Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g00276 ATGGCAGCCATGGCTCTTTCATCTACCTTCACTGGAAAGGCTGTTCCTTTGAATGCACCAACCGAGCTGTTTTCCTCGGTTCGCAGCAATGGAAGAGTCTCAATGAGGAAGTCTGGAAAGCCAGCTTCTTCCTCAGGCAGCCCATGGTATGGTCCCGACCGTGTTAAGTACCTCGGACCATTCTCTGGTGAGCCTCCATCTTACTTGACAGGAGAATTCCCTGGTGATTATGGTTGGGACACTGCAGGCCTTTCAGCTGACCCTGAGACCTTTGCTAAGAACCGAGAGCTCGAAGTGATTCACAGTAGATGGGCCATGCTTGGGGCTCTTGGATGTGTATTCCCAGAGCTTCTTTCCAGAAATGGAGTCAAGTTTGGTGAAGCAGTATGGTTCAAGGCTGGTTCCCAAATCTTCAGTGAGGGTGGCCTTGACTATCTTGGAAACCCAAGTCTTGTTCATGCACAGAGCATTTTGGCCATTTGGGCATGTCAAGTAGTGCTTATGGGTGCAGTTGAAGGTTACCGTATTGCAGGAGGACCTCTTGGAGAAATTACTGATCCCATCTACCCAGGTGGCAGCTTTGATCCCCTCGGGCTGGCCGATGATCCAGAGGCATTTGCAGAGCTTAAGGTGAAAGAACTTAAGAACGGTCGTCTCGCAATGTTTTCCATGTTCGGGTACTTTGTGCAGGCCATTGTAACAGGAAAAGGTCCTTTGGAAAACCTCGCAGATCACCTTGCTGATCCTGTCAACAACAATGCATGGGCTTATGCTACCAACTTTGTACCTGGGAAGTGA 798 49.5 MAAMALSSTFTGKAVPLNAPTELFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGYFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1287223 1288020 + CmoCh01G002760.1 Cmo01g00276 373759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g00276 265 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC 2 265 - -
Cmo01g00276 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Cmo01g00276 265 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Cmo01g00276 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Cmo01g00276 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 265 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00276 Cmo-Chr1:1287223 Cmo13g00573 Cmo-Chr13:6475233 2.48E-172 dispersed
Cmo01g00276 Cmo-Chr1:1287223 Cmo14g00978 Cmo-Chr14:5235919 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g00276 K08912 - csv:101203342 519.235