Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g00657 ATGGCGGAGGAGGAAGTGCCAATTTTAAGAACAGAGCATTCGCTTGATGTTTTGATTCCAGTAATTGCTAAGAAGAGGAATGTTTCTATTCCGAATCCCCTAGATGTAAACTGTTGTCGTTCTGGCTGTCCGTTTTCCAGATTAGAACATAGTAATCTAGAGTCATTAACACGATCGAAGTCCGCTATGAAGCTCGGTGGATTGATATTGTTCTATGTAATCGCTATCATTGTAGAGATCATTGGTGGCTTGAGAGCCAATAGTCTTTCTGTATTGACTGATGCAGCTCACTTGCTTAGTGATGTTGCTGGTTTCTCTGTTTCCCTCTTTGCTGTCTGGGTTTCAGGCTGGGCGGCCACACCACAACACTCATTTGGGTTTAATCGCCTTGAAGTTATTGGCGCCCTTGTGTCTGTGCAGCTCATATGGCTGATTTCTGGGTTCTTAATCTACGAGGCAGCCAATCGGATCCTCGGCCAAAAGACAAAGGTTAATGGATTGCTCATGTTCGCCATTGCAGCTTTTGGCTTCCTCCTTAACTTAGTTATGGTCATGTGGCTTGGCCATAGCCATAGCCATAGCCATAGCCATTCTTGTCATCATGATCACTTGGATCATGACACTGACCATGAGGAGGAGGGACATTCACACAGTTCAAGTCCGAACATAAATCTCCAAGGTGCTTATCTTCATCTCATCTCTGATATGATTCAATCTGTTGGTGTGATGGTTGCTGGAGCTGTTCTATGGCTTAAACCCAACTGGGTCGTGGTGGATTTAATCTGTACTCTTGTGTTTTCTGTTCTTGCTTTAGCTACTACTGTTCCCATGCTTAGACATATAGGTGGTATACTGATGGAAGGAACACCCAAGGAGATCAACATTGAGAGGCTAGAACATGATATCAAGAACATCAAAGGTGTTCTTGCTTTGCATGACTTGCATATTTGGTCAATAAGTGTCGGCAAAGTTGTGTTGTGTTGCCATGTTGTAGTTGATCATGGAGTTTGTGTTAGGGATACAATTTCTAAGATTAGGAACCTCTGTGAAAAGGGATATAATATAGTTCATACCACCATTCAAGTAGAGTAG 1092 42.86 MAEEEVPILRTEHSLDVLIPVIAKKRNVSIPNPLDVNCCRSGCPFSRLEHSNLESLTRSKSAMKLGGLILFYVIAIIVEIIGGLRANSLSVLTDAAHLLSDVAGFSVSLFAVWVSGWAATPQHSFGFNRLEVIGALVSVQLIWLISGFLIYEAANRILGQKTKVNGLLMFAIAAFGFLLNLVMVMWLGHSHSHSHSHSCHHDHLDHDTDHEEEGHSHSSSPNINLQGAYLHLISDMIQSVGVMVAGAVLWLKPNWVVVDLICTLVFSVLALATTVPMLRHIGGILMEGTPKEINIERLEHDIKNIKGVLALHDLHIWSISVGKVVLCCHVVVDHGVCVRDTISKIRNLCEKGYNIVHTTIQVE 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3357335 3358426 + CmoCh01G006570.1 Cmo01g00657 374140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g00657 363 Pfam Cation efflux family 69 286 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Cmo01g00657 363 MobiDBLite consensus disorder prediction 198 217 - -
Cmo01g00657 363 SUPERFAMILY Cation efflux protein transmembrane domain-like 68 287 IPR027469 -
Cmo01g00657 363 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 4 363 - -
Cmo01g00657 363 Gene3D Cation efflux protein transmembrane domain 65 285 IPR027469 -
Cmo01g00657 363 PANTHER METAL TOLERANCE PROTEIN B 4 363 - -
Cmo01g00657 363 TIGRFAM CDF: cation diffusion facilitator family transporter 69 363 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Cmo01g00657 363 MobiDBLite consensus disorder prediction 198 220 - -
Cmo01g00657 363 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 291 363 IPR036837 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00657 Cmo-Chr1:3357335 Cmo17g00587 Cmo-Chr17:6223803 3.91E-96 dispersed
Cmo01g00657 Cmo-Chr1:3357335 Cmo11g01080 Cmo-Chr11:6053691 2.50E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g00657 K14689 - csv:116403740 482.256