Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g00190 ATGCCGATCAGCACCTCTGCAGTTTCAGGCCACACGGTGTGTGTCACCGGCGCCGGAGGCTTCATTGCTTCTTGGCTTGTGAAGCTCCTTCTCCAAAAGGGCTACACCGTTAGAGGAACTGTCAGAAACGCTGATGATCAAAAGAATGCTCATTTGAAAGAGCTGGAAGGAGCTAAAGACAGGCTGTCTTTGTTCAGTGCTGATCTTCTTGATTTTGATAGCCTTAAAGCTGCCATTACCGGCTGCGATGGCGTCTTCCACACCGCCTCTCCGGTCACCGACGATCCCGAAAAGGTGGAACAAGCCATAATTGGGACAAAGAACGTCATGGCTGCCGCTGCCGAAGCTAAAGTTCGACGGGTAGTGTTCACGTCGTCGATCGGTACCGTCTACATGAACCCTAACCGGAGCCCAGATACAGTGGTGGATGAGTCTTGTTGGAGTGATCTCGAGTTTTGCAAGAACACCAAGAATTGGTATTGCTATGCAAAGACAATAGCTGAACAAACAGCATGGGAAGTGGCAAAAGAACAAGGAGTGGATTTGGTAGTGGTGAATCCAATGCTGGTTTTGGGGCCTTTGCTGCAAGCTGGTGTGAATGCAAGCGTTGTTCATATAATGAAGTATCTGACAGGATCTGCAAAGACATATGTAAATGCTGTACAAGGTTACGTGGATGTTAAGGATGTTGCAAAAGCTCATGTTTTGGTCTATGAAACTCCTTCAGCTTCAGGCAGATACATCTGTGTGGAAAGCATGCTTCACCGTGGTGAATTGGTTGAGATTCTTACCAAGTTCTTCCCTGAATATCCCATTCCGACCAAGTGTTCTGATGAGGTGAATCCCAAGAAGAAACCTTACAAGTACACTGTGGAGAAGCTGAAGTCATTGGGAATGGAGTTTACACCTATCAAACAATGCATATATGAAACTGTGAAGAGCTTACAAGAAAAGGGTCATCTTCCTCTTCCTTCCCAATTTCAACATTGA 990 46.36 MPISTSAVSGHTVCVTGAGGFIASWLVKLLLQKGYTVRGTVRNADDQKNAHLKELEGAKDRLSLFSADLLDFDSLKAAITGCDGVFHTASPVTDDPEKVEQAIIGTKNVMAAAAEAKVRRVVFTSSIGTVYMNPNRSPDTVVDESCWSDLEFCKNTKNWYCYAKTIAEQTAWEVAKEQGVDLVVVNPMLVLGPLLQAGVNASVVHIMKYLTGSAKTYVNAVQGYVDVKDVAKAHVLVYETPSASGRYICVESMLHRGELVEILTKFFPEYPIPTKCSDEVNPKKKPYKYTVEKLKSLGMEFTPIKQCIYETVKSLQEKGHLPLPSQFQH 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 825389 826989 + CmoCh01G001900.1 Cmo01g00190 373673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g00190 329 CDD FR_SDR_e 13 298 - -
Cmo01g00190 329 Coils Coil 41 61 - -
Cmo01g00190 329 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 8 324 - -
Cmo01g00190 329 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 316 IPR036291 -
Cmo01g00190 329 PANTHER CINNAMOYL-COA REDUCTASE 8 324 - -
Cmo01g00190 329 Pfam NAD dependent epimerase/dehydratase family 13 243 IPR001509 -
Cmo01g00190 329 Gene3D - 3 329 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00190 Cmo-Chr1:825389 Cmo14g01074 Cmo-Chr14:5943038 0 dispersed
Cmo01g00189 Cmo-Chr1:822203 Cmo01g00190 Cmo-Chr1:825389 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g00190 K09753 - csv:116401668 605.905