Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g00568 ATGGCCGCCGCTGCCGTGGATCCTTCGTCGCTGCAATTCACGCCGACTTGGGCCGTTGCTGCCGTCTGCTTCATCTTTATCTCTCTCTCTCTGTTCCTCGAGCATTTGATTCATCTCCTCTCCAATTGGCTGAAGCGGAAGAGGAAAACGGCATTATTCGATGCGGTTGAGAAGCTAAAATCAGTTCTGATGCTGCTAGGGTTCATGTCGCTAACACTGACGGTAACGCAACAGCCGGTATCGAAGATTTGTATTCCGAATAGCGTAGCGTATACGATGCTTCCATGCCAGAGAGAGATACAGATCAAAGCAGATAAGAATTTGGAGATGGAACAATCACGATCAGCCTCCTCTGCAAATCGGTCGTTTTCATGGATGATGGAAAAATTCGTGAGCCTCGCAGCAGAAAGTGAAGATAGTGGTGGTGGTGATGATTCTTCTTCTTCATCATCATCTTCTTCATCTTCGGATTACTGTACTGCGAAGGGGAAGACCTCGCTGATATCGCAAGGAGGAATGAATCAACTGAACAACTTCATCTTCGTGTTGGCTGTTATGCAGATTGTTTACAGCGTCCTCACCATGGCTTTGGGAAAGGCCAAGATGAGGCGTTGGAAAGCTTGGGAGGAAGAAACTCATACCTTGGATTATCAAGTGGCCAATGATCCAAATCGGTTTAGATTTACAAGGCAAACAACGTTTGGACGTCGACATATTAGTTCTTGTGCATCACCACCATTACTTCTTTGGACGAAATGTTTCTTTAGACAATTCTTTCGTTCGGTTGCCAAAGTTGATTACCTAACCCTTCGTCATGGTTTCATATCGACTCACATACGTGGAAACACTTCTTTCAACTTCCAAAAGTACATTGAAAGATCGTTGCATGATGACTTCAAAGTGGTCGTTGGCATGAGTCCTTTCATGTGGCTCATAGTAGTTATCTTCATTCTCGTAGACGTGCATGGTTGGAATGCTTATCTGTGGGTGTCTTTTCTTCCACTAATTATAGTGCTAGCTCTTGGAACAAAGCTGGAAGTAATCGTAGCAAGGCTTGCCCTTGAGCTTCAACACAAGACCGATGTGATCAAAGGAGCCCCAATGGTTGAACCAAGTGATGATCTCTTCTGGTTCAATCACCCCAAATTTGTTCTTACCCTCCTTCATTTCACCTTGTTTATGAATGCATTCGAGCTTTCTTTTATCATTTGGGTCACGCTACAATATGGGATTAATTCTTGCTACCATGAAAAGTTGGTGATCATCATTATAAGAATAGTCTTGGCGGTCACAGTCCAAATATTGTGCAGCTACAGTACTCTACCTCTCTATGCTCTTGTCACACAGATGGGGTCACAGTTTAAAGCTGCAGCATTAGAAGAACATACCGCCAAAGCCATAAAGAAATGGCACCAAGATGTGAAGCAAAAGAGAAAACAGAGTAACCATCACCAGTACCTCAACGACCTGGACCCAAGCCAACACCAAGAGGGATCGTCTCCCTTCGTCGCTGGACGCTTGTCGTCGATGGTTTCCGAGAGCAGCAACAAAACCCAAAGCTCCCAAGAGTTGACCCCTTTCCATCACCGAGCTCCCACTTTTTCTGAGCTCAATTATCTTGACATTGAATCTAATGAGATTGTTGAAGAACTCACAGAAACTACGTGTACTAATCGAATACCTGTTTCTGTTTCAAAAACCCTAAATCGGATCTCAAATTCAGACCTGATACGGATGGAAGCTGCCGGAAATGGCGGAAGAGCCGAGGGCTCTTCTTCTCCGAAGCCCTTGAAGTTCTCGGCGTACCAGAACCCGGCCTTATCCGCCGCTTTAACTGTCAATAGCATCCAACCTTCCAAGTTCACCTTCCTCTGCATCTTCTCCCTCTCCTCTGCATCTGCATTTGCCTTCCTTCGCGTTGTTTCCTGGGAGAATGCGATTATCGACAGCTTGAAGGTGAAAAACATTCCTGAAGAGGCGGCCTATGTTTCTGCCAAGGCTGTACAGACAGTGGTAGGCTTAGTGTTTTTGGGAACAGTATTAGCTTTCTTCAAAGCAATATTCTTGTATAGAAGAAGATTTAGTGGTGGTGTGTCTGTTGTATCTGCCTCTAATGGTTCCAAGGATCAAACACCTCTTTCCAAGCGTCAGCTAGGGCTTATGGGATTAAAACCAAAGGTTGAGAATGGGACATCTGAAAAGGCATTAAAACCTCCAAAATCTAAACCCTACTCATCACCTCCTTCTTCTGATGTTCTTGTTCCTCTTCATCAATCTATGGGCAGTTTTGGTTATTCATCTCAAAGAAACACAGATAAATCGAACTCTGTCGGTGGAAGTAAAATGCAGTCTTTCACATCACCTGCAAAGTCCCCTGGTTCTGATTCTTCGTTTTATCTTGTCTCTGGAGTGGCCTCACCATTGCCTTCTGCCCTGAGTTCGTCGGGACGGGATTCTGTGGTTTGTACCTCATGGTCAAGCAAGCGAGTATCCTCTCTGAAAGAAATTACGTCTGAAGAAGAATTTGAACGATTTCTTACTGAAGTAGATGAAAAGTTAACTGAGTCTGCAGGAAAATTAGCTACTCCACCCCCCACCATCAGCAGTGTTGGTTTAACCAGTCCCAGTACTGTTGATACTTCAGCTAATACCTCTGGAACTACCAGAAGTACTCCCTTGAGGCCTGTAAGAATGTCTCCAAGTTCACAGAAATTCAAAACTCCTCCTAAGAAAGGAGAGGGTGACCCTCCCTCCCCAATGTCTATGGAGGAAATGGTTGAAGCTTTCAAGCATTTGGGAGTATATCCCCAAATCGAGGAATGGCGTGATCGTCTTAGGCAATGGTTTTCTTCTATTCTGCTTAATCCTCTTGTAGAAAAGATTGAAACCAGTCATGTTCAGGTAAAGGAAGTGGCTGCTAAACTCGGTATCTCAATTACAGTAAGTCCAGTAGGCGATTCCTCTGGAACCCTTCCTACTGTGTCTTCGGTTGACAGGACTAATGAATGGCAACCAACATTGGCCATTGATGAAGATGGACTTCTCCACCAGTTACGAGCAACGCTTGTGCAATCCATAGATGCTTCTAAAATTAAGATGCCTCTAGTGAATATACAACGGTCTCCTCAGCAGAATCCCTCGGTTCCCATCATGCAAGAGTGTGTTGATGCCATTGTAGACCACCAGAAACTTCTTGCTTTGATGAAGGGTGAATTGGTCAAGGGCTTGCTGCCTCAAAGTAGCATTCGAGCAGATTATACAGTACAAAGAATCAAAGAGCTTTCTGAAGGATCCTGCTTGAAAAATTACGAGTATCTTGTGACTGGAGAGGTATATGATAAGAAGAACAAGAAATGGACACTTGACCTTCCAACCGATTCTCACTTACTCTTGTATTTATTCTGTGCTTTCCTTGAGCATCCGAAGTGGATGCTACATCTAGATCCTTCAACCTATGCCGGAGCTCAGTCCAGTAAAAATCCTTTGTTCTTGGGGGTTCTTCCTCCAAAAGAACGGTTTCCCGAGAAGTACATAGCCATAATATATGGTGCTCCTTCCATTATTCACCCTGGAGCTTGCATACTGGCTGTTGGGAGGAAAAGTCCCCCAGTTTTCTCTTTGTATTGGGATAAGAAGCTTCAGTTTTCCCTTCAGGGAAGAACAGCATTGTGGGATGCCATATTACTCCTGTGTCACAGAGTCAAGGTCGGATACGACGGAATCATTCGAGGTATGCACCTTGGTTCTTCGGCACTAAGAGTTCATCCGGTTCTGAATTCAGAGCCTGTAGACTGA 3795 44.58 MAAAAVDPSSLQFTPTWAVAAVCFIFISLSLFLEHLIHLLSNWLKRKRKTALFDAVEKLKSVLMLLGFMSLTLTVTQQPVSKICIPNSVAYTMLPCQREIQIKADKNLEMEQSRSASSANRSFSWMMEKFVSLAAESEDSGGGDDSSSSSSSSSSSDYCTAKGKTSLISQGGMNQLNNFIFVLAVMQIVYSVLTMALGKAKMRRWKAWEEETHTLDYQVANDPNRFRFTRQTTFGRRHISSCASPPLLLWTKCFFRQFFRSVAKVDYLTLRHGFISTHIRGNTSFNFQKYIERSLHDDFKVVVGMSPFMWLIVVIFILVDVHGWNAYLWVSFLPLIIVLALGTKLEVIVARLALELQHKTDVIKGAPMVEPSDDLFWFNHPKFVLTLLHFTLFMNAFELSFIIWVTLQYGINSCYHEKLVIIIIRIVLAVTVQILCSYSTLPLYALVTQMGSQFKAAALEEHTAKAIKKWHQDVKQKRKQSNHHQYLNDLDPSQHQEGSSPFVAGRLSSMVSESSNKTQSSQELTPFHHRAPTFSELNYLDIESNEIVEELTETTCTNRIPVSVSKTLNRISNSDLIRMEAAGNGGRAEGSSSPKPLKFSAYQNPALSAALTVNSIQPSKFTFLCIFSLSSASAFAFLRVVSWENAIIDSLKVKNIPEEAAYVSAKAVQTVVGLVFLGTVLAFFKAIFLYRRRFSGGVSVVSASNGSKDQTPLSKRQLGLMGLKPKVENGTSEKALKPPKSKPYSSPPSSDVLVPLHQSMGSFGYSSQRNTDKSNSVGGSKMQSFTSPAKSPGSDSSFYLVSGVASPLPSALSSSGRDSVVCTSWSSKRVSSLKEITSEEEFERFLTEVDEKLTESAGKLATPPPTISSVGLTSPSTVDTSANTSGTTRSTPLRPVRMSPSSQKFKTPPKKGEGDPPSPMSMEEMVEAFKHLGVYPQIEEWRDRLRQWFSSILLNPLVEKIETSHVQVKEVAAKLGISITVSPVGDSSGTLPTVSSVDRTNEWQPTLAIDEDGLLHQLRATLVQSIDASKIKMPLVNIQRSPQQNPSVPIMQECVDAIVDHQKLLALMKGELVKGLLPQSSIRADYTVQRIKELSEGSCLKNYEYLVTGEVYDKKNKKWTLDLPTDSHLLLYLFCAFLEHPKWMLHLDPSTYAGAQSSKNPLFLGVLPPKERFPEKYIAIIYGAPSIIHPGACILAVGRKSPPVFSLYWDKKLQFSLQGRTALWDAILLLCHRVKVGYDGIIRGMHLGSSALRVHPVLNSEPVD 1264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2853633 2863599 - CmoCh01G005680.1 Cmo01g00568 374051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g00568 1264 MobiDBLite consensus disorder prediction 137 157 - -
Cmo01g00568 1264 MobiDBLite consensus disorder prediction 729 751 - -
Cmo01g00568 1264 MobiDBLite consensus disorder prediction 855 921 - -
Cmo01g00568 1264 PANTHER MLO-LIKE PROTEIN 1 2 523 IPR004326 GO:0006952|GO:0016021
Cmo01g00568 1264 PANTHER MLO-LIKE PROTEIN 2 523 - -
Cmo01g00568 1264 MobiDBLite consensus disorder prediction 861 906 - -
Cmo01g00568 1264 Pfam Mlo family 10 491 IPR004326 GO:0006952|GO:0016021
Cmo01g00568 1264 MobiDBLite consensus disorder prediction 764 793 - -
Cmo01g00568 1264 Pfam Cytochrome B561, N terminal 598 1258 IPR019176 -
Cmo01g00568 1264 MobiDBLite consensus disorder prediction 141 157 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00568 Cmo-Chr1:2853633 Cmo13g00190 Cmo-Chr13:1336245 0 dispersed
Cmo13g00191 Cmo-Chr13:1342882 Cmo01g00568 Cmo-Chr1:2853633 0 transposed
Cmo01g00568 Cmo-Chr1:2853633 Cmo13g00188 Cmo-Chr13:1302615 5.40E-154 wgd
Cmo01g00568 Cmo-Chr1:2853633 Cmo02g00883 Cmo-Chr2:5467485 6.05E-165 wgd
Cmo01g00568 Cmo-Chr1:2853633 Cmo20g00511 Cmo-Chr20:2450421 8.99E-159 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g00568 - - bhj:120083853 1148.27