Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g00187 ATGGACACAGAGGAAGTTCCTTCGCCTGTGACGCCGGGGACGCCCGGAGCCCCACTGTTTGGAGGACACAAGGGGAATCACCATGGAAGTGAGAATGGAAAAAGGTCTCTTCTCAAGAGCTGCATCTCCTTCAATATTGGTGATTGGGGCACCGAAGAAGGAAGCTTATCTAAAGTCTCACTTGCAAGGAAGGTTGGAGCGGAGTTCATTGGCACTCTGATGCTCATCTTTGCTGGAACTGCCACTGCTATCGTGAACCAAAAGATACAAGGAACTGAAACGCTCATTGGCCTAGCAGCCTCCACAGGCATGACAGTGATGGTTGTCATCTTATCGACCGGCCACATCTCCGGAGCCCATCTGAACCCAGGCATCACCATTGCTTTCGCTGCACTAAAGCACTTTCCATGGAAGCAGGTGCCGGTGTATATTGGAGCTCAAATAGTAGCTTCTCTATGTGCGTCATTTGCATTGAAATGGATATTTGACCCCTTTATGGGTGGAGGAGTGACTGTTCCTTCATGTGGATATTCTCAAGCTTTTGCTCTTGAGTTTATCATTAGCTTCAACCTCATGTTTGTCATTACCGCCGTTGCCACCGATACTCGGGCTGTGGGAGAGTTGGCGGGAATCGCGGTGGGAGCAACAGTCATGCTCAATGTCCTCATCGCCGGGGAAACGACTGGAGCTTCAATGAATCCAGTGAGAACACTGGGGCCAGCCATTGCTGCAAACAATTTTAGAGCCATATGGATTTACCTCACAGCTCCCATACTAGGGACATTGTGTGGAGCTGGAATCTACACTGCAATTAAGTTGCCTGACCAAGATGGCGATGCACGCTTGCCTTCCACTGCAAGAAGCTTTCGAAGATGA 876 49.77 MDTEEVPSPVTPGTPGAPLFGGHKGNHHGSENGKRSLLKSCISFNIGDWGTEEGSLSKVSLARKVGAEFIGTLMLIFAGTATAIVNQKIQGTETLIGLAASTGMTVMVVILSTGHISGAHLNPGITIAFAALKHFPWKQVPVYIGAQIVASLCASFALKWIFDPFMGGGVTVPSCGYSQAFALEFIISFNLMFVITAVATDTRAVGELAGIAVGATVMLNVLIAGETTGASMNPVRTLGPAIAANNFRAIWIYLTAPILGTLCGAGIYTAIKLPDQDGDARLPSTARSFRR 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 811419 813678 - CmoCh01G001870.1 Cmo01g00187 373670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g00187 291 PANTHER AQUAPORIN NIP2-1 9 279 IPR034294 -
Cmo01g00187 291 SUPERFAMILY Aquaporin-like 58 276 IPR023271 -
Cmo01g00187 291 PRINTS Major intrinsic protein family signature 63 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo01g00187 291 PRINTS Major intrinsic protein family signature 102 126 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo01g00187 291 PRINTS Major intrinsic protein family signature 139 158 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo01g00187 291 PRINTS Major intrinsic protein family signature 183 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo01g00187 291 PRINTS Major intrinsic protein family signature 214 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo01g00187 291 PRINTS Major intrinsic protein family signature 251 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo01g00187 291 MobiDBLite consensus disorder prediction 1 32 - -
Cmo01g00187 291 PANTHER BNAA02G36290D PROTEIN 9 279 - -
Cmo01g00187 291 Pfam Major intrinsic protein 56 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo01g00187 291 Gene3D Glycerol uptake facilitator protein. 47 280 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00187 Cmo-Chr1:811419 Cmo15g01411 Cmo-Chr15:9615452 7.77E-106 dispersed
Cmo01g00187 Cmo-Chr1:811419 Cmo02g00977 Cmo-Chr2:6022903 2.50E-126 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g00187 K09874 - csv:101207376 501.516