Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo01g00092 | ATGTCGTGGCAATCTTACATTGATGATCAATTGATGTATGATGTCGATGGCCATCATCTCCAAGCCGCTGCTATAATCGGGAACGACGGTGCTGTTTGGGCTCAGAGCCCCGCTTTCCCCAAGTTCAAGCCAGAAGAGATGTCTGCCATTATGAAGGATTTTGATGAGCCTGGATCTCTTGCCCCGACTGGTTTGCACCTTGCTGGATCAAAGTACATGGTTATCCAGGGGGAATCTGGAGCTGTTATCCGTGGAAAGAAGGGCACTTCTGGGCTCACTGTAAAGAAAACAAACCAAGCACTCGTTTTTGGGTTATATGATGAACCCATGACTCCAGGACAGTGCAACATGATTGTCGAGAAGTTGGGAGATTACCTGATTGATCAAGGCATGTAA | 396 | 47.22 | MSWQSYIDDQLMYDVDGHHLQAAAIIGNDGAVWAQSPAFPKFKPEEMSAIMKDFDEPGSLAPTGLHLAGSKYMVIQGESGAVIRGKKGTSGLTVKKTNQALVFGLYDEPMTPGQCNMIVEKLGDYLIDQGM | 131 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 420219 | 421683 | + | CmoCh01G000920.1 | Cmo01g00092 | 373575 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo01g00092 | 131 | CDD | PROF | 2 | 131 | IPR005455 | GO:0003779 | |
Cmo01g00092 | 131 | Pfam | Profilin | 1 | 131 | IPR005455 | GO:0003779 | |
Cmo01g00092 | 131 | SUPERFAMILY | Profilin (actin-binding protein) | 2 | 131 | IPR036140 | - | |
Cmo01g00092 | 131 | PANTHER | PROFILIN | 1 | 131 | IPR005455 | GO:0003779 | |
Cmo01g00092 | 131 | ProSitePatterns | Profilin signature. | 1 | 8 | IPR027310 | GO:0003779 | |
Cmo01g00092 | 131 | PRINTS | Profilin signature | 3 | 12 | IPR005455 | GO:0003779 | |
Cmo01g00092 | 131 | PRINTS | Profilin signature | 21 | 30 | IPR005455 | GO:0003779 | |
Cmo01g00092 | 131 | PRINTS | Profilin signature | 40 | 60 | IPR005455 | GO:0003779 | |
Cmo01g00092 | 131 | PRINTS | Profilin signature | 64 | 78 | IPR005455 | GO:0003779 | |
Cmo01g00092 | 131 | PRINTS | Profilin signature | 100 | 113 | IPR005455 | GO:0003779 | |
Cmo01g00092 | 131 | PRINTS | Profilin signature | 113 | 130 | IPR005455 | GO:0003779 | |
Cmo01g00092 | 131 | PANTHER | PROFILIN-A | 1 | 131 | - | - | |
Cmo01g00092 | 131 | Gene3D | Dynein light chain 2a, cytoplasmic | 1 | 131 | - | - | |
Cmo01g00092 | 131 | PRINTS | Plant profilin signature | 1 | 14 | IPR005455 | GO:0003779 | |
Cmo01g00092 | 131 | PRINTS | Plant profilin signature | 27 | 40 | IPR005455 | GO:0003779 | |
Cmo01g00092 | 131 | PRINTS | Plant profilin signature | 52 | 66 | IPR005455 | GO:0003779 | |
Cmo01g00092 | 131 | PRINTS | Plant profilin signature | 71 | 80 | IPR005455 | GO:0003779 | |
Cmo01g00092 | 131 | PRINTS | Plant profilin signature | 84 | 99 | IPR005455 | GO:0003779 | |
Cmo01g00092 | 131 | PRINTS | Plant profilin signature | 104 | 117 | IPR005455 | GO:0003779 | |
Cmo01g00092 | 131 | PRINTS | Plant profilin signature | 117 | 130 | IPR005455 | GO:0003779 | |
Cmo01g00092 | 131 | SMART | prof_2 | 1 | 131 | IPR005455 | GO:0003779 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo01g00092 | Cmo08g00707 | CCT | |
Cmo01g00092 | Cmo17g00727 | CCT | |
Cmo01g00092 | Cmo08g00707 | ECH | |
Cmo01g00092 | Cmo17g00727 | ECH | |
Cmo01g00092 | Cmo14g01321 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g00092 | Cmo-Chr1:420219 | Cmo12g01309 | Cmo-Chr12:11468872 | 1.20E-67 | dispersed | |
Cmo01g00092 | Cmo-Chr1:420219 | Cmo14g01321 | Cmo-Chr14:11035489 | 1.40E-88 | wgd | |
Cmo01g00092 | Cmo-Chr1:420219 | Cmo17g00727 | Cmo-Chr17:7272105 | 3.98E-73 | wgd | |
Cmo01g00092 | Cmo-Chr1:420219 | Cmo05g01377 | Cmo-Chr5:10670019 | 1.17E-74 | wgd | |
Cmo01g00092 | Cmo-Chr1:420219 | Cmo08g00707 | Cmo-Chr8:4469155 | 1.77E-75 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo01g00092 | K05759 | - | csv:101218089 | 248.825 |