Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g00692 ATGGCAGTTGGAGGGCTAGTGAATGCAACATGTGGGAATGTAACAGAGTTGATATTAGCAATGTTAGCATTACACCAAAACAAAATCCACATCTTGAAATTCTCCCTTTTGGGTTCCATTCTTTCCAATTTACTTCTAGTTCTTGGCACCTCTCTTCTCTTTGGAGGCTTATCCAATCTCAACAAGCAACAAACATTCAACCCAAAAGTCGCGAACGTAAGCTCTTTAGTGTTGCTACTCGGATTGCTATGCCAAATGCTGCCATTGATATCAAGATTTGCATCACCATCAGCTAAATTATGGACAGACATGTCTGTTCTAGAGCTATCAAGAACATGCAGCATCATAATGCTCATAGCTTATCTTGCTTATGTGTTCTTCCAATTGAAAACCCATAACCAATTTTTTGGTCTACCAGAGGAGGAAGAGGATGATGAAGAAATGGCAATAATTGGGGTTTGGAGCTCGTTTGGTTGGCTGGTGGGTATGACCATTGTCATAGCTGTTCTATCACAGTATGTTGTGGCTACAATTGAGGAGGCATCACAATCATGGGGCGTTTCGGTGAGCTTTATGAGTATAATTGTGCTGCCGATTATGGGATATAACACTTGGGATAGCATTGGGATCAGCAGCTCAAATTTCAGTGTGCCTTTGAGTGTAGCTGTTGGATGGTGTTCGAGCATCAAAATGGATCTTGATTTCGGTCTCATCGAAACTGCGTCTCTCGCCTTCGCCATCGTCCTCACTCTATTCACTCTACAAGTAACGTCCATCTAA 780 42.18 MAVGGLVNATCGNVTELILAMLALHQNKIHILKFSLLGSILSNLLLVLGTSLLFGGLSNLNKQQTFNPKVANVSSLVLLLGLLCQMLPLISRFASPSAKLWTDMSVLELSRTCSIIMLIAYLAYVFFQLKTHNQFFGLPEEEEDDEEMAIIGVWSSFGWLVGMTIVIAVLSQYVVATIEEASQSWGVSVSFMSIIVLPIMGYNTWDSIGISSSNFSVPLSVAVGWCSSIKMDLDFGLIETASLAFAIVLTLFTLQVTSI 259
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 3536729 3539452 - CmoCh01G006920.1 Cmo01g00692 374175
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g00692 259 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 255 - -
Cmo01g00692 259 Pfam Sodium/calcium exchanger protein 3 129 IPR004837 GO:0016021|GO:0055085
Cmo01g00692 259 Gene3D - 1 142 IPR044880 -
Cmo01g00692 259 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 2 255 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00692 Cmo-Chr1:3536729 Cmo07g01105 Cmo-Chr7:5785240 7.39E-74 dispersed
Cmo01g00692 Cmo-Chr1:3536729 Cmo06g00224 Cmo-Chr6:1201700 1.86E-63 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g00692 K07300 - csv:105436053 310.842