Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g00735 ATGGTTGACAACGGCGAGGAGAAATTGCTGGCTATGGCTCGCCACATAGCCAAGACTATGGGCCGCAACGAGTCCATGGCCGATGATATTCTCCAGATTTTTTCCAATTTCGATGCTAGGTTTTCCCTTGACAAGCTCTCTGATAAATCCGATGAGGTTGATCCCAGAAGCTCTGTCGCTTTGCAGCGCTCTCTCAAGTCTTTGGACCGCCGGATCTCCCAATATTTGGCTGCTGACCACCCGATTTGGGCGGATTCAGCCGATTCCGCTGCTTTTCTTGACGCTATTGATGAGTTGATTGCTACGATTAGGGACTGGACGCCGATGGCTAGGGATAAATCTGTTGGTACCTACCTTGCTCGCGCCGACGATCTGATGCAGCAGGCGATGTTTCGTGTAAGTGAAGAGTTTCGGTCGTTGATGGAGCGTGGAGGTGAGTCTTTTGAACTTACTCGGCATTTCAGGAACCGTGAGTCAACGGGCGAGTTTTTCTTCGATTCTGAGGAAGATGAGGAAGGTGCGGAAGGAATTCTTGGTGACGGCCTCCAGATCCCGGTGGCGCAGCCGGTGACAGACTACAACGTTGTAATCGATGCGCTTCCGTCGGGGACTATCAGCGATCTCCATGAGATAGCGAAGCGTATGGTGGCGGCTGGGTACGAGAAGGAGTGTTCGCACGCTTTCAGTAGCTGCAGGAGGGAGTTCTTAGAGGAGAGTCTTTCTAGGTTGGGGTTACAGAAGCTTAGCATCGATGAAGTTCAGAAGATGCAATGGCAAGACATGGAAGAGGAGATTGAGCGCTGGATGAAAGCGATTACCGTCTCCCTTCGAATCCTCTTCCCAAGCGAACGACGGCTCTGCGAACGAGTCTTCGTCGGCCTCTCCTCCGCCGCTGATCTCTCTTTCATGGAGGTCTGCCGAGGATCAACAATTCAGCTACTGAATTTCGCAGATGCGGTCGCAATCGGCTCGCGAGCGCCGGAACGACTGTTCAAAATCCTCGACATGTTCGAGACCTTGAGAGACTTGATGCTGGATTTCGATTCAGTATTTTCGGATCAGTACTGCTTGTTACTTAGAAACGAAGCAATCGCAATCTGGAAAAGGTTAGGCGGAACAATCAAGGGGATCTTCATGGAGCTCGAGAATTTGATCCGTCGTGATCCGGCTAAAACTCCAGTTCCGGGGGGCGGCCTTCATCCAATTACTCGGTATGTGATGAATTACCTTAAAGCAGCCTGTAAATCACGGCAGACTTTGGAGCAAATTTTCGAAGAAGCCGCTCTTCCTTCGAAGGATTACACCAAACTCGATGACAGAGCAACAGCATCGTCTTCATTATCAGTTCAAATGGACTGGATTATGGAGCTTTTAGAGAGCAATTTAGAGGCAAAATCAAAGATATACAACGATCTATCCTTAAGCTCTGTGTTTCTGATGAACAATGGCCGATACATTGTTCAGAAAGTGAAAGACAGCGAATTAGGATCGGTTTTAGGGGACGATTGGATTCGAAAGCACTCGGTTAAGAACAGGCAATACCTCGGAAATTTCCTGAAAAGTTCATGGAGCAAGGTGGTCGGAGTATTGAAAATTGACAGTGGCTCCATAGCTCCGGCTGTAATGAAAGAGAAGCTGAAATCATTCAACATACAGTTCGAAGAACTCTGCCAAACCCAATCTACATGGGTGATATCCGAGAATCAGCTTAGAGAAGAAGCAAAAATCTCAGTTACCAAAATCCTAATGCCTGCATATCAAAACTTCATCGAAAGGTACCAGAGTTTGCCGGAGTTGTCGAAGCGTACAGACCGGCATTTGATGTACACGGCGAAGGATGTGGAGGCTCAGATCACCCAGCTGTTCCAAGGAGGCGGCGGAAGGAGGTAA 1890 48.78 MVDNGEEKLLAMARHIAKTMGRNESMADDILQIFSNFDARFSLDKLSDKSDEVDPRSSVALQRSLKSLDRRISQYLAADHPIWADSADSAAFLDAIDELIATIRDWTPMARDKSVGTYLARADDLMQQAMFRVSEEFRSLMERGGESFELTRHFRNRESTGEFFFDSEEDEEGAEGILGDGLQIPVAQPVTDYNVVIDALPSGTISDLHEIAKRMVAAGYEKECSHAFSSCRREFLEESLSRLGLQKLSIDEVQKMQWQDMEEEIERWMKAITVSLRILFPSERRLCERVFVGLSSAADLSFMEVCRGSTIQLLNFADAVAIGSRAPERLFKILDMFETLRDLMLDFDSVFSDQYCLLLRNEAIAIWKRLGGTIKGIFMELENLIRRDPAKTPVPGGGLHPITRYVMNYLKAACKSRQTLEQIFEEAALPSKDYTKLDDRATASSSLSVQMDWIMELLESNLEAKSKIYNDLSLSSVFLMNNGRYIVQKVKDSELGSVLGDDWIRKHSVKNRQYLGNFLKSSWSKVVGVLKIDSGSIAPAVMKEKLKSFNIQFEELCQTQSTWVISENQLREEAKISVTKILMPAYQNFIERYQSLPELSKRTDRHLMYTAKDVEAQITQLFQGGGGRR 629
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3794549 3797106 + CmoCh01G007350.1 Cmo01g00735 374218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g00735 629 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 29 623 - -
Cmo01g00735 629 Pfam Exo70 exocyst complex subunit 266 619 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cmo01g00735 629 SUPERFAMILY Cullin repeat-like 83 622 IPR016159 -
Cmo01g00735 629 Gene3D Exocyst complex component Exo70 82 628 - -
Cmo01g00735 629 PANTHER EXOCYST COMPLEX PROTEIN EXO70 29 623 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00735 Cmo-Chr1:3794549 Cmo13g00835 Cmo-Chr13:7754168 1.28E-122 dispersed
Cmo01g00735 Cmo-Chr1:3794549 Cmo13g00020 Cmo-Chr13:176737 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g00735 K07195 - csv:101204511 1077.77