Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo01g00191 | ATGGCTGCTGGAGGGCCTAATTCTGGGCAGCCACAGTTCTTTTCTAGGGCTGGAGATGAGAGTTTTTCGCACGCGCCATTGATCGAGAACACAGAAACTGATCAGATTGTTGTTCCTGATAAAAAAAGCTGGAAGAACCTTTTTGCATACATGGGCCCGGGATTTCTTGTTTCTATTGCTTATATTGATCCTGGGAATTTTGAAACTGATCTACAATCTGGAGCACAGTACAAGTATGAGTTGCTTTGGATCATATTACTGGCTTCTTGCGCCGCCCTCGTCATACAATCTTTAGCAGCAAATCTAGGAGTTGTCACAGGAAAACATTTAGCAGAGCACTGTAAAGCTGAGTACCCCAAGGTGCAAAATTTCATCCTATGGATCCTTGCTGAAATTGCAATTGTTGCATGTGATATTCCCGAAGTTATAGGAACCGCTTTTGCATTGAATATGCTCTTCAGCATTCCTATTTGGTGCGGGGTTCTTCTGACAGGGCTTAGTACTCTACTCCTCCTTGCGCTGCAGCAATATGGGATTAGAAAGCTCGAATTCTTGATTGCATTTCTTGTATTGACAATTGCAATTTGCTTCTTTCTGGAGTTGGGCTATGCACAGCCCGATGTCGGAGAAATTTTTTATGGGTTATTTGTCCCTCAATTAAAAGGAAGTGGTGCTACTGGTCTTGCAATTTCACTTCTTGGTGCTATGGTTATGCCACACAATCTCTTTCTTCACTCTGCACTGGTGCTCTCTAGGAAAATACCCCGATCCATTCCTGGCATCAAGGAAGCTTGCAGATTTTATATGATAGAGAGTGGCTTTGCTCTTTTGGTGGCTTTCTTCATTAACGTGGCCGTCATTTCAGTTAGTGGCGCGGTTTGCAATTCCCCAGATCTAAATAAGGAGGACCAAATGAGTTGCAGTGACTTGGACTTGAATGAAGCTTCATTTTTATTGAGAAATGTATTGGGTAAATGGAGTTCCAAACTTTTTGCCATTGCTTTGTTAGCATCTGGTCAGAGTTCTACCATAACAGGAACCTATGCAGGGCAGTATGTCATGCAGGGGTTTCTCGATTTGAAACTGATGCCATGGATCCGAAACTTTTTAACGCGAAGCTTAGCGATTGTTCCTAGTTTGATTGTTGCAATCATTGGTGGGCCTTCTGGGGCTGGGAAGTTGATCATTATCTCATCGATGATTTTGTCGTTTGAACTCCCTTTTGCTCTCATTCCCCTTTTGAAGTTTACGAGCAGCGAGACGAAGATGGGTCCACATGTCAACTCCCTCGCGATTACGATACTGACATGGATCATCGGTTTCCTCATCATGGCTATAAATATATACTACCTCATAACCCGTTTCGTCCATGTGCTTATTCACAGTGATCTCCAACTCGCAGCAGTCATCTTCATAGGGATACTAGGATTTTCAGGCATGGCATTATATTTAGCTGGAATTGCTTATCTGGTTTTGAGAAAGACCAAGGAGATGACTCATCTCCTGGCACTAACAACAGAAGAAAGTGAGCGATTGAGCATCGAGCCGAGCAAGACATCAGCATATAACCTCCCGAGCGAAGAAACAGTAAGCATGCAATTGCCTCAGAGAATTAGAACAACCAATGATGTAAACTGA | 1638 | 43.16 | MAAGGPNSGQPQFFSRAGDESFSHAPLIENTETDQIVVPDKKSWKNLFAYMGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILLASCAALVIQSLAANLGVVTGKHLAEHCKAEYPKVQNFILWILAEIAIVACDIPEVIGTAFALNMLFSIPIWCGVLLTGLSTLLLLALQQYGIRKLEFLIAFLVLTIAICFFLELGYAQPDVGEIFYGLFVPQLKGSGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSIPGIKEACRFYMIESGFALLVAFFINVAVISVSGAVCNSPDLNKEDQMSCSDLDLNEASFLLRNVLGKWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLKLMPWIRNFLTRSLAIVPSLIVAIIGGPSGAGKLIIISSMILSFELPFALIPLLKFTSSETKMGPHVNSLAITILTWIIGFLIMAINIYYLITRFVHVLIHSDLQLAAVIFIGILGFSGMALYLAGIAYLVLRKTKEMTHLLALTTEESERLSIEPSKTSAYNLPSEETVSMQLPQRIRTTNDVN | 545 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 827593 | 832992 | - | CmoCh01G001910.1 | Cmo01g00191 | 373674 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo01g00191 | 545 | Hamap | Divalent metal cation transporter MntH [mntH]. | 32 | 455 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cmo01g00191 | 545 | TIGRFAM | nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family | 46 | 421 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cmo01g00191 | 545 | PANTHER | METAL TRANSPORTER NRAMP1 | 8 | 540 | - | - | |
Cmo01g00191 | 545 | Pfam | Natural resistance-associated macrophage protein | 67 | 429 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cmo01g00191 | 545 | PRINTS | Natural resistance-associated macrophage protein signature | 126 | 152 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cmo01g00191 | 545 | PRINTS | Natural resistance-associated macrophage protein signature | 154 | 173 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cmo01g00191 | 545 | PRINTS | Natural resistance-associated macrophage protein signature | 179 | 200 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cmo01g00191 | 545 | PRINTS | Natural resistance-associated macrophage protein signature | 229 | 252 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cmo01g00191 | 545 | PRINTS | Natural resistance-associated macrophage protein signature | 339 | 358 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cmo01g00191 | 545 | PRINTS | Natural resistance-associated macrophage protein signature | 367 | 384 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cmo01g00191 | 545 | PRINTS | Natural resistance-associated macrophage protein signature | 399 | 418 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cmo01g00191 | 545 | PANTHER | SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER | 8 | 540 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g00191 | Cmo-Chr1:827593 | Cmo04g02499 | Cmo-Chr4:18379971 | 4.62E-168 | dispersed | |
Cmo01g00191 | Cmo-Chr1:827593 | Cmo14g01073 | Cmo-Chr14:5910482 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo01g00191 | K21398 | - | csv:101209649 | 956.051 |