Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g00662 ATGGACGCTACTGACGAGACTCACCACCACCATATGCAAGGTATGGCGCCGCCGCCGGCCTCTTCCGCCGCGTCGTCGGGGATGACGATGCATCACCGGATGATGCACATGACCTTCTTTTGGGGAACTAACGCTGAGATTCTGTTCCGTAACTGGCCTGGAGACCGATCCGGTATGTACGCCTTGGCCTTGATCTTCATATTCGTGCTTGCTTTCCTCGTCGAGTGGCTTTCGCATAGCCGATTGATTAGGGAAGATTCTAGCTCCGTAGCGGCTGGATTGATCCGGACTCTGATGCATACGGTTAGGGTTGGATTGGCGTATTTAGTGATGCTTGCGGTTATGTCGTTCAATGTTGGAGTGTTTTTGGTAGCAATCGGTGGTCATTGCCTCGGATTCTTCTTCTTTGGGAGTAGATTTTTCAAGAATTCAGGCGCGGCTTCTGGTAAATCCTCTGATCTTCCTCCTCTTAGTTGTTGA 480 51.04 MDATDETHHHHMQGMAPPPASSAASSGMTMHHRMMHMTFFWGTNAEILFRNWPGDRSGMYALALIFIFVLAFLVEWLSHSRLIREDSSSVAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVFLVAIGGHCLGFFFFGSRFFKNSGAASGKSSDLPPLSC 159
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3381526 3382005 - CmoCh01G006620.1 Cmo01g00662 374145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g00662 159 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 6 158 IPR007274 GO:0005375|GO:0016021|GO:0035434
Cmo01g00662 159 MobiDBLite consensus disorder prediction 1 26 - -
Cmo01g00662 159 Pfam Ctr copper transporter family 90 136 IPR007274 GO:0005375|GO:0016021|GO:0035434
Cmo01g00662 159 Pfam Ctr copper transporter family 37 82 IPR007274 GO:0005375|GO:0016021|GO:0035434
Cmo01g00662 159 PANTHER COPPER TRANSPORTER 6-LIKE 6 158 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00662 Cmo-Chr1:3381526 Cmo13g00093 Cmo-Chr13:546469 9.70E-78 dispersed
Cmo01g00661 Cmo-Chr1:3376865 Cmo01g00662 Cmo-Chr1:3381526 7.57E-35 tandem
Cmo01g00662 Cmo-Chr1:3381526 Cmo01g00663 Cmo-Chr1:3384798 1.21E-36 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g00662 K14686 - csv:116403768 219.935