Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g00449 ATGAGCTTGATTGTTTCGGCTGTTTTCCTTTTTGTCATATTTTCTCTTGGAGCTGCATACGATCCGTTGGATCCGAATGGGAACATTACGGTCAAATGGGACGTCATGTCTTGGACGCCTGATGGCTATGTGGCGGTTGTGACATTGAACAACTTCCAAATGTACCGGCATATAATGAGTCCCGGGTGGACGATGGGATGGACGTGGGCAAAAAAGGAAGTGATATGGTCGATGGTCGGGTCGCAAACGACCGAGCAAGGTGATTGCTCCAAGTTCAAAGGAAACATTCCTCACTGTTGTAAGAAAACCCCCACTGTTGTGGATTTGATGCCAGGAGTTCCTTACAATCAGCAGTTTACAAACTGCTGCAAAGGTGGGGTTGTGGCTGCTTGGGGACAAGACCCTCAAGCTGCTGTTTCAGCCTTTCAGATCAGTGTTGGCCAAGCAGGTACTTCAAATAAGACTGTCAAACTCCCCAAGAACTTCACTCTGCTTGGTCCCGGCCCCGGGTACACTTGTGGCCCCGCCAAGGTCGTGCCTTCCACCACCTTCCTCACACCCGACCGCCGTCGCAAAACTCAAGCTCTGATGACTTGGAATGTGACCTGCACTTACTCTCAGTTTTTGGCCAGAAAAAATCCTAATTGTTGTGTTTCGTTCTCATCGTTCTACAACGATACGATCACGTCTTGTCCGTCTTGCACCTGTGGTTGCCAAAACAAGAACAGCTGCATCAAGAGTGATTCTAAGATTCTTAAGCTGGTTGGAATCAATACACCAAAGAAAGACAACACCCCGTTGCTACAGTGCACGCATCATATGTGCCCGGTTCGAGTTCACTGGCACGTGAAACAAAATTATAAGGAATACTGGCGGGTGAAGATCGCCATCACAAACTTCAACTACCGAATGAACTATTCGCTTTGGTCTCTCGTCGTCCAGCATCCAAATCTGAACAATGTAACCCAAGTTTTCAGCTTCAACTACAAACCCCTTGTTCCCTATGAATCAATCAATGACACGGGAATGTTCTACGGGACGAAGTTTTACAACGACCTTCTGATGGAAGCAGGGCCATTTGGGAATGTACAATCAGAGGTGTTGCTGCAAAAGGATCAGAACACCTTCACCTTTAAGCAGGGATGGGCATTCCCTCGGAAAGTTTACTTCAATGGCGACGAGTGCATGCTTCCACCACCGGACACATACCCGTTCCTGCCGAACACTGCCCGCCAAAGGCCCATTGCCCTCTCAACATCATTTGCTTTGCTGCTGCTCTTCCTGCTGCTAGCTATTTGCTGA 1302 48.31 MSLIVSAVFLFVIFSLGAAYDPLDPNGNITVKWDVMSWTPDGYVAVVTLNNFQMYRHIMSPGWTMGWTWAKKEVIWSMVGSQTTEQGDCSKFKGNIPHCCKKTPTVVDLMPGVPYNQQFTNCCKGGVVAAWGQDPQAAVSAFQISVGQAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTTFLTPDRRRKTQALMTWNVTCTYSQFLARKNPNCCVSFSSFYNDTITSCPSCTCGCQNKNSCIKSDSKILKLVGINTPKKDNTPLLQCTHHMCPVRVHWHVKQNYKEYWRVKIAITNFNYRMNYSLWSLVVQHPNLNNVTQVFSFNYKPLVPYESINDTGMFYGTKFYNDLLMEAGPFGNVQSEVLLQKDQNTFTFKQGWAFPRKVYFNGDECMLPPPDTYPFLPNTARQRPIALSTSFALLLLFLLLAIC 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2164388 2166447 - CmoCh01G004490.1 Cmo01g00449 373932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g00449 433 PIRSF COBRA 1 433 IPR006918 GO:0010215|GO:0031225
Cmo01g00449 433 PANTHER PROTEIN COBRA 3 429 IPR006918 GO:0010215|GO:0031225
Cmo01g00449 433 PANTHER COBRA-LIKE PROTEIN 3 429 - -
Cmo01g00449 433 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0031225
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g00449 Cmo14g01186 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00449 Cmo-Chr1:2164388 Cmo11g00223 Cmo-Chr11:1109123 0 dispersed
Cmo01g00448 Cmo-Chr1:2161265 Cmo01g00449 Cmo-Chr1:2164388 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g00449 - - csv:101217724 856.67