Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g00207 ATGGCCACTGAAACGGTTCACGACTTCATTTTCCGGTCGAAATTGCCGGATATCTACATCCCTAAGCACCTACCTCTGCACTCGTACTGCCTTCAAGAAAAGATGGCAGAGATCGGCCACCGGACCTGTCTAATCAATGCCGTCACTGGTGAATCCTTCACTTATTCCGACGTCGACCTCGCCGCTCGCAAGGCCGCCTCTGGATTGTACAAACTCGGTATTGCAAAAGGCGATGTGATCATGCTTCTCCTCCCGAACTCACCGGAATTCGTCTTCGCTTTCCTCGGCGCATCGTACCTTGGCGCGATTATGACGGCGGCGAATCCTTTCTTCACTGCGGCAGAGATCGCGAAGCAAGCTAAAGGATCGAAGGCGAAATTGATAATCACGCAATCGTCGTATTACGAGAAAGTTAAGGAAATAACAGAGCAATTATCTGATGCTAAAATCATGACCGTCGATTCTCCGTCGCTAGGTTGCTTATCGTTCGCCGATTTAATCCAGGGAGGCGATCATAAGATTCCGGTATCGTTCGCCGATTTAATCCAGGGAGGCGATCATAAGATTCCGGCGGTGGAGATCAGTCCTGACGACGTCGTTGCTCTGCCGTACTCCTCTGGAACCACCGGATTGCCGAAAGGAGTGATGCTAACACATAAAGGATTAGTGACGAGTGTGGCTCAGCAAGTGGATGGAGAAAATCCGAATCTGTACTACAGAAACGACGATGTGATTTTGTGCGTTTTGCCGCTTTTTCATATCTATTCGCTTAATTCGGTTCTGCTCTGCGGGTTGCGCGCCGGTGCGACGATTTTGATCATGCCTAAATTTGAGATCGGTTCGCTTTTGCAATTGGTGGAGAAATACAGAGTTTCAATTGCGCCGATTGTGCCGCCGATTGTTCTCGCCATTGCGAAGTCGCCGGACTTGGAGAAGTACGATTTGTCGTCGATCAGAATGATTAAATCTGGCGGAGCTCCGCTCGGGAAGGAGCTTGAAGATACCGTGAGGGCCAAGTTTCCCAAGGCTGTGCTCGGTCAGGGATATGGAATGACAGAGGCGGGTCCTGTACTAACGATGGGTTTAGCATTTGCGAAGGAGCCATTTCCGATGAAGCCAGGAGCCTGCGGCACCGTCGTGAGAAACGCCGAGATAAAGATCGTCGACACAGAAAACGGCGGCTCGTTACCCCGAAACACGCCGGGAGAGATCTGCATCAGAGGCGACCAAATCATGAAAGGCTATCTCAACAATCCGGAGGCAACCGCCGCCACAATCGATAGCGAAGGCTGGTTGCACACCGGAGATATCGGCTTGATCGACGACGATGACGAACTCTTCATCGTCGATCGGTTGAAGGAACTGATTAAGTACAAGGGATTCCAAGTCGCGCCGGCGGAACTCGAAGCTCTGTTGCTCACTCATCCGGTCATCTCCGATGCCGCCGTCGTTCCAATGAAAGATGAACAAGCTGGAGAGGTTCCCGTTGCGTTCGTAGTGAAATTGAAGAACTCCGAAGTGACTGAGGATGAAATTAAACAATTTATATCAAAACAGGCATATATTAGGAAATTAAATTCGTATATTTCTAAAAATTTTATGACAACGGTGGTTTTCTACAAGAGAATAAACCGGGTTTTTTTCATAGACGCAATTCCGAAATCGCCCTCCGGCAAGATCTTGAGGAAGGAGTTAAGGGCAAAGTTGGCAGCTGATTTTCCAATTCCTACTTAA 1734 49.19 MATETVHDFIFRSKLPDIYIPKHLPLHSYCLQEKMAEIGHRTCLINAVTGESFTYSDVDLAARKAASGLYKLGIAKGDVIMLLLPNSPEFVFAFLGASYLGAIMTAANPFFTAAEIAKQAKGSKAKLIITQSSYYEKVKEITEQLSDAKIMTVDSPSLGCLSFADLIQGGDHKIPVSFADLIQGGDHKIPAVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYYRNDDVILCVLPLFHIYSLNSVLLCGLRAGATILIMPKFEIGSLLQLVEKYRVSIAPIVPPIVLAIAKSPDLEKYDLSSIRMIKSGGAPLGKELEDTVRAKFPKAVLGQGYGMTEAGPVLTMGLAFAKEPFPMKPGACGTVVRNAEIKIVDTENGGSLPRNTPGEICIRGDQIMKGYLNNPEATAATIDSEGWLHTGDIGLIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLTHPVISDAAVVPMKDEQAGEVPVAFVVKLKNSEVTEDEIKQFISKQAYIRKLNSYISKNFMTTVVFYKRINRVFFIDAIPKSPSGKILRKELRAKLAADFPIPT 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 931413 933545 + CmoCh01G002070.1 Cmo01g00207 373690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g00207 577 Pfam AMP-binding enzyme C-terminal domain 467 559 IPR025110 -
Cmo01g00207 577 SUPERFAMILY Acetyl-CoA synthetase-like 14 571 - -
Cmo01g00207 577 Gene3D - 453 572 IPR045851 -
Cmo01g00207 577 CDD 4CL 20 565 - -
Cmo01g00207 577 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 5 571 - -
Cmo01g00207 577 Pfam AMP-binding enzyme 35 458 IPR000873 -
Cmo01g00207 577 ProSitePatterns Putative AMP-binding domain signature. 202 213 IPR020845 -
Cmo01g00207 577 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 571 - -
Cmo01g00207 577 Gene3D - 4 452 IPR042099 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00207 Cmo-Chr1:931413 Cmo08g00565 Cmo-Chr8:3461332 0 dispersed
Cmo01g00207 Cmo-Chr1:931413 Cmo14g01057 Cmo-Chr14:5785268 0 wgd
Cmo01g00207 Cmo-Chr1:931413 Cmo17g00887 Cmo-Chr17:8062887 0 wgd
Cmo01g00207 Cmo-Chr1:931413 Cmo08g00564 Cmo-Chr8:3456378 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g00207 K01904 - csv:101215427 909.442