0945 | . | 2 | 360 | Core DNA Replication Machinery Family | AT2G37560 | 65.5 | 2.7e-140 | 495.4 | |
| Cmetu10g0487 | . | 2 | 351 | Core DNA Replication Machinery Family | AT2G01120 | 65.0 | 1.6e-131 | 466.5 | |
| Cmetu11g0818 | . | 3 | 536 | Core DNA Replication Machinery Family | AT4G29910 | 59.7 | 4.8e-179 | 624.8 | |
| Cmetu05g1262 | . | 1 | 283 | Core DNA Replication Machinery Family | AT1G26840 | 64.0 | 3.8e-92 | 335.1 | |
| Cmetu01g1941 | . | 4 | 800 | Core DNA Replication Machinery Family | AT1G79150 | 59.6 | 1.1e-245 | 846.7 | |
| Cmetu04g0809 | . | 1 | 952 | Core DNA Replication Machinery Family | AT1G44900 | 72.9 | 0.0e+00 | 1307.4 | |
| Cmetu04g1329 | . | 1 | 554 | Core DNA Replication Machinery Family | AT5G46280 | 77.1 | 3.1e-250 | 861.3 | |
| Cmetu01g1320 | . | 1 | 844 | Core DNA Replication Machinery Family | AT2G16440 | 76.1 | 0.0e+00 | 1151.0 | |
| Cmetu05g1624 | . | 1 | 735 | Core DNA Replication Machinery Family | AT2G07690 | 78.4 | 0.0e+00 | 1113.6 | |
| Cmetu04g3110 | . | 68 | 896 | Core DNA Replication Machinery Family | AT5G44635 | 72.6 | 0.0e+00 | 1192.6 | |
| Cmetu01g2697 | . | 4 | 722 | Core DNA Replication Machinery Family | AT4G02060 | 85.0 | 0.0e+00 | 1217.6 | |
| Cmetu11g1143 | . | 12 | 504 | Core DNA Replication Machinery Family | AT2G29680 | 59.4 | 5.7e-163 | 571.2 | |
| Cmetu11g1143 | . | 22 | 465 | Core DNA Replication Machinery Family | AT1G07270 | 58.2 | 8.2e-140 | 494.2 | |
| Cmetu01g0268 | . | 1 | 592 | Core DNA Replication Machinery Family | AT3G25100 | 76.5 | 3.2e-258 | 887.9 | |
| Cmetu04g2866 | . | 12 | 770 | Core DNA Replication Machinery Family | AT3G09660 | 72.7 | 4.0e-314 | 1073.5 | |
| Cmetu01g0077 | . | 10 | 645 | Core DNA Replication Machinery Family | AT2G14050 | 77.7 | 6.5e-289 | 989.9 | |
| Cmetu11g2130 | . | 1 | 404 | Core DNA Replication Machinery Family | AT2G20980 | 56.3 | 2.5e-118 | 422.5 | |
| Cmetu01g2696 | . | 1 | 200 | Core DNA Replication Machinery Family | AT1G80190 | 67.8 | 7.9e-76 | 280.4 | |
| Cmetu07g0908 | . | 44 | 188 | Core DNA Replication Machinery Family | AT3G12530 | 72.4 | 1.6e-60 | 229.2 | |
| Cmetu03g0030 | . | 1 | 184 | Core DNA Replication Machinery Family | AT1G19080 | 67.4 | 3.9e-69 | 258.1 | |
| Cmetu03g0030 | . | 1 | 184 | Core DNA Replication Machinery Family | AT3G55490 | 67.4 | 3.9e-69 | 258.1 | |
| Cmetu06g0031 | . | 15 | 164 | Core DNA Replication Machinery Family | AT5G49010 | 66.0 | 2.4e-50 | 195.7 | |
| Cmetu11g1317 | . | 1 | 1546 | Core DNA Replication Machinery Family | AT5G67100 | 60.7 | 0.0e+00 | 1779.2 | |
| Cmetu12g1528 | . | 104 | 726 | Core DNA Replication Machinery Family | AT1G67630 | 61.8 | 1.7e-217 | 752.7 | |
| Cmetu11g0430 | . | 1 | 447 | Core DNA Replication Machinery Family | AT1G67320 | 65.1 | 5.1e-185 | 644.4 | |
| Cmetu09g0829 | . | 10 | 364 | Core DNA Replication Machinery Family | AT5G41880 | 63.3 | 8.9e-144 | 507.3 | |
| Cmetu08g0422 | . | 1 | 1048 | Core DNA Replication Machinery Family | AT5G63960 | 79.2 | 0.0e+00 | 1686.0 | |
| Cmetu04g0761 | . | 1 | 444 | Core DNA Replication Machinery Family | AT2G42120 | 75.0 | 4.9e-203 | 704.1 | |
| Cmetu11g0430 | . | 1 | 447 | Core DNA Replication Machinery Family | AT1G67320 | 65.1 | 5.1e-185 | 644.4 | |
| Cmetu09g1681 | . | 1 | 125 | Core DNA Replication Machinery Family | AT1G09815 | 60.8 | 2.6e-37 | 151.8 | |
| Cmetu11g2291 | . | 1 | 2101 | Core DNA Replication Machinery Family | AT1G08260 | 70.4 | 0.0e+00 | 2935.6 | |
| Cmetu09g1641 | . | 7 | 710 | Core DNA Replication Machinery Family | AT1G08260 | 76.1 | 0.0e+00 | 1131.7 | |
| Cmetu11g2291 | . | 25 | 2208 | Core DNA Replication Machinery Family | AT2G27120 | 67.1 | 0.0e+00 | 2906.3 | |
| Cmetu09g1641 | . | 29 | 710 | Core DNA Replication Machinery Family | AT2G27120 | 74.6 | 0.0e+00 | 1082.0 | |
| Cmetu09g1641 | . | 722 | 1215 | Core DNA Replication Machinery Family | AT2G27120 | 51.6 | 8.0e-134 | 476.5 | |
| Cmetu12g1449 | . | 1 | 258 | Core DNA Replication Machinery Family | AT5G22110 | 77.9 | 1.1e-121 | 434.1 | |
| Cmetu12g0662 | . | 7 | 218 | Core DNA Replication Machinery Family | AT5G22110 | 58.2 | 1.2e-56 | 218.0 | |
| Cmetu05g0121 | . | 1 | 927 | Core DNA Replication Machinery Family | AT5G22010 | 63.2 | 5.9e-304 | 1040.4 | |
| Cmetu06g1240 | . | 1 | 334 | Core DNA Replication Machinery Family | AT1G63160 | 91.0 | 6.1e-174 | 607.1 | |
| Cmetu08g0376 | . | 1 | 354 | Core DNA Replication Machinery Family | AT5G27740 | 85.3 | 3.0e-179 | 624.8 | |
| Cmetu07g2093 | . | 1 | 334 | Core DNA Replication Machinery Family | AT1G21690 | 81.8 | 2.7e-153 | 538.5 | |
| Cmetu03g1930 | . | 1 | 363 | Core DNA Replication Machinery Family | AT1G77470 | 75.8 | 1.6e-154 | 542.7 | |
| Cmetu05g1912 | . | 26 | 590 | Core DNA Replication Machinery Family | AT2G06510 | 66.3 | 3.4e-234 | 808.1 | |
| Cmetu06g1804 | . | 32 | 705 | Core DNA Replication Machinery Family | AT2G06510 | 50.7 | 1.3e-198 | 689.9 | |
| Cmetu02g1294 | . | 1 | 611 | Core DNA Replication Machinery Family | AT5G08020 | 66.7 | 7.1e-237 | 817.0 | |
| Cmetu06g1804 | . | 10 | 813 | Core DNA Replication Machinery Family | AT5G45400 | 52.2 | 1.0e-233 | 807.0 | |
| Cmetu02g1294 | . | 6 | 606 | Core DNA Replication Machinery Family | AT5G61000 | 65.3 | 7.1e-232 | 800.4 | |
| Cmetu06g1804 | . | 5 | 800 | Core DNA Replication Machinery Family | AT4G19130 | 53.8 | 6.4e-230 | 794.3 | |
| Cmetu02g0333 | . | 1 | 225 | Core DNA Replication Machinery Family | AT3G02920 | 50.2 | 1.4e-55 | 213.4 | |
| Cmetu02g1464 | . | 1 | 404 | Core DNA Replication Machinery Family | AT5G26680 | 82.5 | 1.4e-188 | 656.0 | |
| Cmetu06g2653 | . | 1 | 1103 | Core DNA Replication Machinery Family | AT1G08840 | 53.0 | 1.1e-301 | 1033.1 | |
| Cmetu07g2177 | . | 1 | 297 | Core DNA Replication Machinery Family | AT2G25100 | 67.0 | 4.1e-115 | 411.4 | |
| Cmetu11g1276 | . | 1 | 805 | Core DNA Replication Machinery Family | AT1G08130 | 65.6 | 9.7e-295 | 1009.6 | |
| Cmetu11g1276 | . | 205 | 805 | Core DNA Replication Machinery Family | AT1G49250 | 68.6 | 1.1e-240 | 829.7 |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0003287 | 1 | 3 | 1 | 1 | 1 | 2 | 1 | 2 | 2 | 1 | 2 | 2 | 1 | 2 | 1 | 1 | 3 | 1 | 1 | 2 | 1 | 1 | 2 | 2 | 2 | 2 | 2 | 4 | 2 | 1 | 50 |