Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g00746 ATGGACTCGATGGGGAGACATTTGTGGTGTCTTTTTGTGTTTGTTTCGTTGATACCTTTCAACTTTGGCAGTTTATCTGCAAACTTTTATGAGAGCTCATGTCCTAAGCTACTCTCCACCGTCCGACGTGAAGTCGTGAAAGCAGTGGCCAAAGAGTATCGAATGGGGGCTTCGTTGCTTCGTCTTCATTTTCACGACTGCTTTGTTAATGGATGTGATGCGTCGGTGCTGCTAGACGACACGTCGAACTTCACCGGAGAAAAGACAGCAATCCCAAATAAAGATTCATTGAGAGGGTTTGAAGTGATCGACGGGATAAAAACGCTGGTGGAGGAGAGCTGCCCTTCAGTGGTTTCATGTGCTGATATTCTGTCCATTGCAGCCAGGGACTCAGTGGTTGCTCTCGGTGGGCCGTCGTGGGTGGTGGCGCTCGGGAGGAGAGACGCCACCACCGCCAGCTTCGACCGCGCAAACAATGACCTTCCTTCTCCCTTCCTCGACCTCCCTGATCTCGTCTCCGCCTTCTCCAACAAAGGCTTCGATACCAAAGAATTAGTCGCTCTTTCAGGATCGCATACAATAGGGCAAGCAAGGTGCTCGATGTTCCGAGTAAGGGCTCATAACGAAACGACTATTGATTCGGAGTTCGCAGCTTCTTTAAGATCAAACTGCCCTTTCTCCGGCGACGACGACAAGCTTTCGTCTTTAGACGTCCGCACGCCTTCCTCCTTCGACACGGCTTATTTCAAGAATTTGATACAAAACAAAGGTCTTCTTCATTCCGATCAAGCCCTCTTCAACAATGGCTCCGCCGATTCTCATGTCACCTCTTACTCCTCTAACCCCTCTGCTTTCTTCTCCGACTTCGCCGCCGCCATGGTTAAGATGTCTAATCTCAGCCCGCTCACTGGAACCGACGGCGAGATTCGTTCCGACTGCCGGAAGATCAATGCCTGA 957 50.57 MDSMGRHLWCLFVFVSLIPFNFGSLSANFYESSCPKLLSTVRREVVKAVAKEYRMGASLLRLHFHDCFVNGCDASVLLDDTSNFTGEKTAIPNKDSLRGFEVIDGIKTLVEESCPSVVSCADILSIAARDSVVALGGPSWVVALGRRDATTASFDRANNDLPSPFLDLPDLVSAFSNKGFDTKELVALSGSHTIGQARCSMFRVRAHNETTIDSEFAASLRSNCPFSGDDDKLSSLDVRTPSSFDTAYFKNLIQNKGLLHSDQALFNNGSADSHVTSYSSNPSAFFSDFAAAMVKMSNLSPLTGTDGEIRSDCRKINA 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3874647 3877046 + CmoCh01G007460.1 Cmo01g00746 374229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g00746 318 Pfam Peroxidase 41 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo01g00746 318 Gene3D - 28 317 - -
Cmo01g00746 318 PANTHER PEROXIDASE 72-RELATED 19 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g00746 318 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo01g00746 318 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo01g00746 318 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo01g00746 318 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo01g00746 318 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo01g00746 318 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g00746 318 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g00746 318 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g00746 318 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g00746 318 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g00746 318 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g00746 318 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g00746 318 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g00746 318 PRINTS Plant peroxidase signature 291 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g00746 318 ProSiteProfiles Plant heme peroxidase family profile. 24 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo01g00746 318 PANTHER PEROXIDASE 19 317 - -
Cmo01g00746 318 Gene3D Peroxidase, domain 2 162 296 - -
Cmo01g00746 318 CDD secretory_peroxidase 25 316 IPR033905 GO:0004601|GO:0042744
Cmo01g00746 318 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Cmo01g00746 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Cmo01g00746 318 SUPERFAMILY Heme-dependent peroxidases 25 317 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g00746 Cmo20g00342 CCT
Cmo01g00746 Cmo20g00342 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00746 Cmo-Chr1:3874647 Cmo15g00169 Cmo-Chr15:782241 1.74E-137 dispersed
Cmo19g00456 Cmo-Chr19:5523601 Cmo01g00746 Cmo-Chr1:3874647 6.64E-100 dispersed
Cmo01g00746 Cmo-Chr1:3874647 Cmo01g00748 Cmo-Chr1:3882023 6.09E-116 proximal
Cmo01g00746 Cmo-Chr1:3874647 Cmo02g00708 Cmo-Chr2:4439498 1.87E-123 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g00746 K00430 - csv:101221157 519.235