Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g00710 ATGAACAACAACCCATCACAGGAAAATGTTGAAACTGAAGGCATTTCTTCAAAGAATGTGAAGAATGAGTCCTACAGAAGTGTGCTTATGCTGGCTTACCAAAGTTTAGGAGTTGTTTACGGCGACCTCAGCACGTCGCCTCTGTATGTTTATAAAACCACATTCTCTGGGAAATTGAGTTTACATGAGAATGATGAAGAGATTTATGGGGTTTTATCCTTCATCTTCTGGACGTTTACACTCATTGCTCTCTTCAAATATGTTTTCATTGTCATGTCAGCCGACGATAACGGTGAAGGGGGTACCTTTGCTCTGTACTCTCTTCTCTGCAGGCATGCTAGATTATGCATTCTACCAAATCAAGAGCCTGCTGATGAGAAGTTATCTGCATATGAAATGAAGGAAAGCTTGGAGACAAGACCAAGTGCTGCTCTAAAATCTTTTTTTCAGCTGCACCCGTCTTTTCGAAAAGGTTTTTTGGTGTTCGTGCTCTTCGGAACCTCCATGGCTATTGGTGATGGAGTGCTCACTCCTGCAATATCAGTTCTTTCAGCAGTCTCGGGAGTCAAACATAAGATCACTGGACTCCATGAGAATTATGTTGTTTTAATCTCGTGCGTCGTCTTAGTTGGATTGTTCTCCCTTCAGCATTGTGGAACACACAAAGTTGCTTTCATGTTTGCTCCAATCATCACGACATGGCTCGTTTCTATTAGTGTTATCGGAATGTATAATATTATCAAGTGGAATCCGCGTATATACCATGCACTCTCACCAGTTTATATGCTGAAGTTCCTTCATAGCACGGGTGTTGAAGGTTGGATTTCATTAGGCGGAGTCGTTCTCTCGATAACAGGTGTGGAGGCAATGTTTGCTGATTTAGGCCACTTCTCGACGCTTTCGATCAAGATTGCCTTCACATTTCTTGTATATCCCTCATTGATTCTTGCTTATCTGGGTGAGGCTGCATTCCTTTCTAAGCATCATGAAGATATTCAGAGAAGCTTCTACAAAGCGATACCCGAAGCGGTGTTTTGGCCGGTGTTCGTCGTGGCCACTTTTGCTTCTGTTGTAGGAAGTCAGGCCGTGATTTCGGCTACGTTTTCGCTCGTAAACCAGTGCTGTGCTCTGAATTGCTTCCCCCATGTGAAAACTATGCACACTTCAAACCAGATATGTGGGCAAATTTATATTCCAGAAGTTAATTGGATGCTAATGTGCCTTTGTTTAGCTGTGACAATTGGCTTGAGAGACACGAACATGTTAGGCCATGCATATGGGCTGGCAGTCACCATTGTTATGTTCGTCTCGACTTGCTTGATGGCACTCGTGATACTAATCGTTTGGAAGCAGAGGTTGATTGGCGCCATAGCGTTTTTCATGTTTTTCGGGTCCATTGAACTACTTTACATCTCGGCATCAATCAGCAAAGTTCACAAAGGTGGGTGGATACCCGTCGTGCTGTCTATACTCTTTATGTGTTCGATGTATACATGGTACTACGGGACAATGAAGAAACACGAATACGACGATGAGAACAAAGTGTCGATGAATCGGATACTTTCTTCCGGGCCTAGCCTTGGCATAGTGCGTGTGCCCGGAATAGGCCTTATATACACTAGTCTGGTCTCGGGTGTTCCTGCTGTTTTTGGTCACTTTGTAACCACGTTGCCTGCATTTCATCAAGTGCTCGTGTTTGTTTGTATAAAGTACGTTCAAGTTCCCCATATCGACGAAGAACATCGACTGCTCATCACAAGGGTGGGATCGAAAGAATGCAACATGTTTCGGTGCGTCGTGAGGTATGGCTATAGGGATTTGTTACAAGAAAACTACGATTTCGAGAACAGGTTGGTGTTTTCTCTAATGCAATATGTAGAAACAGAAGATCAGTTTTGGAAACCAATGACACCTTGTGAATATGAACCATTGGAGCAGTCTTCCTACGAATATAAAGCGATGAATACTGCGGTCGACGATCGGGAGAAGTCGACACATAGCGAGGAAGCGATGCTGATAATGAGAGCGAAAGAGTCGGGAGTCACGTACATTTTCGGGCATTGCTCGGTCAAGGCCAAGAAATCGTCCTCCATTCTTAAGAAGTTGGGTATTGATATTGTGTATGCTTTTTTGAACCAGAATTGTAGAGAGCCTGAGGCTTTACTGAATGTGCCTCACACTTCTCTGTTGGAGGTTGGTATGGTTTATTATGTATAG 2217 43.53 MNNNPSQENVETEGISSKNVKNESYRSVLMLAYQSLGVVYGDLSTSPLYVYKTTFSGKLSLHENDEEIYGVLSFIFWTFTLIALFKYVFIVMSADDNGEGGTFALYSLLCRHARLCILPNQEPADEKLSAYEMKESLETRPSAALKSFFQLHPSFRKGFLVFVLFGTSMAIGDGVLTPAISVLSAVSGVKHKITGLHENYVVLISCVVLVGLFSLQHCGTHKVAFMFAPIITTWLVSISVIGMYNIIKWNPRIYHALSPVYMLKFLHSTGVEGWISLGGVVLSITGVEAMFADLGHFSTLSIKIAFTFLVYPSLILAYLGEAAFLSKHHEDIQRSFYKAIPEAVFWPVFVVATFASVVGSQAVISATFSLVNQCCALNCFPHVKTMHTSNQICGQIYIPEVNWMLMCLCLAVTIGLRDTNMLGHAYGLAVTIVMFVSTCLMALVILIVWKQRLIGAIAFFMFFGSIELLYISASISKVHKGGWIPVVLSILFMCSMYTWYYGTMKKHEYDDENKVSMNRILSSGPSLGIVRVPGIGLIYTSLVSGVPAVFGHFVTTLPAFHQVLVFVCIKYVQVPHIDEEHRLLITRVGSKECNMFRCVVRYGYRDLLQENYDFENRLVFSLMQYVETEDQFWKPMTPCEYEPLEQSSYEYKAMNTAVDDREKSTHSEEAMLIMRAKESGVTYIFGHCSVKAKKSSSILKKLGIDIVYAFLNQNCREPEALLNVPHTSLLEVGMVYYV 738
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3641878 3648143 + CmoCh01G007100.1 Cmo01g00710 374193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g00710 738 Pfam K+ potassium transporter 33 606 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo01g00710 738 PANTHER POTASSIUM TRANSPORTER 18 738 - -
Cmo01g00710 738 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 18 738 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo01g00710 738 TIGRFAM kup: potassium uptake protein 31 738 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00710 Cmo-Chr1:3641878 Cmo11g01702 Cmo-Chr11:12075480 0 dispersed
Cmo01g00710 Cmo-Chr1:3641878 Cmo11g01562 Cmo-Chr11:11227075 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g00710 K03549 - csv:101222845 1315.06