Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g00172 ATGCTGAAGCTGGTCTTGAAAGGGGGAAGTAGGCCGCCATGGGTGGGCTTGGCTGCTGCTGTTTGGGTTCAAATAGCTAGTGCTTCTTCTTATAACTTTTCTCTTTATTCCCATTTCCTTAAATCCGTTCTGGGTTTGAATCAGCAGCAGCTTACGATACTCGGAGTGGCTAATGACATAGGGGAGAGCGTGGGGCTGCTTCCTGGACTTGCTTGCAACATATTTCCTCCTTGGGCATTGGTTTTGGTTGGTTCTGTGTGTTGCTTTCTGGGCTATGGAGCTATTTGGCTTGCTGTTAGCAGAACTCTCCCCAGTATGCCTTATTGGCTGCTATTTCTCACACATTGTATTGCTACAAATAGCAATGCATGGTTCGCAACGGCTGTGCTGGTAACCAACATGAGGAACTTCCCGCTCAGCAGAGGTACTGTTGCTGGCATTCTGAAAGGCTATGCCGGGCTTGGTGCTGCTGTATACACAGTGATATACAGCTTGATTTTCAGGAAGTCAGCTTCGGATTTGCTGCTGTTTCTTGCAATAGGGATACCCATTTTTGGCATAGCCTTGATGTACTTTGTTCGGCCTTGTACTCCGGCTGCTTCAGAGGATCCATTTGAGCGTGGCCATTTTCTTTTCACACAAGCTGCTTGTGTCTCGCTAGCTGTTTTTCTAGTCTCCACCACAATTCTATATGCAAAAACCACCCCTAGTGATGCTGTGGCATACCTCTTAGTTGCCATAATGGTTGTTCTGTTAATGTCTCCTCTTGCAGTTCCCATAAAAATGACCATTTGTTCTACAAAGACGAAGAAACTCGAGCCTCAAGTTGAATCTGCCGAAGCTTTAGCTTCTGGAGAAAGCGATTCGTCGTCCGAAATAGAACCCTTATTGACACCATCTTCCTCATCTACAAATCTTAGAAGTTTCTATGAGAATGATGATGATGGATCAGATGCAGAAACACTTCTTGCTTTAGGAGAGGGGGGCATTCATAAGGAGAAGAGAAGACCTAAAAGAGGGGAAGATTTCAATTTCCATGAAGCTGTTATCAAAGCTGATTTTTGGCTGCTTTGGTTCTCGTACTTCCTCGGGGTCGGTCCGGGAATAACGATTCTCAACAATTTGTCTCAAATTGGGATTTCTTTAGGTGTTAACGACTCGACGTTGCTGTTGGCTCTTTTCAGCTTATGCAACTTTATCGGTCGTTTAGGCTCCGGTGTTATTTCCGAACACTTCGTCAGGTCAAGAACAATACCACGGTCGCTGTGGATGATGTTTGCACTGATACTCATGGCTATAGCATTCCTCCTATATGCGTCTGGCCTCACGGGTACTCTCTACATTGCCACAGGTTTCACTGGTATCAGTTTTGGAGTTCTATATTCTATGATGATCCCTATGGCATCTGAGATTTTTGGCCTCAAGAACTTTGGAGTGATCTTAAACTTCATGCTGCTGGGGAATCCAATTGGAGCAGCTCTTTTCTCAGTTTTTCTAGCCAGTACTTTATACGACATTGAGGCTGCGAAGCAAGGTTCGATAACCTGCATCGGCCAACAGTGTTTTAGAATCACTTTTTTCGTTCTTTCAGGCGTGGCGGGGTTCGGTTCGATCTTAAGCTTAATTCTTACAATTCGATTGAGGCCAGTCTATCGAATGCTTTACTCCAGTGGTTCATTCCGCTTGCCTCTAAGTACAGTTTATTGA 1707 44.93 MLKLVLKGGSRPPWVGLAAAVWVQIASASSYNFSLYSHFLKSVLGLNQQQLTILGVANDIGESVGLLPGLACNIFPPWALVLVGSVCCFLGYGAIWLAVSRTLPSMPYWLLFLTHCIATNSNAWFATAVLVTNMRNFPLSRGTVAGILKGYAGLGAAVYTVIYSLIFRKSASDLLLFLAIGIPIFGIALMYFVRPCTPAASEDPFERGHFLFTQAACVSLAVFLVSTTILYAKTTPSDAVAYLLVAIMVVLLMSPLAVPIKMTICSTKTKKLEPQVESAEALASGESDSSSEIEPLLTPSSSSTNLRSFYENDDDGSDAETLLALGEGGIHKEKRRPKRGEDFNFHEAVIKADFWLLWFSYFLGVGPGITILNNLSQIGISLGVNDSTLLLALFSLCNFIGRLGSGVISEHFVRSRTIPRSLWMMFALILMAIAFLLYASGLTGTLYIATGFTGISFGVLYSMMIPMASEIFGLKNFGVILNFMLLGNPIGAALFSVFLASTLYDIEAAKQGSITCIGQQCFRITFFVLSGVAGFGSILSLILTIRLRPVYRMLYSSGSFRLPLSTVY 568
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 758137 760615 - CmoCh01G001720.1 Cmo01g00172 373655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g00172 568 SUPERFAMILY MFS general substrate transporter 206 549 IPR036259 -
Cmo01g00172 568 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 565 - -
Cmo01g00172 568 CDD MFS_Mch1p_like 12 536 - -
Cmo01g00172 568 Pfam Nodulin-like 13 260 IPR010658 -
Cmo01g00172 568 SUPERFAMILY MFS general substrate transporter 11 200 IPR036259 -
Cmo01g00172 568 MobiDBLite consensus disorder prediction 277 309 - -
Cmo01g00172 568 MobiDBLite consensus disorder prediction 282 309 - -
Cmo01g00172 568 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 565 - -
Cmo01g00172 568 Gene3D MFS general substrate transporter like domains 351 550 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00172 Cmo-Chr1:758137 Cmo15g00075 Cmo-Chr15:395182 6.04E-115 dispersed
Cmo01g00172 Cmo-Chr1:758137 Cmo14g01400 Cmo-Chr14:11493196 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g00172 - - csv:101211550 919.072