Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo01g00025 | ATGGGGGTGGATCAAACAAGTATCTTTCCTTCTGTCTGGCCTTTGCCGACTGTGGTCACCCAAGTATTTATTTTTAAGCAACCGAATCAACCTATACGATCCAATCTAGTGGGACCCGATTGTTTCTTGTCTTACTCTCGCCTTCTTCCTTTTGAGGTTGGTATCTCAGCTCCATTTCAGGAGTTCTTAATCATTTTGCAGCTGGGATTCGACCTGGATATCCTCGTTGCGTCACTTCAAGTTCATCTCCAGTCTGCACATATGGGATCGATAGAGGAGGGAACAAATTACCTATCTGACGAAGATATTCCATTGAAGGGAACACCAGTTGCGAAAAACTTATCGCATAGCTTTGACTGTGAGACGGTTCATGTGCGTTCCTCCCCAGATGATAAAAGATGGTGGAAGACTAACAACATTCGTTTTAGACCTCTTGAAAGTGCTAAAATAGTGTTGATTAAAGCAAAGATCAACGTGTTACTTCCGTTTGGTCCTTTGGCAATCCTGCTACATTATTTAACTGGAAAGCATGGTTTGGTCTTCTTTTTCACGTTACTTGGAATTACACCTTTGGCAGAACGTCTTGGTTATGCTACAGAGCAGCTTGCTTCCTATACTGGTCCAACAGTTGGTGGTCTTTTGAATGCAACATTTGGAAATGCAACCGAAATGATTATATCGATTTATGCATTAAAGAGTGGGATGATTAGGGTTGTTCAACAGTCGTTATTGGGATCAATCTTGTCGAATATGCTCCTAGTGCTTGGTTGCGCTTTCTTCACTGGTGGGATTGTTCATCATAAGAATGTGCAGACTTTCAATAAGGGTACTGCTGTTGTGAATTCAGGATTGTTGTTAATGGCTGTTATGGGAACAACGTTTCCGGCTGTGCTTCATTTCACCCACACAGAACTTCATTCTGGAGAGTCAGCATTGTCTCTTTCAAGGTTTAGCAGTTGTATAATGTTAATTGCATATGCAAGCTTCCTTTTCTTTCAACTAAAAAGTCAGCACAATCTCTATGGTTCTCTTGATGAGGAAGGTGATGGTGAAGTTGAGGAGGATCCTGAGATTTATGCTTGGGAAGCAATTGGGTGGCTTGCTATCTTGACTGTATGGGTATCGATTTTATCTGGATACCTTGTTGATGCTATCGAGGGAGCATCTGAATCATTACATTTGCCAGTGGCTTTTATAAGTGTAATTTTGTTGCCAATAGTTGGAAATGCTGCTGAACATGCAAGTGCAATCATGTTTGCCATGAAGGATAAGCTTAACATCACCCTTGGAGTTGCTATTGGATCATCAACACAAATATCCATGTTTGTGATCCCATTTTGCGTCGTTGTTGGATGGTGTATGGGAATACCAATGGACTTGAACTTTAAACTCTTTGAGACTGCAACTCTGTTTATAACTGTGCTAGTGGTGGCCTTTATGTTGCAGGAGGGGACGTCAAATTATTTCAAAGGTCTAATGCTTATTCTATGCTACCTCATTGTGGCAGCCAGCTTCTTTGTACATGTTGACCCTAGCAGTGTTGGAAATGCTGCTGAACATGCAAGTGCAATCATGTTTGCCATGAAGGATAAGCTTAACATCACCCTTGGAGTTGCTATTGGATCATCAACACAAATATCCATGTTTGTGATCCCATTTTGCGTCGTTGTTGGATGGTGTATGGGAATACCAATGGACTTGAACTTTAAACTCTTTGAGACTGCAACTCTGTTTATAACTGTGCTAGTGGTGGCCTTTATGTTGCAGCCAGCTTCTTTGTACATGTTGACCCTAGCAGTGATGATGATTAACCCTGGAAGCAAGTTGGTCCTGGAACTTTACTGCAAGCTGAAGTTCTGCATTGCATTAATCCTCAAACCACCACTGCTTCACTTCGTTGGAAGCTGCAGACATCAGATGGAGTTTGGTTTCGTTAGTTGA | 1941 | 41.73 | MGVDQTSIFPSVWPLPTVVTQVFIFKQPNQPIRSNLVGPDCFLSYSRLLPFEVGISAPFQEFLIILQLGFDLDILVASLQVHLQSAHMGSIEEGTNYLSDEDIPLKGTPVAKNLSHSFDCETVHVRSSPDDKRWWKTNNIRFRPLESAKIVLIKAKINVLLPFGPLAILLHYLTGKHGLVFFFTLLGITPLAERLGYATEQLASYTGPTVGGLLNATFGNATEMIISIYALKSGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHHKNVQTFNKGTAVVNSGLLLMAVMGTTFPAVLHFTHTELHSGESALSLSRFSSCIMLIAYASFLFFQLKSQHNLYGSLDEEGDGEVEEDPEIYAWEAIGWLAILTVWVSILSGYLVDAIEGASESLHLPVAFISVILLPIVGNAAEHASAIMFAMKDKLNITLGVAIGSSTQISMFVIPFCVVVGWCMGIPMDLNFKLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVDPSSVGNAAEHASAIMFAMKDKLNITLGVAIGSSTQISMFVIPFCVVVGWCMGIPMDLNFKLFETATLFITVLVVAFMLQPASLYMLTLAVMMINPGSKLVLELYCKLKFCIALILKPPLLHFVGSCRHQMEFGFVS | 646 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 90228 | 96753 | - | CmoCh01G000250.1 | Cmo01g00025 | 373508 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo01g00025 | 646 | TIGRFAM | cax: calcium/proton exchanger | 160 | 506 | IPR004798 | GO:0006816|GO:0015369 | |
Cmo01g00025 | 646 | PANTHER | VACUOLAR CATION/PROTON EXCHANGER | 92 | 512 | - | - | |
Cmo01g00025 | 646 | PANTHER | VACUOLAR CATION/PROTON EXCHANGER | 514 | 592 | - | - | |
Cmo01g00025 | 646 | TIGRFAM | caca2: calcium/proton exchanger | 147 | 506 | - | - | |
Cmo01g00025 | 646 | Gene3D | - | 208 | 347 | IPR044880 | - | |
Cmo01g00025 | 646 | Gene3D | - | 352 | 508 | IPR044880 | - | |
Cmo01g00025 | 646 | Gene3D | - | 512 | 604 | IPR044880 | - | |
Cmo01g00025 | 646 | PANTHER | VACUOLAR CALCIUM ION TRANSPORTER | 514 | 592 | IPR004713 | GO:0006812|GO:0008324|GO:0016021 | |
Cmo01g00025 | 646 | PANTHER | VACUOLAR CALCIUM ION TRANSPORTER | 92 | 512 | IPR004713 | GO:0006812|GO:0008324|GO:0016021 | |
Cmo01g00025 | 646 | Pfam | Sodium/calcium exchanger protein | 179 | 334 | IPR004837 | GO:0016021|GO:0055085 | |
Cmo01g00025 | 646 | Pfam | Sodium/calcium exchanger protein | 514 | 590 | IPR004837 | GO:0016021|GO:0055085 | |
Cmo01g00025 | 646 | Pfam | Sodium/calcium exchanger protein | 364 | 503 | IPR004837 | GO:0016021|GO:0055085 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g00025 | Cmo-Chr1:90228 | Cmo20g00692 | Cmo-Chr20:3416859 | 9.07E-35 | dispersed | |
Cmo01g00025 | Cmo-Chr1:90228 | Cmo14g01257 | Cmo-Chr14:10577187 | 8.54E-46 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo01g00025 | K07300 | - | csv:101219432 | 761.14 |