Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g00416 ATGGCGGCTACGGCTGACCGGCTCCGCCCTGTCGTGACGTTTGCCGGCCAGGGGATTCGGTTTGATCAGGATTCGGCGGAGACTCCCCCTCTGCTCTCTAGGATGTTGTCTTATCCGATTGGGATTATTCACCACCAGTTGAGCCGCCGTCTCGGTGCCGGGAAGCCACAACCACCGCGGCGTCAGCAGTCTTTTAGTCGAGATTTTGGTCATGCTGCTGCGGAGACCGTTCTTGTTACTCGGTTGAGCTTCACTCTCCTTCGATCTCTTGGGGTAGGGTACCGGTGGATCGTAAGGTTAACTGCACTTGCAGTGTATGCCATTCTTCTTATGCCCGGTTTTCTTCAAGTTATGTATGATTATTTCTTCTCAAGTCAGATTCGGAGGAATATTATTTATGGAAATCAACCAAGAAATTGCTTGGATTTGTATTTACCTACAAATACTGATGAAAAAAAGCCAGTTGTGATATTTGTTAGTGGCGGAGCTTGGATTATTGGGAATAAAGCATGGGGAGCTCTTTTAGGAATGCAGTTGGCAGAGAGAGATGTCATTGTAGCCTCAATTGACTATAGAAATTTCCCTCAGGGTACCATTAGTGACATGGTGACAGATGTTTCTCAAGGGATCTCATTTGTCTGCAAGAATATAGCAGACTATGGAGGAGATCCGGACAGAATCTTTCTAATGGGACAATCAGCTGGTGCACATATTTCCGTTTGTGCCCTCTTGGAGCAAGCAATCAAAGAAGCTGGAAAAGGAGAGAGCGTAGATTGGAGTGTTTCCCAAATGAAAGCTTATTTTGGTTTATCTGGAGGTTATAACTTGTCAAAACTAGTTGAGCACTTCGATAGTCGGGGTCTATATCGTTCTCTCTTTTTGAGCATAATGGAAGGTGAAGAATCTTTGGCCCAATTTTCCCCTGAAATAAGAATCCAAGATCCTAGCATCAGAGATGCTGTATCCAGCTTACCTCCTTTCGTTCTTTTTCATGGTACTGGTGATTACTCAATCCCATCGGATGCCAGTAAAACTTTTGTGGAGACACTCCGAAATGTAGGGGCACAAGCTAACTTATTTCTCTACGAGGGAAAAACTCATACAGATTTGTTCCTTCAGGATCCTTTTCGGGGAGGCAGTTATGAACTTTTTGATCAACTAGTTGCCATATTACATGCCGGCGACGAGGAAGCTCTTGCAAAGGATTCCATGGCACCGCCAAAACCGCGTCTTGTTCCAGAGATTTTGATAAGATTGGCACGAATGGTTAGCCCTTTCTGA 1281 45.2 MAATADRLRPVVTFAGQGIRFDQDSAETPPLLSRMLSYPIGIIHHQLSRRLGAGKPQPPRRQQSFSRDFGHAAAETVLVTRLSFTLLRSLGVGYRWIVRLTALAVYAILLMPGFLQVMYDYFFSSQIRRNIIYGNQPRNCLDLYLPTNTDEKKPVVIFVSGGAWIIGNKAWGALLGMQLAERDVIVASIDYRNFPQGTISDMVTDVSQGISFVCKNIADYGGDPDRIFLMGQSAGAHISVCALLEQAIKEAGKGESVDWSVSQMKAYFGLSGGYNLSKLVEHFDSRGLYRSLFLSIMEGEESLAQFSPEIRIQDPSIRDAVSSLPPFVLFHGTGDYSIPSDASKTFVETLRNVGAQANLFLYEGKTHTDLFLQDPFRGGSYELFDQLVAILHAGDEEALAKDSMAPPKPRLVPEILIRLARMVSPF 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2024634 2029998 + CmoCh01G004160.1 Cmo01g00416 373899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g00416 426 Pfam BD-FAE 141 350 - -
Cmo01g00416 426 Gene3D alpha/beta hydrolase 122 374 IPR029058 -
Cmo01g00416 426 PANTHER ARYLACETAMIDE DEACETYLASE 43 400 - -
Cmo01g00416 426 SUPERFAMILY alpha/beta-Hydrolases 105 377 IPR029058 -
Cmo01g00416 426 PANTHER ISOPRENYLCYSTEINE ALPHA-CARBONYL METHYLESTERASE ICMEL2-RELATED 43 400 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00416 Cmo-Chr1:2024634 Cmo07g00847 Cmo-Chr7:4007882 5.37E-07 dispersed
Cmo04g01620 Cmo-Chr4:8262141 Cmo01g00416 Cmo-Chr1:2024634 9.54E-177 transposed
Cmo04g02121 Cmo-Chr4:13882159 Cmo01g00416 Cmo-Chr1:2024634 1.27E-110 transposed
Cmo01g00416 Cmo-Chr1:2024634 Cmo14g00816 Cmo-Chr14:4209431 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g00416 K15889 - csv:101206540 625.935