Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g00071 ATGAGTCGAGAGCAGAAGCGGGGGAAGCAGGACAAGGGTTCTGATGATGTCCAGAAGGTGATTGTTGCTGTGAAGGCTTCCAAAGAAATTCCTAAAACTGCATTGGTTTGGGCGTTGACTCATGTTGTTCATATTGGAGATTGCATAACTCTGCTTGTTGTTGTCCCTTCTCAAACCTCTGGTAGAAAATTCTGGGGTTTTCCAAGATTTTCCGGTGACTGTGCCAGCGGTCAAAAGAAAGCTCACTCTGGGACAACCTCGGAGCTGAAGTATGATATTAGTGATACCTGCTCGCAGATGATCCTGCAGCTTCATGATGTTTATGATCCAAATAAGATAAATGTGAAAATTAAAATTGTTTCTGGGTCACCTAGTGGGGCTGTAACTGCAGAGGCTAAGAGAGTTCATGCTTCCTGGGTTGTATTAGACAAACAGCTCAAACATGAGGAGAAATGCTGCATGGAAGAGTTGCAATGCAACATTGTGGTAATGAAGCGATCTCAGCCTAAAGTTCTTCGCTTGAACTTGGTTGGGTCTCAAAAAAAGGAACCACAAGTGCTCTCTCCCTTACCTTTTGATATAGATGAAGGGTCTGAAAGCCATCACAAGGAACATAATGATCCTCTGGATTTTATTCGAGGACCGGTTGTGACTCCCAGTAGCAGTCCAGAGTTGGGCACGCCTTTTACTGCGACGGAAGCTGGAACGTCGTCGGTGTCGAGCTCTGATCCTGGAACTTCACCATTTTTCAACTCTGAAATGAATGGAGATACAAAGAAAGAGGAATTATTTGTTATCAAGGAAAATAAAGAAGTAGATGCAGCTAGTTCTGACTTAGATATTGAAAATTTATCTGTATCTTCAGGGAGCTTAAGATTCCAACCATGGATGACAGAATTTCTAAGTTCTTCTCATCTTCAATCCTCACAACACATAACTGGAAGGTCACAGAGATTTGATGATCTGAACCAAATGTCAACAAGAAAAGCTTTTCAACCAAAGTTTACGAAACTTGATCGAGAAGCTCGAATTGAAATGTCAAGCCATAGAAGTGACAATGATTTTCATGGGGACGTTCGAGATGCAGTTTCGTTATCCAGGAACTCGCCACCAGGACCGCCTCCATTATGCTCAATATGTCAACACAAGGCACCAGTTTTTGGGAAGCCTCCAAGGTGGTACAGCTACGCTGAGCTTGAGCTCGCTACAGGTGGATTTTCACAAGCCAACTTTCTTGCAGAAGGGGGATATGGATCTGTTCACAGAGGGGTACTCCCGGACGGTCAGGTGGTTGCTGTCAAGCAGCACAAACTAGCTAGCTCTCAGGGAGACCATGAATTTTGTTCAGAGGTCGAAGTTCTTAGCTGTGCACAACATCGAAACGTTGTGATGTTGATTGGCTTTTGTATAGAGGAGAAAAAAAGGTTACTGGTTTATGAGTACATCTGCAATGGCTCATTGGATTCTCATTTATATGGACGCCAACAAGAGCCATTAGGATGGACTGCACGGCAGAAAATTGCCGTGGGAGCAGCGAGGGGGCTACGATATCTCCATGAAGAATGTAGAGTAGGTTGCATTGTTCACCGGGATATGCGGCCGAACAACATTCTTATCACCCATGATTTTGAACCACTGGTTGGAGATTTTGGCCTTGCGAGGTGGCAGCCTGATGGCGATACCGGCGTTGAGACAAGAGTTATTGGAACATTTGGGTATTTGGCTCCGGAGTATGCTCAAAGTGGCCAAATCACAGAGAAAGCTGATGTTTATTCCTTTGGGGTAGTACTGGTGGAGCTAATCACGGGAAGAAAAGCTGTAGACCTTGGTCGGCCGAAAGGTCAACAGTGTCTCACTGAATGGGCACGCCCCCTGTTGGATGAACTTGTGATTGATGAACTGATTGATCCGAGGTTGGGGAATAGCTTCACAGAGCATGAGGTGTACTGCATGGTGCACGCCGCATCGTTATGCATCCGAAGGGATCCTAACGCCAGGCCTCGTATGTCACAGGTTTTACGGATTCTGGAGGGCGACCTCGTCGTGGATGCTAATTACTTGTCAACTCCGGGATACGATGTGGGAAATCGGAGTGGACGGATGTGGACCGAGCAGCAGCAGCAAAACTACAGTGGGTCCTTTTCAGAAGAGCCCATAGAGAGGTTGAATGAAAAGGTGTGTGTTGAGAGTTTAAGACCAAGTTACTGGGAAAGGGACAGCAGGACAGGGAGGACTTCAAGTGGAAGTGATTTGTAA 2256 45.79 MSREQKRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVHIGDCITLLVVVPSQTSGRKFWGFPRFSGDCASGQKKAHSGTTSELKYDISDTCSQMILQLHDVYDPNKINVKIKIVSGSPSGAVTAEAKRVHASWVVLDKQLKHEEKCCMEELQCNIVVMKRSQPKVLRLNLVGSQKKEPQVLSPLPFDIDEGSESHHKEHNDPLDFIRGPVVTPSSSPELGTPFTATEAGTSSVSSSDPGTSPFFNSEMNGDTKKEELFVIKENKEVDAASSDLDIENLSVSSGSLRFQPWMTEFLSSSHLQSSQHITGRSQRFDDLNQMSTRKAFQPKFTKLDREARIEMSSHRSDNDFHGDVRDAVSLSRNSPPGPPPLCSICQHKAPVFGKPPRWYSYAELELATGGFSQANFLAEGGYGSVHRGVLPDGQVVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIEEKKRLLVYEYICNGSLDSHLYGRQQEPLGWTARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELITGRKAVDLGRPKGQQCLTEWARPLLDELVIDELIDPRLGNSFTEHEVYCMVHAASLCIRRDPNARPRMSQVLRILEGDLVVDANYLSTPGYDVGNRSGRMWTEQQQQNYSGSFSEEPIERLNEKVCVESLRPSYWERDSRTGRTSSGSDL 751
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 295611 300772 - CmoCh01G000710.1 Cmo01g00071 373554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g00071 751 ProSitePatterns Tyrosine protein kinases specific active-site signature. 527 539 IPR008266 GO:0004672|GO:0006468
Cmo01g00071 751 Gene3D Transferase(Phosphotransferase) domain 1 482 685 - -
Cmo01g00071 751 PANTHER OS01G0253100 PROTEIN 15 711 IPR045271 GO:0004714|GO:0006468
Cmo01g00071 751 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 15 711 - -
Cmo01g00071 751 SUPERFAMILY Protein kinase-like (PK-like) 390 684 IPR011009 -
Cmo01g00071 751 ProSiteProfiles Protein kinase domain profile. 406 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo01g00071 751 Gene3D Phosphorylase Kinase; domain 1 378 481 - -
Cmo01g00071 751 Gene3D HUPs 3 151 IPR014729 -
Cmo01g00071 751 Pfam Protein tyrosine and serine/threonine kinase 410 675 IPR001245 GO:0004672|GO:0006468
Cmo01g00071 751 CDD USP_Like 19 142 - -
Cmo01g00071 751 CDD STKc_IRAK 412 678 - -
Cmo01g00071 751 MobiDBLite consensus disorder prediction 220 254 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g00071 Cmo14g01304 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00071 Cmo-Chr1:295611 Cmo15g00209 Cmo-Chr15:1017698 1.74E-97 dispersed
Cmo04g02526 Cmo-Chr4:18577828 Cmo01g00071 Cmo-Chr1:295611 2.62E-106 transposed
Cmo09g00177 Cmo-Chr9:788703 Cmo01g00071 Cmo-Chr1:295611 0 transposed
Cmo01g00071 Cmo-Chr1:295611 Cmo10g00735 Cmo-Chr10:3362845 0 wgd
Cmo01g00071 Cmo-Chr1:295611 Cmo11g00692 Cmo-Chr11:3335644 0 wgd
Cmo01g00071 Cmo-Chr1:295611 Cmo14g01304 Cmo-Chr14:10897387 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74006 PF07714 PK_Tyr_Ser-Thr 8.10E-41 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g00071 - - csv:101206876 1352.81