Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo01g00706 | ATGTCCGTCTCCGTCGCCGTTTCGAATTCGCCGGGGTTTTCCCCTTCGTCCTCGATGTTCTGCAACAAGGCGGCGATCATTTCTCCGGCGCCGGAAGCTCTAACACTGACGTTGGCTCATTTGAAGTCGTCTCAGCCTTCGTCGTCTTGCTCGTCTTCGCCGTCTTCCCCTTCTTCCCCTTTTTGGATTAGGTTTCCAAAGCCCCCTTCTGGGCTTTCCGCCGTGGCGCCAATGGCCTCCACTTCTTCTACTTCGTCTCCGACGTCGTCCAACTCGATCACGAAGAGGAAGAGACCAGCGAGGTTGGATATTCCGTTGACGCCGTTGAGCTTTGGAGCTCTGGCGTCGCCGTCGTCGTCGTTCGGGGACGTGATGGAGGCCGAGAGAGATGGGTATTCTGTTTATTGCAAGAGAGGGAGGCGGAGAATCTCCATGGAAGATCGGTATTCAGCCGCTGTTGATCTTCGTGGCGATTCTAAAGTGGCATTTTTTGGTGTATTTGATGGACATGGCGGTTCAAAGGCGGCAGAATTTGCAGCAAATAACTTAAAGAAGAACATAATGAACGAACTTGAAAGAATAGCTGACTATGAACAAGCCATTAAACATGGCTACCTCACCACAGATTCTGATTTCCTCAAGGAAGATCAACGCGGTGGGTCATGTTGTGTAACAGCCCTGATCAAGAAAGGCAACCTTATTATCTCCAACGCCGGTGACTGCCGTGCCGTTCTTAGCAGCAAGGGCGTCGCAGAAGCCATAACCTCCGACCACCGCCCGTCTCGAGAAGACGAAAGACAGCGAATCGAGTCGAGGGGTGGATATGTTGATCTCTGCAATGGCGTTTGGAGAGTCCAAGGATCTCTAGCTGTAACAAGAGGGATTGGAGATGCTCACTTGAAACAATGGGTGATAGCAGAGCCAGAGACAACGTCGATACGGATCGAAGCTCGACACGAGTTCTTGATCTTAGCCTCCGACGGGTTATGGGAAACGGTGAGCAATCAAGAAGCAGTGGACATCGTGCGCCCATTATGCGTGGGGATTGAGAAGGCAACGCCATTGGAGGCCTGTAAAAAGCTCGTGGAGCTATCACTTTCAAGAGGCTCAGTGGATGATATTAGTGTAGTTCTTATTCAATTGCCTAACTTCATTTGA | 1158 | 51.04 | MSVSVAVSNSPGFSPSSSMFCNKAAIISPAPEALTLTLAHLKSSQPSSSCSSSPSSPSSPFWIRFPKPPSGLSAVAPMASTSSTSSPTSSNSITKRKRPARLDIPLTPLSFGALASPSSSFGDVMEAERDGYSVYCKRGRRRISMEDRYSAAVDLRGDSKVAFFGVFDGHGGSKAAEFAANNLKKNIMNELERIADYEQAIKHGYLTTDSDFLKEDQRGGSCCVTALIKKGNLIISNAGDCRAVLSSKGVAEAITSDHRPSREDERQRIESRGGYVDLCNGVWRVQGSLAVTRGIGDAHLKQWVIAEPETTSIRIEARHEFLILASDGLWETVSNQEAVDIVRPLCVGIEKATPLEACKKLVELSLSRGSVDDISVVLIQLPNFI | 385 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 3618988 | 3621231 | + | CmoCh01G007060.1 | Cmo01g00706 | 374189 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo01g00706 | 385 | MobiDBLite | consensus disorder prediction | 75 | 95 | - | - | |
Cmo01g00706 | 385 | Pfam | Protein phosphatase 2C | 137 | 374 | IPR001932 | - | |
Cmo01g00706 | 385 | SMART | PP2C_4 | 122 | 379 | IPR001932 | - | |
Cmo01g00706 | 385 | SMART | PP2C_SIG_2 | 140 | 381 | IPR001932 | - | |
Cmo01g00706 | 385 | CDD | PP2Cc | 131 | 381 | IPR001932 | - | |
Cmo01g00706 | 385 | Coils | Coil | 180 | 200 | - | - | |
Cmo01g00706 | 385 | Gene3D | - | 132 | 384 | IPR036457 | - | |
Cmo01g00706 | 385 | ProSiteProfiles | PPM-type phosphatase domain profile. | 131 | 381 | IPR001932 | - | |
Cmo01g00706 | 385 | PANTHER | PROTEIN PHOSPHATASE 2C FAMILY PROTEIN-RELATED | 3 | 384 | - | - | |
Cmo01g00706 | 385 | MobiDBLite | consensus disorder prediction | 73 | 99 | - | - | |
Cmo01g00706 | 385 | ProSitePatterns | PPM-type phosphatase domain signature. | 163 | 171 | IPR000222 | GO:0043169 | |
Cmo01g00706 | 385 | PANTHER | PROTEIN PHOSPHATASE 2C | 3 | 384 | IPR015655 | GO:0004722|GO:0006470 | |
Cmo01g00706 | 385 | SUPERFAMILY | PP2C-like | 131 | 383 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g00706 | Cmo-Chr1:3618988 | Cmo04g00143 | Cmo-Chr4:736275 | 5.06E-120 | dispersed | |
Cmo04g01173 | Cmo-Chr4:5993736 | Cmo01g00706 | Cmo-Chr1:3618988 | 1.13E-09 | dispersed | |
Cmo13g00047 | Cmo-Chr13:280901 | Cmo01g00706 | Cmo-Chr1:3618988 | 5.80E-140 | transposed | |
Cmo15g00018 | Cmo-Chr15:135022 | Cmo01g00706 | Cmo-Chr1:3618988 | 9.24E-82 | transposed | |
Cmo01g00706 | Cmo-Chr1:3618988 | Cmo13g00046 | Cmo-Chr13:280223 | 1.26E-31 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo01g00706 | K17506 | - | csv:101207841 | 607.446 |