Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo01g00292 | ATGTCGGTGCCTGCGGCTTCCGTCGCTGCAGGTATATTGAAACAGGTTGCTTGCTCGTTTCCAAAACAGTTCATTTTATTGTGGTTTCTGATTCCCGTCACCAATGCCTACGTACCCGATATATCAGCAGCACCTTTGGTTGCACCTGCTATCCACAATATGCCTTTTCCTGCCAAATTGCCTCCTCACCAACACCACCGTGGAAAAAATATGTCACCGCAGAGTGTGTCAGCAGCTGGACTAGCACCAGCATCTCCTCCTTACTATGGGCCTCTTATCACTTCTGGTCACTCACCCACGAGTTCAAGTTTTTCAAAACCATTGATGAAGAGTGGATCGGCTCCTCCTGATGGTAGGCTTGAAAACATTGCTCCCATACAGTCCAGTGCTGGAGCTATTCCCCTTGGATTACCTCAGCCACCACTTTCTCCTAATGCAGCAGCAGACTGTTGCAAACCTGACATGGTGCTGAAACGAGGAAGTGGCAATGACTGCCACTGTGTCTATCCCATAAAAATTGATCTCCTCCTCTTGAATGTATCACAGACTCCTAATTGGAAACTTTTTCTCGAAGAGTTAGCTTCCGAACTAGGTTTACGAGTCTCTCAGATTGAGCTGATAAACTTTTATGTAATTAGTTTATCAAGGTTAAATATCTCAATGGACATCACTCCACATGCTGGGATCAGCTTTTCTGCGGTTGATGCATCGACGATAAACTCTTCACTTACAATGCACAAGGTTCATCTAGACCCTACACTGGTTGGTGATTACAATCTTCTCAATCTCACCTGGTTTAAGCCTCCTCCTCCTTCTCAAGCTCCTACAGCTTCGGCATCACCTGTAGCAGCTCCTGTATATCATTTTCCAGCCTCAACATCTCTGAGTCCTCCTAGTAAAGGACACCATTCGAATCTGACCCTTATTCTTGGGATCGGTGCTGGCTTTTTTTTCATTGCCATTCTATTTGTGTTGATAATTTGTCTATACACATCTCGTCATGGGAAGACTGAAGCACCTCCTTTAGTAGCTGAAAAACCAAGGGTTGAAGACAAAGTGCCTGGGGTAGGATCTTTCCCTCATCCATCAAGTATGAGGTTTCTAACTTACGAGGAGCTTAAAGAAGCAACTAATAACTTCCAAGCAGAAAGCATATTGGGGGAGGGTGGTTTTGGCAGGGTTTTTAAGGGTGTCTTAAGTGACGGCACAGCTGTTGCAATCAAGAGGCTTACAAGTGGAGGGCAACAAGGTGATAAGGAGTTTTTGGTTGAGGTCGAGATGCTTAGTCGGTTGCATCATCGAAATCTTGTTAAACTTGTTGGCTACTACAGTAATCGTGATTCTTCACAGAACCTGCTATGCTATGAACTTGTTCCCAATGGAAGCTTGGAGGCCTGGCTCCATGGGCCTCTAGGTGTTAATTGTCCTTTGGATTGGGACACCAGAATGAAGATCGCGCTTGATGCCGCTCGAGGACTTGCTTACCTTCATGAAGACTCGCAACCGTGTGTTATCCACAGAGACTTTAAGGCATCAAATATACTGCTTGAGAACAACTTCCATGCCAAAGTTGCTGACTTTGGTCTTGCTAAACAAGCTCCGGAAGGCAGAGCTAATTACCTTTCTACTCGTGTGATGGGTACATTTGGGTATGTCGCCCCCGAATATGCAATGACTGGTCATTTACTCGTTAAAAGTGATGTTTATAGCTATGGAGTTGTTCTTCTTGAGTTGCTCACCGGAAGAAAACCTGTCGATATGTCACAAACATCAGGGCAAGAGAACCTTGTCACATGGGCTAGGCCAATTTTGAGAGATAAGGATCGGTTGGAAGAACTTGCTGATCCACGACTCGGAGGAAAGTATCCGATGGAAGATTTCGTGCGGGTGTGTACCATTGCTGCAGCCTGTGTTGCTTCAGAGGCTGGCCAACGCCCAACTATGGGCGAAGTTGTACAGTCTCTTAAAATGGTCCAGCGGACTACAGAATACCAAGACACCGTGGTACCATCCTCCAACAACCAAACCAATGTCAAACAATTCTCCACAACATTCGAGTCCGATGGATCCTCGTCGATGTTCTCTTCTGGTCCTTATTCTGGTTTAAGCGCTTTTGACAATGACAATGTATCTCGGACAGCAATTTTCTCCGAAGATCTCCACGAGGGACGATGA | 2175 | 45.7 | MSVPAASVAAGILKQVACSFPKQFILLWFLIPVTNAYVPDISAAPLVAPAIHNMPFPAKLPPHQHHRGKNMSPQSVSAAGLAPASPPYYGPLITSGHSPTSSSFSKPLMKSGSAPPDGRLENIAPIQSSAGAIPLGLPQPPLSPNAAADCCKPDMVLKRGSGNDCHCVYPIKIDLLLLNVSQTPNWKLFLEELASELGLRVSQIELINFYVISLSRLNISMDITPHAGISFSAVDASTINSSLTMHKVHLDPTLVGDYNLLNLTWFKPPPPSQAPTASASPVAAPVYHFPASTSLSPPSKGHHSNLTLILGIGAGFFFIAILFVLIICLYTSRHGKTEAPPLVAEKPRVEDKVPGVGSFPHPSSMRFLTYEELKEATNNFQAESILGEGGFGRVFKGVLSDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGVNCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQTSGQENLVTWARPILRDKDRLEELADPRLGGKYPMEDFVRVCTIAAACVASEAGQRPTMGEVVQSLKMVQRTTEYQDTVVPSSNNQTNVKQFSTTFESDGSSSMFSSGPYSGLSAFDNDNVSRTAIFSEDLHEGR | 724 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 1389479 | 1394170 | + | CmoCh01G002920.1 | Cmo01g00292 | 373775 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo01g00292 | 724 | ProSiteProfiles | Protein kinase domain profile. | 380 | 658 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo01g00292 | 724 | ProSitePatterns | Protein kinases ATP-binding region signature. | 386 | 408 | IPR017441 | GO:0005524 | |
Cmo01g00292 | 724 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 504 | 516 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo01g00292 | 724 | CDD | STKc_IRAK | 386 | 656 | - | - | |
Cmo01g00292 | 724 | Pfam | Protein kinase domain | 381 | 653 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo01g00292 | 724 | Gene3D | Transferase(Phosphotransferase) domain 1 | 458 | 682 | - | - | |
Cmo01g00292 | 724 | PANTHER | OS01G0750732 PROTEIN | 43 | 724 | - | - | |
Cmo01g00292 | 724 | MobiDBLite | consensus disorder prediction | 58 | 79 | - | - | |
Cmo01g00292 | 724 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 | 43 | 724 | - | - | |
Cmo01g00292 | 724 | SUPERFAMILY | Protein kinase-like (PK-like) | 355 | 657 | IPR011009 | - | |
Cmo01g00292 | 724 | Gene3D | Phosphorylase Kinase; domain 1 | 361 | 457 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo01g00292 | Cmo14g00961 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g00292 | Cmo-Chr1:1389479 | Cmo19g00148 | Cmo-Chr19:815151 | 2.94E-130 | dispersed | |
Cmo04g00522 | Cmo-Chr4:2593644 | Cmo01g00292 | Cmo-Chr1:1389479 | 1.44E-75 | dispersed | |
Cmo16g00169 | Cmo-Chr16:769031 | Cmo01g00292 | Cmo-Chr1:1389479 | 1.36E-84 | dispersed | |
Cmo17g00572 | Cmo-Chr17:5867772 | Cmo01g00292 | Cmo-Chr1:1389479 | 8.52E-91 | dispersed | |
Cmo01g00292 | Cmo-Chr1:1389479 | Cmo14g00961 | Cmo-Chr14:5121609 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74021 | PF00069 | Pkinase | 2.50E-44 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo01g00292 | - | - | csv:101219278 | 1226.85 |