Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g00475 ATGTCGACTGTTGATTCTTCACGGGAGGAAAATGTTTACTTGGCCAAGTTGGCCGAACAGGCCGAACGGTATGAGGAAATGGTAGAGTTCATGGAGAAAGTTGCCAAAACTGTGGATGTGGAGGAGCTGACTGTTGAGGAGAGGAATCTTCTCTCTGTTGCTTACAAGAATGTCATTGGGGCTCGGAGGGCCTCTTGGAGGATAATATCTTCCATTGAGCAGAAGGAAGAAAGTCGTGGAAATGAGGACCATGTTGCAGTTATCAAGGAGTACCGTAGCAAAATTGAAACTGAATTGAGCAAGATCTGTGATGGGATTTTGAGCCTACTCGAGTCTCATCTCATCCCATCAGCCTCATCTGCCGAGTCGAAGGTGTTTTATCTCAAAATGAAAGGTGACTACCACAGGTATCTGGCTGAGTTCAAGACTGGAGCTGAAAGGAAAGAAGCAGCTGAGAGCACATTATTAGCTTACAAGTCTGCTCAGGATATTGCTCTTGCTGAATTGGCTCCTACACATCCAATTAGGCTAGGTCTTGCTCTTAACTTCTCAGTGTTTTATTATGAGATCCTCAATTCGCCAGACCGCGCTTGCAATTTAGCAAAGCAGGCTTTTGACGAAGCGATTTCTGAGCTTGACACATTGGGTGAAGAATCATACAAGGATAGCACCTTAATCATGCAACTTCTCCGAGACAACTTGACCCTTTGGACCTCTGATGTTGGGGATGAAGCCGGCGATGAAATTAAGGAAGCATCAAAACGTGAATCAGGAGAGGGACATGGACAGTAG 792 45.45 MSTVDSSREENVYLAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAVIKEYRSKIETELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDVGDEAGDEIKEASKRESGEGHGQ 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2267892 2270489 + CmoCh01G004750.1 Cmo01g00475 373958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g00475 263 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Cmo01g00475 263 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Cmo01g00475 263 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Cmo01g00475 263 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Cmo01g00475 263 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Cmo01g00475 263 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Cmo01g00475 263 PANTHER 14-3-3-LIKE PROTEIN GF14-F 5 257 - -
Cmo01g00475 263 Coils Coil 14 34 - -
Cmo01g00475 263 Pfam 14-3-3 protein 14 238 IPR023410 -
Cmo01g00475 263 PANTHER 14-3-3 PROTEIN 5 257 IPR000308 -
Cmo01g00475 263 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Cmo01g00475 263 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Cmo01g00475 263 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Cmo01g00475 263 SMART 1433_4 8 251 IPR023410 -
Cmo01g00475 263 PIRSF 14-3-3 2 250 IPR000308 -
Cmo01g00475 263 Gene3D - 1 251 IPR036815 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00475 Cmo-Chr1:2267892 Cmo12g00129 Cmo-Chr12:795393 1.38E-162 dispersed
Cmo19g01060 Cmo-Chr19:9198427 Cmo01g00475 Cmo-Chr1:2267892 2.37E-125 dispersed
Cmo01g00475 Cmo-Chr1:2267892 Cmo14g01165 Cmo-Chr14:9444790 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g00475 K06630 - csv:101222068 500.36