Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo01g00406 | ATGGCATATGATACTCTCTCTTTCTACTGGCTTACCCCTAGAAGAATCAGGAAGAGGATGGCCGAGCAAGGCGTTTATGGCCCCGACCCACGACCCTTCACTGGAAACATCCTCGATGTCGTAGAGCTTGTGAAGAAATCCACAGCTAACGACATGAGCTCCATCAGTCATGACATCGTTGATCGTTTGTTACCCTATTACTCTACATGGACAAAGCAATACGGAAAGAGGTTTATATATTGGAACGGGATGGATTCGAGGCTGTGTTTGACGGAGATGGAGTTGGTGAAGGAAGTATTGGGGAAGGGCAGCAATGTGTGTGGGAGGTCATGGATGCAAAGACAAGGGACCAAACACTTCATAGGGAAGGGATTGTTGATGGCAAATGGAGAAGCTTGGCATCATCAACGTCACCTGATTTCACCTGCGTTTAGAGGGGAAAGGCTCAAGAGCTACGCGGGGTTGATGGTGGAATGCACCAACAAGATGATCCAATCCTTGGAGGCCCAATTGGAGGAGGGCCAGACAGTGTTCGAAATTTCTGATTGCATGAAACGCCTCACCGCCGACATCATTTCCCGGACTGCGTTCGACACAAGCTCCGACAAAGGCATCCAAATCTTTGATATGCTCACTCAGCTTCAACACCTCTGCGCACAAGCCAGCCGCCACCTCTGCATCCCCGGTAGTCGGTTTTTTCCGAGTAAATACAACAGAAAAATAAAGGCACTAAAAATGGAGATGGAGAGGATGTTAATGGAGATCATTGGAAGCAGAAAAGAGGGCGTGGAGATAGGAAGAAGCAGTGGATATGGAAGCGATTTGTTGGGAATGCTATTGAAGGAGATGCAGAGAAAGAGAGACGATGGATTCAGCTTAGACTTGCAGCTCGTAATGGATGAATGCAAAACTTTCTTCTTTGCTGGCCATGATACCACTTCTCTTTTGCTCAGCTGGACCTTCATGTTGCTCGCTACTAACCCTTCTTGGCAACAAAAGGCTCGTGCTGAAGTCGCCCAAGTTTGCAACGGCCGACTTCCCTCGGTCGAACTTCTCCCTAAGCTCACTTTGCTGAACATGGTGATAAACGAGTCCCTAAGGCTTTACCCACCGGCCACGGTGCTACCGAGAATAGCGTTCGAGGACATAAAGATAAGAGATTTAGAGATCCCGAAAGGGCTATCAGTATGGATACCAGTGCTTGCAATTCATCACAGCGAGGAGCTGTGGGGAAAAGACGCAAACGAGTTCAACCCAGAGAGGTTTGAGTCGAAAGCATTCAGTGGCGGGCGGTTCATTCCATTTTCCAGCGGACCAAGGACCTGCATCGGCCAGGGGTTCGCGTTGATGGAAGCTAAGATCATATTGGCTATGTTACTCTCCAAGTTCAGCTTCACTATTTCCGACACTTATCGCCATGCTCCTGTTGTTGTTCTCACCATACAGCCTAAGTATGGAATTCAAGTTTGCCTCACTCCATTGCCTTCTTGA | 1491 | 48.36 | MAYDTLSFYWLTPRRIRKRMAEQGVYGPDPRPFTGNILDVVELVKKSTANDMSSISHDIVDRLLPYYSTWTKQYGKRFIYWNGMDSRLCLTEMELVKEVLGKGSNVCGRSWMQRQGTKHFIGKGLLMANGEAWHHQRHLISPAFRGERLKSYAGLMVECTNKMIQSLEAQLEEGQTVFEISDCMKRLTADIISRTAFDTSSDKGIQIFDMLTQLQHLCAQASRHLCIPGSRFFPSKYNRKIKALKMEMERMLMEIIGSRKEGVEIGRSSGYGSDLLGMLLKEMQRKRDDGFSLDLQLVMDECKTFFFAGHDTTSLLLSWTFMLLATNPSWQQKARAEVAQVCNGRLPSVELLPKLTLLNMVINESLRLYPPATVLPRIAFEDIKIRDLEIPKGLSVWIPVLAIHHSEELWGKDANEFNPERFESKAFSGGRFIPFSSGPRTCIGQGFALMEAKIILAMLLSKFSFTISDTYRHAPVVVLTIQPKYGIQVCLTPLPS | 496 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 1982694 | 1986161 | - | CmoCh01G004060.1 | Cmo01g00406 | 373889 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo01g00406 | 496 | Gene3D | Cytochrome P450 | 9 | 494 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g00406 | 496 | PRINTS | E-class P450 group I signature | 71 | 90 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g00406 | 496 | PRINTS | E-class P450 group I signature | 317 | 343 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g00406 | 496 | PRINTS | E-class P450 group I signature | 400 | 424 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g00406 | 496 | PRINTS | E-class P450 group I signature | 432 | 442 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g00406 | 496 | PRINTS | E-class P450 group I signature | 297 | 314 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g00406 | 496 | PRINTS | E-class P450 group I signature | 442 | 465 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g00406 | 496 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 2 | 490 | - | - | |
Cmo01g00406 | 496 | SUPERFAMILY | Cytochrome P450 | 58 | 493 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g00406 | 496 | Pfam | Cytochrome P450 | 67 | 470 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g00406 | 496 | PRINTS | P450 superfamily signature | 433 | 442 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g00406 | 496 | PRINTS | P450 superfamily signature | 442 | 453 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g00406 | 496 | PRINTS | P450 superfamily signature | 308 | 325 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g00406 | 496 | PRINTS | P450 superfamily signature | 360 | 371 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g00406 | 496 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 435 | 444 | IPR017972 | GO:0005506|GO:0016705 | |
Cmo01g00406 | 496 | PANTHER | CYTOCHROME P450 FAMILY PROTEIN | 2 | 490 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g00406 | Cmo-Chr1:1982694 | Cmo15g00197 | Cmo-Chr15:906216 | 0 | dispersed | |
Cmo17g00084 | Cmo-Chr17:446404 | Cmo01g00406 | Cmo-Chr1:1982694 | 2.28E-108 | dispersed | |
Cmo01g00406 | Cmo-Chr1:1982694 | Cmo14g00824 | Cmo-Chr14:4261945 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo01g00406 | K10717 | - | csv:101213604 | 816.609 |