Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo01g00584 | ATGGCTGATGTTGGTCAGAACAACACCGGTGATTTTCCTGCTGTTCCTACCCATGGCGGTCAATATGTGCAGTATAATATCTTCGGGAATCCGTTTGAAATCACCTCCAAATATCGTCCGCCTATCATGCCTGTAGGTCGCGGCGCCTACGGAATCGTTTGTTCGATTTTGAATTCGGAGACCAACGAGATGGTTGCGGTTAAGAAGATTGCCAACGCGTTTGATAATCATATGGATGCGAAACGGACGCTCCGTGAGATCAAGCTTCTCCGGCATTTGGATCACGAAAATGTAATAGGCATAAGAGATGTGATTCCTCCTCCTGTGCGGAGAGAATTCAGTGATGTCTACATTTCCACTGAACTAATGGACACCGATCTTCACCAAATAATCCGCTCGAACCAAACTTTATCAGAAGAGCATTGTCAGTATTTCCTTTATCAGATTCTCCGAGGACTTAAATACATACATTCTGCAAATGTCATTCATCGGGACTTGAAACCGAGCAATCTACTGCTTAATGCGAACTGTGATCTTAAAATTTGTGACTTTGGTCTTGCTCGTCCAACTTCGGAAAATGAAAGCATGACAGAATATGTTGTTACGAGATGGTATAGGGCACCTGAGTTACTATTGAACTCTGATTATACAGCTGCTATTGATATATGGTCTGTTGGTTGCATCTATCTGGAGCTTATGAATAGAAGGCCTCTATTTCCAGGCAGGGATCATGTGCATCAGATGCGTTTACTGACTGAGCTTCTTGGCACACCAACCGAATCGGATCTTGGTTTCATTCGAAACGAAGACTCGAAGAGATATCTTCGGCAGCTACCTCCACATCCTCGTCAGCCATTAGCAACAGTTTTCCCTCATGTTCATCCTTTGGCAATTGATCTTGTGGATAGAATGTTGACGTTTGATCCAACCAGGAGAATTACTGTTGAAGAAGCATTGGCACATCCATACCTAGAGAGACTGCACGACGTAGCTGATGAGCCAGTTTGCCCCGTGCCATTCTCGTTCGAGTTTGAGCAACAATACCTGGATGAAGAGCAGATGAAGGAGATGATTTACAGAGAAGCATTGGCACTCAATCCAGAATTTGCATGA | 1113 | 44.12 | MADVGQNNTGDFPAVPTHGGQYVQYNIFGNPFEITSKYRPPIMPVGRGAYGIVCSILNSETNEMVAVKKIANAFDNHMDAKRTLREIKLLRHLDHENVIGIRDVIPPPVRREFSDVYISTELMDTDLHQIIRSNQTLSEEHCQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENESMTEYVVTRWYRAPELLLNSDYTAAIDIWSVGCIYLELMNRRPLFPGRDHVHQMRLLTELLGTPTESDLGFIRNEDSKRYLRQLPPHPRQPLATVFPHVHPLAIDLVDRMLTFDPTRRITVEEALAHPYLERLHDVADEPVCPVPFSFEFEQQYLDEEQMKEMIYREALALNPEFA | 370 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 2961319 | 2964266 | + | CmoCh01G005840.1 | Cmo01g00584 | 374067 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo01g00584 | 370 | Gene3D | Phosphorylase Kinase; domain 1 | 22 | 361 | - | - | |
Cmo01g00584 | 370 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 15 | 369 | - | - | |
Cmo01g00584 | 370 | CDD | STKc_TEY_MAPK | 32 | 367 | - | - | |
Cmo01g00584 | 370 | ProSitePatterns | Protein kinases ATP-binding region signature. | 45 | 69 | IPR017441 | GO:0005524 | |
Cmo01g00584 | 370 | Gene3D | Transferase(Phosphotransferase) domain 1 | 123 | 351 | - | - | |
Cmo01g00584 | 370 | ProSitePatterns | MAP kinase signature. | 74 | 177 | IPR003527 | GO:0004707|GO:0005524|GO:0006468 | |
Cmo01g00584 | 370 | Pfam | Protein kinase domain | 44 | 324 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo01g00584 | 370 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 15 | 369 | - | - | |
Cmo01g00584 | 370 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 161 | 173 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo01g00584 | 370 | ProSiteProfiles | Protein kinase domain profile. | 39 | 324 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo01g00584 | 370 | SUPERFAMILY | Protein kinase-like (PK-like) | 44 | 332 | IPR011009 | - | |
Cmo01g00584 | 370 | SMART | serkin_6 | 39 | 324 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g00584 | Cmo-Chr1:2961319 | Cmo05g00453 | Cmo-Chr5:2102114 | 0 | dispersed | |
Cmo01g00581 | Cmo-Chr1:2943268 | Cmo01g00584 | Cmo-Chr1:2961319 | 8.03E-122 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74027 | PF00069 | Pkinase | 6.10E-73 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo01g00584 | K20536 | - | csv:101202796 | 728.398 |