Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g00748 ATGAATATTATAATATTCGCGGCCTTGCTTTTCACGGCGGTTTCCGGCACGGCAGCCGCCGGCAGCTCCTCCTCTCATCTCTCCAAAAAGTTCTACCACACCAGCTGTCCTAACCTCTTCCCCATCGTCAAATCCATCCTTAAACATGAAATCTCAAAGGAACGACGCGTCGGAGCTTCTCTCCTCCGTCTCCACTTCCACGACTGTTTCGTCAATGGATGCGATGCATCGGTGTTGCTAGACGATCACGGGTCATTCGTAGGAGAGCAAAATGCAAATCCCAACAAAAACTCGCTTAGAAGTTTCAATGTGATTGATAAAATCAAGTCTAGAGTTGAGAAGTCGTGTCCTGGCGTGGTTTCGTGTGCTGATATCTTGACTATTGCTGCTCGGGATTCCGTTGCATTGCTTGGAGGGCCGTTTTGGAATGTTAAACTCGGGCGAAGAGACTCGAAAACCGCAAGCTTTTCTGATGCCAATAGCGGATTGCTTCCTTCACCAAACTCCAATCTCTCCGTTCTAATCTCTACGTTCAAAAAGCAAGGCCTTTCTACTACCGACATGGTTGCGCTCTCAGGAGGTCACACTATTGGACTAGCGAGATGCAGCCAATTCAAAACCCGCATATACCAGAAGAGCAATATCGACGCTGGATTTGCAAAGAAGAGACAGCGACAGTGTCCCAAAGAACAGCGGATAGGCATCGACAATCTTGCTCCATTCGACATCCAAACGCCCATGGTTTTCGACAACAAGTACTTCGACAACCTTATTAAGAAGAAAGGTCTACTACATTCCGACCAGGTGCTGTTTTCCGGCGGCTCCACCGACTCTGTAGTTAAAAAGTACAGCCGAGACAGTGAGGCCTTCAATCGAGACTTCGTTCGAGCCATGGTTAAGATGGCTCACATCCAACCCCTCACTGGGTCTGATGGCGAGATTAGAAAAGTCTGCGGAAGACCCAATTGA 969 48.3 MNIIIFAALLFTAVSGTAAAGSSSSHLSKKFYHTSCPNLFPIVKSILKHEISKERRVGASLLRLHFHDCFVNGCDASVLLDDHGSFVGEQNANPNKNSLRSFNVIDKIKSRVEKSCPGVVSCADILTIAARDSVALLGGPFWNVKLGRRDSKTASFSDANSGLLPSPNSNLSVLISTFKKQGLSTTDMVALSGGHTIGLARCSQFKTRIYQKSNIDAGFAKKRQRQCPKEQRIGIDNLAPFDIQTPMVFDNKYFDNLIKKKGLLHSDQVLFSGGSTDSVVKKYSRDSEAFNRDFVRAMVKMAHIQPLTGSDGEIRKVCGRPN 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3882023 3883424 + CmoCh01G007480.1 Cmo01g00748 374231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g00748 322 PANTHER PEROXIDASE 4 321 - -
Cmo01g00748 322 Gene3D - 30 318 - -
Cmo01g00748 322 SUPERFAMILY Heme-dependent peroxidases 27 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo01g00748 322 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo01g00748 322 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo01g00748 322 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo01g00748 322 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo01g00748 322 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo01g00748 322 Gene3D Peroxidase, domain 2 165 301 - -
Cmo01g00748 322 Pfam Peroxidase 44 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo01g00748 322 CDD secretory_peroxidase 26 320 IPR033905 GO:0004601|GO:0042744
Cmo01g00748 322 ProSiteProfiles Plant heme peroxidase family profile. 26 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo01g00748 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Cmo01g00748 322 PANTHER PEROXIDASE 72-RELATED 4 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g00748 322 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g00748 322 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g00748 322 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g00748 322 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g00748 322 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g00748 322 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g00748 322 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g00748 322 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g00748 322 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g00748 322 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g00748 Cmo02g00708 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00748 Cmo-Chr1:3882023 Cmo20g00342 Cmo-Chr20:1675436 1.57E-148 dispersed
Cmo01g00746 Cmo-Chr1:3874647 Cmo01g00748 Cmo-Chr1:3882023 6.09E-116 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g00748 K00430 - fve:101301085 406.757