Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g00094 ATGGGGAAGGCGATGAGATTGTTGAGGGCCTTATTGGGAATGAGGAGAGACAAGAATGCCGATCACAATTCATGTTTGCCCGCCGATGGTGAAAACAAAGAGAGGAATCGGTGCAGTTTTTCAAAATCCGGGAAGGAATTCACCGGAGAAGTTCAGAAGCTGCCACCGCCGCCGAGAATGGCGGATGCTGATTGCCAGAGATCTTGTCCTGCAGAGGAAGAGCGTAATGAACATGCGATCGCTGTCGCAGCAGCATCGGCTGCTGCTGCTGATGCTGCTGTGGCGGCGGCTCAAGCGGCGGTGGCGGTTGTTATGCTTACCAACCAAACTAGAGGAGGTGGTTTGTTCAATGGAGGGAAGGTGATTTCGGCTGCTCTTACAATTCAAAAGGTTTTCAGAGGCTTTTTGGCGAGGAAGGCACTTCAAGCATTAAGAAGTTTGGTCAAATTACAGGCTTTAGTTAGAGGCTTTCTCGTTCGAAAACGAGCAGCCGCCACATTACAGAGCATGCAAGCTCTAATCCGAGCACAAACCACCGTCCGATCGCAACGAGCTCGTCGTTCAAGCAACAAAGAGAACAAATCCCTGCTGGAAAAGTCTCCGGATATCGGCGACGTCAGATTTCTTTTCTCGGACGAAATCGAAGACCCCAAAATCGTGGAAATCGACAAACTATTCCAGAAACCCAAATCGAGGTCCCGGCATTTCAACAACCTCCTCTCGGACCTTGCCGACGACCGGCCGTCGCCGTACCTCTGGACAATGGCTTCGCCGGCCAGATTCTCAGGCGGGGAGTGGTGTTTCACCGGCGGAGAGGAGTGTGGGAGGATGTCGACAGCCCAGAGCACGCCGCGTGTGCGGAACTACGGGTGGACGACGGCGGCGGCGACAGCGACGCCGGCAAGGGTGGTGTACGGCGAAGGGTTTTTCCGTCCGTTTACGAATTTTCCGAATTATATGGCGAGTACGAAATCGTTTAAGGCGAAATCGAGGTCGCGAAGCGCGCCGAAACAGAGGGCGGAGGGTTGGACGAAGAACAGAGTGGCGTTGAATGAGATTATGGGAGGCAGGAACAGCACCAGCGGCGTGAGAATGCAGAAATACTGTCATCGGATTGAAGGAGATGAAGGACCTGTACTCTGGAGCCCTTCTTGGAGTGAAGTAAGAACTCGTGTGGAGATTTCCTCCTCTTCTCTCAAGATCAGAAACAAAAAAAAACCCAAGGGAAGATTCGCCGCTGATCTTGGTGAGGAAAACGGACGAAACGACGAGATCGGAGAGACTACCCAAGAACGGAGGAGGGAGAAAACCGCCGGCGTACCACGTGGCAACCAGCTAGAGGGCCGCGTGCGCCAATCGCCCCCGGACACGCGTCGAGCGCCGCCTGGGAAAACGCGGCTCCAGCTCTCCTGCAACACGCGTCTCTGGCTACGCGACCCGGACCCGCGACCCGCGACCCGCGACTGCAGAAATCTCTGGGCGCGTGACACTCGCGCGTGGGATCTGCGAGTGGCTGCTCCCCGGCGTGTGACTGGCGCGTGGAGGCGCGTGTACGTGAGGCGTCGAGTCAAGAGAGGGCGCGTCGATCGATGTGGGTTGTCACAGAGGAAGCGTGTCCCGGGGCCAAGGCTTGCCCTGGCTGGCATGGTTGCATGGCGATCAATATCAATGATTCCCCTATTGTACAACCAAAACTCCCAACATAGATGGGCCAATTTAACGTTGTAA 1728 55.38 MGKAMRLLRALLGMRRDKNADHNSCLPADGENKERNRCSFSKSGKEFTGEVQKLPPPPRMADADCQRSCPAEEERNEHAIAVAAASAAAADAAVAAAQAAVAVVMLTNQTRGGGLFNGGKVISAALTIQKVFRGFLARKALQALRSLVKLQALVRGFLVRKRAAATLQSMQALIRAQTTVRSQRARRSSNKENKSLLEKSPDIGDVRFLFSDEIEDPKIVEIDKLFQKPKSRSRHFNNLLSDLADDRPSPYLWTMASPARFSGGEWCFTGGEECGRMSTAQSTPRVRNYGWTTAAATATPARVVYGEGFFRPFTNFPNYMASTKSFKAKSRSRSAPKQRAEGWTKNRVALNEIMGGRNSTSGVRMQKYCHRIEGDEGPVLWSPSWSEVRTRVEISSSSLKIRNKKKPKGRFAADLGEENGRNDEIGETTQERRREKTAGVPRGNQLEGRVRQSPPDTRRAPPGKTRLQLSCNTRLWLRDPDPRPATRDCRNLWARDTRAWDLRVAAPRRVTGAWRRVYVRRRVKRGRVDRCGLSQRKRVPGPRLALAGMVAWRSISMIPLLYNQNSQHRWANLTL 575
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 424535 431438 - CmoCh01G000940.1 Cmo01g00094 373577
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g00094 575 MobiDBLite consensus disorder prediction 408 440 - -
Cmo01g00094 575 Pfam IQ calmodulin-binding motif 146 162 IPR000048 GO:0005515
Cmo01g00094 575 Pfam IQ calmodulin-binding motif 123 141 IPR000048 GO:0005515
Cmo01g00094 575 PANTHER IQ-DOMAIN 5-RELATED 1 372 - -
Cmo01g00094 575 Pfam Protein of unknown function (DUF4005) 283 352 IPR025064 -
Cmo01g00094 575 MobiDBLite consensus disorder prediction 397 465 - -
Cmo01g00094 575 ProSiteProfiles IQ motif profile. 145 172 IPR000048 GO:0005515
Cmo01g00094 575 PANTHER - 1 372 - -
Cmo01g00094 575 Gene3D - 119 169 - -
Cmo01g00094 575 ProSiteProfiles IQ motif profile. 123 149 IPR000048 GO:0005515
Cmo01g00094 575 SMART iq_5 120 142 IPR000048 GO:0005515
Cmo01g00094 575 SMART iq_5 143 164 IPR000048 GO:0005515
       

Event-related genes


       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00094 Cmo-Chr1:424535 Cmo14g01779 Cmo-Chr14:13719051 1.66E-29 dispersed
Cmo01g00094 Cmo-Chr1:424535 Cmo10g00702 Cmo-Chr10:3221407 2.24E-69 wgd
Cmo01g00094 Cmo-Chr1:424535 Cmo11g00664 Cmo-Chr11:3196822 2.50E-68 wgd
Cmo01g00094 Cmo-Chr1:424535 Cmo14g01322 Cmo-Chr14:11042130 8.01E-163 wgd
Cmo01g00094 Cmo-Chr1:424535 Cmo17g00728 Cmo-Chr17:7275951 5.58E-67 wgd
Cmo01g00094 Cmo-Chr1:424535 Cmo08g00706 Cmo-Chr8:4464506 4.07E-81 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g00094 - - cmos:111457981 469.929