Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g00445 ATGATTCGGCTGCATTTCTGCGAGTTTCAAAAAGAACTCAACGACACAGATGACAGAGTGTTCTTGATTTATATCGCAAACACGATTGCTGAAACGGGCGCCGACGTGTTTCGTTGGGCCGGCGGGAAAGACATTCCATATTACAGAGATTACGCTGTGAATATGCCTCATAACAATGGCGAAAAGAAAGTGAGTCTGTCCGTGAAGCTTCAAGCAAACCCAGATAACTCGAGAACGAGATTCAATAACGTGATCTTGAATGGTATAGAAATCTTCAAATTAAATGATTCGAGCGGCAACCTCGCCGGCCAAAACCCAGATCCACCGCCCACTCTGCCTCTTCTACCGCCCACCCCACAATCAAGGAAATCAGATAGAAAAATGGTGGGTGTTCTAATCCCTGCAGTGGTTGGAGGTGTGACTGCCACATTAGCTCTGGGATTGTTTGTTTTCTGTCGACGCAGAACATTTTCCGACCAGACCTCGAGCGACGGTACTTCCTGGTGGGCTCCGTATTCCATATCAACAAACAAATCAAGTAAGACTCGCAACTCAAATCTCCCATCTGATTTATGTCGTTACTTTTCGTTGGCGGAGATTAAATCCGCCACCAAAAACTTTGATGACATTTTCATCATCGGCGTCGGCGGATTCGGTAACGTCTACAAAGGATACGTCGACGACGGAGCCACCCTAGTGGCAATCAAACGGTTGAAGCCTGGTTCTAAACAAGGAGCACACGAGTTCAAAACAGAGATCGAGACGCTCTCACAACTTCGTCATCTCCATCTCGTCTCACTAATTGGGTATTGCAATGAGGGCAACGAAATGATTCTAGTCTACGATTATATGTCTCATGGTACCCTTCGTAGTCACCTCTACGGCGACGACGAACAACCTCTCACATGGAACCAGCGCCTCCAGACCTGTATCGGATCTGCCAGAGGACTACACTACCTTCATACTGGTGCCGAACACACCATCATCCACCGCGATGTGAAAACCACAAATATCTTACTGGACGACAAATGGGTTGCTAAGGTTTCTGATTTTGGATTGTCCAAAATCGGGCCAACCAACATGTCCAACGCACACATTAGCACAGTAGTCAAAGGTAGCTTCGGTTATCTCGACCCAGAGTATTGCCGACGACGACAACTCTCAGAAAAGTCCGATGTATATTCATTTGGGGTGGTTCTCTGCGAAGTACTCTGCGCTCGCACACCAATTATTCATACAGTCGCCAATACTCGAGTTCTATTGACAGAATGGGTAAAACAATGCATTCATGAGAAGAAAATTACAGAAATGGTAGACCCAATTCTTCGAAACCAAATTGGAACAGAGTGCTTCAGTAAATTCGTTCAAGTTATGGTGAGTTGCATTCAAGATGAGGGAAACAAGCGACCATCGATGAACGATGTGGTACGAGGCCTAGAGTATGCATATCAACTACAAGAGAGTTCTAAGGAGGATAATGTTGAACTGAGTAGCCTCGACAACGAAGATGGTTGGCTCTTGAGGGAGGGGATGTCTAGTAACACTAGTATAGAAATGAATGAGAACTCAAGTAATGTGTATAATAATGGGATGTCAGGGATTGTTTCGAGCCTACAAGCAAGATAA 1626 45.45 MIRLHFCEFQKELNDTDDRVFLIYIANTIAETGADVFRWAGGKDIPYYRDYAVNMPHNNGEKKVSLSVKLQANPDNSRTRFNNVILNGIEIFKLNDSSGNLAGQNPDPPPTLPLLPPTPQSRKSDRKMVGVLIPAVVGGVTATLALGLFVFCRRRTFSDQTSSDGTSWWAPYSISTNKSSKTRNSNLPSDLCRYFSLAEIKSATKNFDDIFIIGVGGFGNVYKGYVDDGATLVAIKRLKPGSKQGAHEFKTEIETLSQLRHLHLVSLIGYCNEGNEMILVYDYMSHGTLRSHLYGDDEQPLTWNQRLQTCIGSARGLHYLHTGAEHTIIHRDVKTTNILLDDKWVAKVSDFGLSKIGPTNMSNAHISTVVKGSFGYLDPEYCRRRQLSEKSDVYSFGVVLCEVLCARTPIIHTVANTRVLLTEWVKQCIHEKKITEMVDPILRNQIGTECFSKFVQVMVSCIQDEGNKRPSMNDVVRGLEYAYQLQESSKEDNVELSSLDNEDGWLLREGMSSNTSIEMNENSSNVYNNGMSGIVSSLQAR 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2150671 2152296 - CmoCh01G004450.1 Cmo01g00445 373928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g00445 541 SUPERFAMILY Protein kinase-like (PK-like) 180 480 IPR011009 -
Cmo01g00445 541 Gene3D Transferase(Phosphotransferase) domain 1 284 504 - -
Cmo01g00445 541 Pfam Malectin-like domain 1 93 IPR024788 -
Cmo01g00445 541 CDD STKc_IRAK 213 480 - -
Cmo01g00445 541 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 2 492 - -
Cmo01g00445 541 ProSitePatterns Protein kinases ATP-binding region signature. 213 236 IPR017441 GO:0005524
Cmo01g00445 541 Gene3D Phosphorylase Kinase; domain 1 170 283 - -
Cmo01g00445 541 PANTHER OS07G0166700 PROTEIN 2 492 IPR045272 GO:0004714|GO:0006468
Cmo01g00445 541 ProSiteProfiles Protein kinase domain profile. 207 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo01g00445 541 ProSitePatterns Serine/Threonine protein kinases active-site signature. 328 340 IPR008271 GO:0004672|GO:0006468
Cmo01g00445 541 Pfam Protein tyrosine and serine/threonine kinase 213 478 IPR001245 GO:0004672|GO:0006468
Cmo01g00445 541 Gene3D - 1 95 - -
Cmo01g00445 541 SMART serkin_6 207 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo01g00445 541 MobiDBLite consensus disorder prediction 99 123 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g00445 Cmo14g01188 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00445 Cmo-Chr1:2150671 Cmo14g01188 Cmo-Chr14:9999069 0 dispersed
Cmo01g00445 Cmo-Chr1:2150671 Cmo01g00446 Cmo-Chr1:2152778 0 tandem
Cmo01g00445 Cmo-Chr1:2150671 Cmo14g01187 Cmo-Chr14:9966053 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74023 PF07714 PK_Tyr_Ser-Thr 7.80E-52 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g00445 - - cmos:111452360 1066.6