Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmetu12g1308 ATGAAGATCTCCAATTCCATTCTTATTTTATTTTCACTCCTTTTGATAATATCACCTGCCATTGCTGCCAAAAAGTCTTATATTGTGTTATTGGGATCCCATTCACATGGACTAGAAGTTACAGATGAAAGTCTTGAAAGGGTGGTTGATTCCCATAAAAAATTGCTTGGATCCATCTTCCGAAGTGATGAGAAGGCAAGGGATGCTATATTTTACTCCTATAAGAAGAATATAAATGGTTTTGCTGCAATTATGGATGAGGAAGAGGCAACCCAGCTTGCAAAACACCCGGAAGTAGCAGCGGTATTGCCAAACAGAGCAAAACAATTACATACAACACATTCATGGGAGTTTATGCATTTGGAGAAGAATGGTGTAATTCCCCCTTCATCTGCTTGGCGTAGGGCTAAATCTGGAAAAGATGTCATTATAGCCAATCTTGACACTGGTGTATGGCCGGAGTCCAAGAGTTTTGGAGAACATGGGATAGTTGGACCTGTTCCATCAAAGTGGAAAGGAGGTTGCACTGATAAAACCCCTGATGGAGTGCCATGTAACAGGAAACTAATAGGAGCAAAGTACTTCAATAAGGGCTTTCTCGCATACTTGAAGTCTGAGAATTTGACAGCATCTGTGATTAACTCTACTCGCGACTACGACGGTCATGGTTCACACACCTTGTCCACGGCTGGGGGCAGCTATGTGTCCGGCGCCAATGTGTTCGGGTCAGGCGTTGGAACTGCCAAAGGGGGCTCTCCCAAGGCTCGTGTTGCCGCCTATAAGGTTTGCTGGCCACTTGAGGATGGAGGTTGTTTCGACGCCGACATTGCCGAGGCATTTGACCATGCCATTCACGACCGAGTTGATGTTCTTTCGCTCTCCCTAGGTGGCGAGCCAGCCGAATACTATGAGGATGGAATCGCCATTGCAGCCTTCCATGCAGTGAAGAAGGGAATCCCTGTGGTGTGCTCGGCTGGTAACTCTGGCCCTGGGGCTCAGACTGTTTCTAACACTGCACCTTGGATTTTGACTGTTGGTGCAAGTACTTTGGATCGTGAGTTTCAGGCACCTGTTGAACTCCAAAATGGCCATCGTTACATGGGTTCGAGCCTTTCAAAAGGATTAAAGGGAAGCAAGCTTTATCCATTGATAACTGGAGCTGAAGCGAAAGCGAAGAACGCCACCGCGGAGGTGGCCATGCTTTGCAAACCAAAAACATTGGATCATTCAAAAGTGAAAGGGAAGATATTGGTTTGCTTGAGAGGAGACACTGCAAGAGTAGACAAAGGAGAACAAGCGGCCCTTGCCGGTGCTGTCGGAATGATTCTATGCAATGATGAGCTAAGTGGGTTCGAAACCATCGCAGATCCCCATGTTCTTCCAGCTTCCCATATCAATTACAATGATGGCCAAGCTGTTTACTCATACATCAATTCCACCAAAAATCCGATGGGGTATTTAATCCCACCATCGGCTAAAGTTAACACCAAACCTGCTCCCACTATGGCAGCCTTTTCATCTCGAGGACCCAACCCTATTTCCCCTGAGATTATCAAGCCAGATGTGACTGCACCGGGTGCGAATATAATTGCAGCGTTCTCAGAGGCCGTAAGCCCAACAGGTGAACCATTTGACAATAGAACAGTTCCATTCATAACAATGTCAGGCACCTCCATGTCTTGCCCCCATGTCTCTGGCCTTGTCGGCCTTCTTAGAACTCTCCACCCCCAGTGGAGCCCCTCCGCTATCAAATCTGCCATCATGACCTCTGCTAGAATTCGTGACAACACAAACAAACCCATGCTCGATGGTGGCTCCCTTGAACTCGCCCCTGCCACCCCCTTTGCTTATGGCTCTGGCCACATTCGCCCTACTGGAGCCATTGACCCCGGCCTCGTCTATGATCTCTCCCCCAATGACTACTTGGAATTTCTCTGCGCCAGTGGCTACGACGAGAAGACCATTCAAGCATTCTCTGATGGCCATTTCAAATGCCCAGCTTCTGCTTCTATTTTAAACTTCAATTATCCTTCCATTGGGGTTCAGAATTTGAATGGCAGTGTCACCGTCACTAGGAAATTGAAGAACGTTAGCACTCCTGGGGTATACAAAGCCAGAATTAGGCACCCGAATGGAGTTAAGATTTTAGTGAAGCCCAAAGTTTTGAAGTTCGAGAGAGTTGGAGAGGAGAAAAGCTTTGAATTGACAATAACTGGAGATGTGCCAGAGAATCAGGTTGTTGACGGCGTGCTGATTTGGACTGATGGCAAGCACTTTGTTAGGAGTCCCATTGTCGTTTCCTCTAGCTTGTTTTGA 2316 47.06 MKISNSILILFSLLLIISPAIAAKKSYIVLLGSHSHGLEVTDESLERVVDSHKKLLGSIFRSDEKARDAIFYSYKKNINGFAAIMDEEEATQLAKHPEVAAVLPNRAKQLHTTHSWEFMHLEKNGVIPPSSAWRRAKSGKDVIIANLDTGVWPESKSFGEHGIVGPVPSKWKGGCTDKTPDGVPCNRKLIGAKYFNKGFLAYLKSENLTASVINSTRDYDGHGSHTLSTAGGSYVSGANVFGSGVGTAKGGSPKARVAAYKVCWPLEDGGCFDADIAEAFDHAIHDRVDVLSLSLGGEPAEYYEDGIAIAAFHAVKKGIPVVCSAGNSGPGAQTVSNTAPWILTVGASTLDREFQAPVELQNGHRYMGSSLSKGLKGSKLYPLITGAEAKAKNATAEVAMLCKPKTLDHSKVKGKILVCLRGDTARVDKGEQAALAGAVGMILCNDELSGFETIADPHVLPASHINYNDGQAVYSYINSTKNPMGYLIPPSAKVNTKPAPTMAAFSSRGPNPISPEIIKPDVTAPGANIIAAFSEAVSPTGEPFDNRTVPFITMSGTSMSCPHVSGLVGLLRTLHPQWSPSAIKSAIMTSARIRDNTNKPMLDGGSLELAPATPFAYGSGHIRPTGAIDPGLVYDLSPNDYLEFLCASGYDEKTIQAFSDGHFKCPASASILNFNYPSIGVQNLNGSVTVTRKLKNVSTPGVYKARIRHPNGVKILVKPKVLKFERVGEEKSFELTITGDVPENQVVDGVLIWTDGKHFVRSPIVVSSSLF 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 16091480 16095870 + PI0025840.1 Cmetu12g1308 372644

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmetu12g1308 771 Gene3D - 645 769 - -
Cmetu12g1308 771 Gene3D Peptidase S8/S53 domain 141 641 IPR036852 GO:0004252|GO:0006508
Cmetu12g1308 771 FunFam Subtilisin-like protease SBT1.5 141 363 - -
Cmetu12g1308 771 SUPERFAMILY Protease propeptides/inhibitors 25 106 - -
Cmetu12g1308 771 Pfam PA domain 398 472 IPR003137 -
Cmetu12g1308 771 CDD PA_subtilisin_like 358 487 - -
Cmetu12g1308 771 Pfam Fibronectin type-III domain 673 766 IPR041469 -
Cmetu12g1308 771 ProSiteProfiles Serine proteases, subtilase domain profile. 115 628 - -
Cmetu12g1308 771 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 111 IPR037045 -
Cmetu12g1308 771 SUPERFAMILY PA domain 409 480 IPR046450 -
Cmetu12g1308 771 FunFam Subtilisin-like protease SBT5.3 16 111 - -
Cmetu12g1308 771 Pfam Subtilase family 139 597 IPR000209 GO:0006508|GO:0008236
Cmetu12g1308 771 ProSitePatterns Serine proteases, subtilase family, serine active site. 556 566 IPR023828 -
Cmetu12g1308 771 Pfam Peptidase inhibitor I9 26 110 IPR010259 -
Cmetu12g1308 771 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 64 766 IPR045051 -
Cmetu12g1308 771 PRINTS Subtilisin serine protease family (S8) signature 555 571 IPR015500 -
Cmetu12g1308 771 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Cmetu12g1308 771 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Cmetu12g1308 771 FunFam Subtilisin-like protease SBT1.5 645 769 - -
Cmetu12g1308 771 SUPERFAMILY Subtilisin-like 110 632 IPR036852 GO:0004252|GO:0006508
Cmetu12g1308 771 FunFam subtilisin-like protease SBT1.5 351 494 - -
Cmetu12g1308 771 CDD Peptidases_S8_3 108 591 IPR034197 -
Cmetu12g1308 771 Gene3D - 351 495 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmetu12g1308 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmetu06g2527 Cmetu-Chr6:27363918 Cmetu12g1308 Cmetu-Chr12:16091480 4.40E-212 dispersed
Cmetu06g2569 Cmetu-Chr6:27354380 Cmetu12g1308 Cmetu-Chr12:16091480 7.10E-226 dispersed
Cmetu07g0008 Cmetu-Chr7:4748981 Cmetu12g1308 Cmetu-Chr12:16091480 1.60E-129 dispersed
Cmetu10g1732 Cmetu-Chr10:15412719 Cmetu12g1308 Cmetu-Chr12:16091480 6.50E-125 dispersed
Cmetu11g2491 Cmetu-Chr11:28522781 Cmetu12g1308 Cmetu-Chr12:16091480 5.80E-151 dispersed
Cmetu12g1308 Cmetu-Chr12:16091480 Cmetu12g1485 Cmetu-Chr12:18518205 1.90E-117 dispersed
Cmetu12g1308 Cmetu-Chr12:16091480 Cmetu12g0778 Cmetu-Chr12:16102915 0.00E+00 tandem
Cmetu01g2108 Cmetu-Chr1:4186650 Cmetu12g1308 Cmetu-Chr12:16091480 4.90E-246 transposed
Cmetu04g2446 Cmetu-Chr4:1444343 Cmetu12g1308 Cmetu-Chr12:16091480 8.80E-158 transposed
Cmetu12g1308 Cmetu-Chr12:16091480 Cmetu05g1568 Cmetu-Chr5:8166603 1.50E-37 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cmetu10g0667 . 23 764 Subtilisin-like Serine Gene Family AT1G01900 57.0 2.2e-230 795.8
Cmetu10g1284 . 18 768 Subtilisin-like Serine Gene Family AT1G01900 54.6 3.7e-230 795.0
Cmetu04g1645 . 12 767 Subtilisin-like Serine Gene Family AT1G04110 67.3 8.0e-310 1059.7
Cmetu04g0725 . 30 767 Subtilisin-like Serine Gene Family AT1G20150 53.7 4.7e-225 778.1
Cmetu04g0725 . 6 511 Subtilisin-like Serine Gene Family AT1G20160 61.1 5.8e-169 591.3
Cmetu03g0595 . 38 489 Subtilisin-like Serine Gene Family AT1G20160 51.9 9.0e-122 434.5
Cmetu04g2572 . 31 835 Subtilisin-like Serine Gene Family AT1G30600 66.1 6.3e-313 1070.1
Cmetu07g0008 . 58 760 Subtilisin-like Serine Gene Family AT1G32940 51.0 1.9e-196 682.9
Cmetu07g0008 . 58 760 Subtilisin-like Serine Gene Family AT1G32950 50.8 1.5e-196 683.3
Cmetu07g0008 . 29 760 Subtilisin-like Serine Gene Family AT1G32960 50.7 4.1e-205 711.8
Cmetu12g0763 . 21 794 Subtilisin-like Serine Gene Family AT1G62340 55.0 4.8e-244 841.3
Cmetu01g2108 . 1 787 Subtilisin-like Serine Gene Family AT2G04160 61.7 1.5e-276 949.1
Cmetu06g1522 . 742 1484 Subtilisin-like Serine Gene Family AT2G04160 59.5 8.7e-256 880.2
Cmetu06g2527 . 4 752 Subtilisin-like Serine Gene Family AT2G04160 55.1 1.1e-239 826.6
Cmetu06g0629 . 14 753 Subtilisin-like Serine Gene Family AT2G04160 55.0 7.4e-239 823.9
Cmetu06g2569 . 30 763 Subtilisin-like Serine Gene Family AT2G04160 53.7 6.9e-237 817.4
Cmetu12g1308 . 1 766 Subtilisin-like Serine Gene Family AT2G04160 53.2 1.0e-232 803.5
Cmetu12g0778 . 11 769 Subtilisin-like Serine Gene Family AT2G04160 52.8 9.4e-226 780.4
Cmetu06g2346 . 44 739 Subtilisin-like Serine Gene Family AT2G04160 55.1 3.9e-224 775.0
Cmetu06g2390 . 29 654 Subtilisin-like Serine Gene Family AT2G04160 56.0 3.0e-208 722.2
Cmetu02g0782 . 25 764 Subtilisin-like Serine Gene Family AT2G05920 72.6 0.0e+00 1089.7
Cmetu08g0313 . 24 761 Subtilisin-like Serine Gene Family AT2G05920 55.7 2.5e-231 798.9
Cmetu03g0720 . 34 769 Subtilisin-like Serine Gene Family AT2G05920 55.7 8.0e-222 767.3
Cmetu06g2577 . 27 772 Subtilisin-like Serine Gene Family AT2G05920 51.9 2.9e-216 748.8
Cmetu01g0950 . 30 761 Subtilisin-like Serine Gene Family AT2G05920 53.6 8.6e-216 747.3
Cmetu11g2491 . 35 768 Subtilisin-like Serine Gene Family AT2G05920 50.4 6.8e-205 711.1
Cmetu01g2680 . 30 772 Subtilisin-like Serine Gene Family AT2G05920 51.6 2.2e-203 706.1
Cmetu05g0002 . 1 726 Subtilisin-like Serine Gene Family AT2G19170 81.5 0.0e+00 1229.5
Cmetu05g1568 . 1 287 Subtilisin-like Serine Gene Family AT2G19170 79.5 1.3e-132 471.1
Cmetu01g0950 . 1 769 Subtilisin-like Serine Gene Family AT3G14067 63.8 4.0e-285 977.6
Cmetu08g0313 . 9 761 Subtilisin-like Serine Gene Family AT3G14067 53.9 1.2e-223 773.5
Cmetu02g0782 . 10 762 Subtilisin-like Serine Gene Family AT3G14067 52.6 2.1e-217 752.7
Cmetu03g0720 . 20 769 Subtilisin-like Serine Gene Family AT3G14067 50.3 3.4e-207 718.8
Cmetu01g2680 . 7 778 Subtilisin-like Serine Gene Family AT3G14067 50.4 1.8e-205 713.0
Cmetu01g2680 . 33 780 Subtilisin-like Serine Gene Family AT3G14240 77.1 0.0e+00 1203.0
Cmetu11g2491 . 36 776 Subtilisin-like Serine Gene Family AT3G14240 57.8 1.9e-242 835.9
Cmetu08g0313 . 26 757 Subtilisin-like Serine Gene Family AT3G14240 52.7 3.8e-219 758.4
Cmetu06g2577 . 28 768 Subtilisin-like Serine Gene Family AT3G14240 50.3 7.0e-213 737.6
Cmetu01g0950 . 29 762 Subtilisin-like Serine Gene Family AT3G14240 51.3 5.5e-210 728.0
Cmetu02g0782 . 28 758 Subtilisin-like Serine Gene Family AT3G14240 51.3 7.2e-210 727.6
Cmetu03g0720 . 36 768 Subtilisin-like Serine Gene Family AT3G14240 50.3 2.9e-203 705.7
Cmetu10g1284 . 26 768 Subtilisin-like Serine Gene Family AT3G14240 50.4 5.9e-196 681.4
Cmetu10g1389 . 27 569 Subtilisin-like Serine Gene Family AT4G00230 61.5 6.6e-195 677.6
Cmetu10g0342 . 4 568 Subtilisin-like Serine Gene Family AT4G00230 56.8 5.2e-184 641.3
Cmetu08g1074 . 40 584 Subtilisin-like Serine Gene Family AT4G00230 50.1 1.4e-144 510.4
Cmetu10g1545 . 53 517 Subtilisin-like Serine Gene Family AT4G00230 50.1 3.7e-121 432.6
Cmetu07g0008 . 58 760 Subtilisin-like Serine Gene Family AT4G10510 51.0 6.7e-202 701.0
Cmetu07g0008 . 34 760 Subtilisin-like Serine Gene Family AT4G10520 51.4 5.8e-204 708.0
Cmetu07g0008 . 34 760 Subtilisin-like Serine Gene Family AT4G10540 50.9 3.4e-207 718.8
Cmetu07g0008 . 58 760 Subtilisin-like Serine Gene Family AT4G10550 50.3 1.6e-198 689.9
Cmetu04g2572 . 12 835 Subtilisin-like Serine Gene Family AT4G20430 67.7 0.0e+00 1128.2
Cmetu12g2125 . 1 284 Subtilisin-like Serine Gene Family AT4G21320 76.5 1.6e-130 462.6
Cmetu12g1485 . 1 722 Subtilisin-like Serine Gene Family AT4G26330 55.9 2.1e-227 785.8
Cmetu05g0002 . 1 726 Subtilisin-like Serine Gene Family AT4G30020 80.5 0.0e+00 1211.1
Cmetu05g1568 . 1 288 Subtilisin-like Serine Gene Family AT4G30020 79.6 1.4e-131 467.6
Cmetu11g2491 . 35 776 Subtilisin-like Serine Gene Family AT4G34980 75.3 0.0e+00 1148.3
Cmetu01g2680 . 19 780 Subtilisin-like Serine Gene Family AT4G34980 54.2 5.1e-232 801.2
Cmetu08g0313 . 25 757 Subtilisin-like Serine Gene Family AT4G34980 51.6 3.5e-209 725.3
Cmetu06g2577 . 11 771 Subtilisin-like Serine Gene Family AT4G34980 50.3 4.6e-209 724.9
Cmetu02g0782 . 12 758 Subtilisin-like Serine Gene Family AT4G34980 50.2 4.0e-205 711.8
Cmetu04g1219 . 1 566 Subtilisin-like Serine Gene Family AT5G03620 56.2 2.2e-179 625.9
Cmetu08g1074 . 39 571 Subtilisin-like Serine Gene Family AT5G03620 59.1 6.0e-177 617.8
Cmetu10g1389 . 8 567 Subtilisin-like Serine Gene Family AT5G03620 50.6 1.2e-145 513.8
Cmetu10g0342 . 29 568 Subtilisin-like Serine Gene Family AT5G03620 50.4 1.2e-137 487.3
Cmetu10g1091 . 14 511 Subtilisin-like Serine Gene Family AT5G03620 51.6 3.3e-135 479.2
Cmetu10g0125 . 41 504 Subtilisin-like Serine Gene Family AT5G03620 52.2 1.1e-125 447.6
Cmetu02g0878 . 1 772 Subtilisin-like Serine Gene Family AT5G19660 79.9 0.0e+00 1295.0
Cmetu04g2572 . 34 609 Subtilisin-like Serine Gene Family AT5G44530 69.9 1.3e-241 832.8
Cmetu04g2446 . 125 810 Subtilisin-like Serine Gene Family AT5G45640 51.4 1.1e-191 667.2
Cmetu04g2446 . 77 810 Subtilisin-like Serine Gene Family AT5G45650 56.5 9.9e-239 823.5
Cmetu06g2577 . 12 770 Subtilisin-like Serine Gene Family AT5G51750 72.5 0.0e+00 1152.9
Cmetu08g0313 . 21 761 Subtilisin-like Serine Gene Family AT5G51750 53.2 2.7e-233 805.4
Cmetu03g0720 . 12 769 Subtilisin-like Serine Gene Family AT5G51750 51.2 3.7e-222 768.5
Cmetu02g0782 . 1 762 Subtilisin-like Serine Gene Family AT5G51750 50.3 5.9e-220 761.1
Cmetu10g0762 . 37 734 Subtilisin-like Serine Gene Family AT5G59190 50.3 5.7e-190 661.4
Cmetu10g1091 . 8 688 Subtilisin-like Serine Gene Family AT5G59190 50.5 1.7e-186 649.8
Cmetu09g1955 . 36 738 Subtilisin-like Serine Gene Family AT5G59190 50.4 1.5e-185 646.7
Cmetu10g1732 . 51 690 Subtilisin-like Serine Gene Family AT5G59190 50.5 1.0e-175 614.0
Cmetu06g1522 . 742 1484 Subtilisin-like Serine Gene Family AT5G59810 61.4 3.0e-264 908.3
Cmetu12g1308 . 6 769 Subtilisin-like Serine Gene Family AT5G59810 59.9 6.9e-261 897.1
Cmetu01g2108 . 11 787 Subtilisin-like Serine Gene Family AT5G59810 58.1 4.5e-260 894.4
Cmetu12g0778 . 18 770 Subtilisin-like Serine Gene Family AT5G59810 57.6 1.7e-246 849.4
Cmetu06g2569 . 55 764 Subtilisin-like Serine Gene Family AT5G59810 56.7 1.5e-231 799.7
Cmetu06g0629 . 27 753 Subtilisin-like Serine Gene Family AT5G59810 54.4 5.5e-226 781.2
Cmetu06g2527 . 8 752 Subtilisin-like Serine Gene Family AT5G59810 53.3 2.3e-224 775.8
Cmetu06g2346 . 38 739 Subtilisin-like Serine Gene Family AT5G59810 55.6 2.8e-222 768.8
Cmetu06g2390 . 25 650 Subtilisin-like Serine Gene Family AT5G59810 57.5 6.4e-198 688.0
Cmetu08g0313 . 8 762 Subtilisin-like Serine Gene Family AT5G67360 72.6 0.0e+00 1113.6
Cmetu03g0720 . 36 770 Subtilisin-like Serine Gene Family AT5G67360 66.4 9.0e-290 993.0
Cmetu02g0782 . 28 763 Subtilisin-like Serine Gene Family AT5G67360 56.0 1.3e-232 803.1
Cmetu06g2577 . 28 769 Subtilisin-like Serine Gene Family AT5G67360 54.1 4.1e-226 781.6
Cmetu01g0950 . 1 761 Subtilisin-like Serine Gene Family AT5G67360 54.5 9.5e-223 770.4
Cmetu01g2680 . 25 775 Subtilisin-like Serine Gene Family AT5G67360 51.8 8.3e-211 730.7
Cmetu11g2491 . 29 771 Subtilisin-like Serine Gene Family AT5G67360 51.3 1.5e-207 719.9
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000094 2 9 4 4 4 9 0 9 9 7 6 10 16 7 9 22 9 5 21 9 7 5 6 12 12 10 2 10 10 2 247