Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g00644 ATGCTTCCTCTTCTTCTTTTATTTGGTCTCCTCCTCCTCCTCCTCCTCTGCCTCCAATGGCGCCACCCCAACCACCACCTCCTCCCCCCTGGCTCCATGGGCTGGCCTTACACAGGCGAAACCTTCAAACTCTACACCCAAAACCCCAACTCCTTCTTCTCCATTAGGCAAAAAAGATATGGGGATGTGTTTAAGACACACATATTGGGGTGTCCATGTGTGATGATTTCAAGCCCTGAGGCTGCCAGAGTTGTGCTTGTGAGTAAGGCTCATCTCTTCAAGCCAACCTACCCACCAAGCAAAGAGAAAATGATTGGCCCTCAAGCTTTGTTCTTCCACCAAGGCCCTTACCATTCTCGCCTCAAGAAGCTCATCCAAGCCTCCTTTTTGCCCTCTGCAATCAAACCCTCTGTCTCTCAAATTGAGAACATCGTGCTTCGCCTTTTACCCTCTTGGGATAACTCCCAAATCAATACCTTACAACAATTGAAAAGGTTTGCTTTTGATGTGGCGATGATCTCCGCTTTTGGTGACCAACAAGACTTGGAAATTGAGAGAATTAAACATCTGTACCAATGCCTTGAAAAAGGCTATAATTCTATGCCTCTTGATCTTCCCGGAACGCCTTTTCGTAAAGCAATGAAGGCGAGGAAGTTGCTGAGTGAGACATTGGGGAAATTGATTGAGAAAAGACAGCGGAGCAATGAGTATGGCGGTGGGTTGCTGGCGGTGCTTTTAGGCGGCGACGGCGACGGCGACAAAGTGGAGAAAAATAAGCTGAGTAATTCACAAATTGCTGATAACATAATAGGAGTGATCTTTGCAGCTCAAGACACGACAGCCAGTGTTCTAACATGGATTCTCAAGTACTTACATGATGATCACCATCTTCTTGAAGCTGTTAAGAAGGAGCAGGACGCCATATTTGAGGAGAGGGTGAGGGAAGGGGGGCGTGGGCTTACATGGGATGACACGAGGCGCATGGCATTGACAAGTCGGGTGATCCAAGAAACCCTAAGAACAGCAAGTGTTCTGTCGTTCACGTTCAGAGAGGCAGTGGAAGAGGTGGAGTTCGAAGGTTATTTAATCCCAAGAGGATGGAAAGTTCTTCCGCTGTTCAGAACCATTCATCACTCTGCACATTTCTTCCCACACCCCGAGAAGTTTGATCCTTCAAGATTCGAGGTGCCACCCCGACCAAACACGTACATGCCATTTGGAAATGGAGTGCACTCATGTCCCGGCAGCGAGATGGCTAAGCTTGAAATCCTCATTCTTCTCCACCACCTCATCACCGGTTACAGATGGAAAGTGGTGGGAGAGGAATCTGGGATACAATACGGTCCATTTCCTGTACCTAAAGGTGGCTTACCCATTAAAGTATTTTCAAGGAAGAACAAGATTACTTCTTTGAATTGA 1419 47.36 MLPLLLLFGLLLLLLLCLQWRHPNHHLLPPGSMGWPYTGETFKLYTQNPNSFFSIRQKRYGDVFKTHILGCPCVMISSPEAARVVLVSKAHLFKPTYPPSKEKMIGPQALFFHQGPYHSRLKKLIQASFLPSAIKPSVSQIENIVLRLLPSWDNSQINTLQQLKRFAFDVAMISAFGDQQDLEIERIKHLYQCLEKGYNSMPLDLPGTPFRKAMKARKLLSETLGKLIEKRQRSNEYGGGLLAVLLGGDGDGDKVEKNKLSNSQIADNIIGVIFAAQDTTASVLTWILKYLHDDHHLLEAVKKEQDAIFEERVREGGRGLTWDDTRRMALTSRVIQETLRTASVLSFTFREAVEEVEFEGYLIPRGWKVLPLFRTIHHSAHFFPHPEKFDPSRFEVPPRPNTYMPFGNGVHSCPGSEMAKLEILILLHHLITGYRWKVVGEESGIQYGPFPVPKGGLPIKVFSRKNKITSLN 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3292627 3297558 + CmoCh01G006440.1 Cmo01g00644 374127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g00644 472 Gene3D Cytochrome P450 20 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g00644 472 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g00644 472 PRINTS E-class P450 group I signature 264 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g00644 472 PRINTS E-class P450 group I signature 284 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g00644 472 PRINTS E-class P450 group I signature 332 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g00644 472 PRINTS E-class P450 group I signature 372 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g00644 472 PRINTS E-class P450 group I signature 403 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g00644 472 PRINTS E-class P450 group I signature 413 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g00644 472 PANTHER ABSCISIC ACID 8'-HYDROXYLASE 2 7 462 - -
Cmo01g00644 472 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g00644 472 PRINTS P450 superfamily signature 333 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g00644 472 PRINTS P450 superfamily signature 404 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g00644 472 PRINTS P450 superfamily signature 413 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g00644 472 Pfam Cytochrome P450 29 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g00644 472 PANTHER CYTOCHROME P450 26 7 462 - -
Cmo01g00644 472 SUPERFAMILY Cytochrome P450 22 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g00644 472 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 406 415 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00644 Cmo-Chr1:3292627 Cmo04g00643 Cmo-Chr4:3182160 0 dispersed
Cmo01g00644 Cmo-Chr1:3292627 Cmo16g00553 Cmo-Chr16:2690840 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g00644 K09843 - csv:101216531 801.971