Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo01g00780 | ATGGTATTCAAAGGCAGGTTTTTCTCCTCTTCCAAGAAGTCTGATTCTTCCAGTCCCGATGGATCCAGTCCTCGATTCCTTGGTTCTAACTCGCCCAGTAGATCCGACAAGAAGAAGAACAAATCAGCCGCCAAAGATGAACCCCAGATTTCTAATACCACTACTAGTAGCTTTAAAGGTACTGTTCTGAAAGATTCTACTAGGAGTAAGGATTGGAAACGAAAAGATGGTCAAGTTTTATTGCCGACTGAGACGCCATCGAAGTCCGAGGCAATATCTGGATTGAGCTTAGGGCCGAAGGTTAAGAAGTCGAGCGATGTGAAGGATGTGGCCTCATCGGTTTCGCCTATTCTCGCATCATCCCTTGGATTGAATAGGATAAAGACAAGATCAGGCCCGTTGCCGCAGGAGAGCTTTTTGGGGTTTAAAGGTGATAAGGGCTCATTGGGTTCGAGCAATCTTTCCAGGAACTGTGGCAATGGAAGCTCAGGCTCCAATTCTGGTTCGACATGGTCGGCGTCTTCTAGTGGAGGGAAGAGAGAGGCGGCGAGCCAGAAGAGATTGGGGTTTCAGGACAATGTTAAAAGCTATATTCACAATGCTAGCAATCCCGACAATATGGCAACTGGTAATGCAGCATCTACTGAAAGGAGTCCAAATTTGTTAGGACAGCCTCGGTTGCAGAATGTCGAATCATCCAATGAAGCTGGACGCAATGAATCATCATGGGCATTTTCAGAAGGATCAAGAAACATAGATTTCTGTACGCCAGAGTCTTCTTATGATTGTGAAAATCCAAAAGAGTCTGAATCTCCACGCTTTCAAGCTATACTTCGAGTCACAAGTGCTCCTCGAAGGAAGTATCCTGCGGATATCAAAAGTTTTTCCCATGAACTAAATTCAAAAGGTGTACGACCTTTCCCACTCTGGAAGTCACGTCGTTTAAATAATTTGGAGGAGATCTTAGTTATGATACGAGGAAAATTTGACAAGGCAAAGGAAGAAGTAAATTCTGATTTGGCCATTTTTGCTGCTGATCTGGTTGGAATTCTTGAAAAAAATGTTGATACTCATCCAGAGTGGCAAGAGACCATTGAAGACTTGTTGGTTTTAGCTCGAAGCTGTGCCATGTCATCTCCTGGTGAATTTTGGCTTCAGTGTGAAGGCATTGTTCAGGAATTGGATGATAGACGCCAAGAACTTCCTCCAGGCATGCTGAAACAACTTCATACTCGAATGCTGTTCATTCTCACTAGATGTACCAGGCTACTACAGTTCCATAAAGAAAGTGGGTTAGCAGAAGATGAGAATGTTTTTCAGCTTCGTCAATCACGAAATCTGCATTCTGCCGATAAACGTATTCCTCCAGCTATGGGAAGGGAAATGAAAAATTCTAATGCAGCCAAGGCTTCTAAGGCAGCTTCATCCAGGAAATCTTACAGCCAGGAGCAGCATGGCTTGAACTGGAGCAGAGAACACGACATGCTGCCTAGGAATAATGTCTCTGCATCTTCTGATGATACTTCAAAGAAGTTGGAATCTCCTACTGGCAGAGATCGGATGGCTTCTTGGAAAAAATTGCCTTCTCCGGCAGCCAAAAGTGTGAAAGAACCTACTTTGAAGGATAAAGGTGATAATAAGAGTTTTAAATCTTTGAATGTGCCAAAAATCAGGACTGATGTTTCTGAAACTGTTTTTGCTGCTGCAAATGAGCTTCCTCTGCCAAGAGATTCTCATGACCAGCCTACCAAGCACCAACATAAACCTTCTTGGGGTTGGGGTGATCAACCATCTGTATCTGAGGAGAGTTCAATCATTTGTCGCATTTGCGAAGAAGAGATTCCTACTGCAAATGTGGAAGACCATTCAAGAATTTGTGCAGTTGCTGATCGATGTGATCAGAAGGGTATAAGTGTTAATGAACGTCTACTCAGAATTGCTGAAACTCTAGAGAAGATGATTGAGTCCTTTTCGCAAAAAGATTCTCAACATGTAGGAAGTCCAGATGTTGCAAAAGTTTCAAATTCTAGTATGACTGAAGAATCTGATATTTCCCCGAAACATAGTGATTGGTCCCGCAGGGGCTCAGAAGACATGCTCGATTGCTTCCATGAAACTGAAAATTCTGTTTTCATGGATGACTTGAAAGGTTTACCTTCCATGTCTTGTAAAACTCGTTTTGGTCCAAAGTCTGATCAGGGTATGACAACATCATCTGCTGGTAGCATGACTCCTAGATCTCCTTTATTAACACCAAGAACCAGTCCGTTTGACTTGTTTTTGGCAGGGAAAGGTGCTTACTATGAACACGATGATCTTACACAGATCAGTGATCTTGCAGATATTGCACGCTGTTCAGCAAATGCTCCTCTGGGTGATGATTGCTCGATGCAATATCTGTTGACGTGCCTTGAAGACTTGAGAGTTGTCATTAACCGCAGGAAGTTTAATGCACTGACAGTTGAAACTTTTGGCACTCGCATTGAGAAGTTAATACGGGAGAAGTATTTGCAGCTTTGTGAGCTGGTGGGTGATGAAAAGATTGACATAGCGAGCACTGTTATTGATGAAGATACTCCTCTAGATGATGACGTTGTTCGTAGCTTAAGAACAAGTCCCATCCATTCTTCAAAGGACCGTACATCAATTGATGACTTTGAGATTATAAAACCTATCAGCCGTGGGGCATTTGGCCGGGTTTTCCTGGCTAAAAAGAGGACAACGGGGGACCTTTTCGCAATAAAGGTTTTGAAGAAAGCTGATATGATTCGAAAAAATGCTGTTGAAAGTATTCTGGCAGAACGTGATATTTTAATATCTGTGCGCAACCCTTTTGTGGTTCGCTTCTTCTACTCCTTTACTTGTCGTGAAAATTTATATCTCGTGATGGAGTATTTGAATGGAGGAGATCTTTACTCCTTGTTGAGAAATTTAGGCTGCTTAGATGAAGAGGTTGCTCGTGTATATATCGCAGAAGTGGTTCTTGCTTTGGAGTATTTGCATTCACTCGGGGTAGTTCATCGTGACTTAAAGCCGGATAATTTATTAATAGCACATGATGGTCATATTAAGCTGACAGATTTTGGGCTTTCCAAAGTTGGTCTTATCAACAGTACTGATGATTTGTCTGGACCAGTTGTTAGCGGTATCACTCTTCATGGGTATGATGAGCCTACAATGTCTGCTTCTGAGCATCAACAAGAAAGACGAAAGAAGCGTTCTGCTGTTGGCACTCCAGACTATTTGGCACCAGAGATACTATTGGGAACTGGACATGGTGCCACAGCTGATTGGTGGTCTGTCGGGATCATTTTATTTGAGCTAATTGTTGGAATTCCACCCTTTAATGCAGAGCATCCCCAGACTATATTTGATAACATTCTCAACCGTAAGATCCCGTGGCCTCAAATACCTGAAGAGATGAGCCACGATGCTCAAGATTTAATTGATCGATTATTGACTGAAGATCCTCACCAGCGACTTGGAGCTATAGGCGCACATGAGGTGAAGCAGCATATGTTCTTTAAAGATATTAACTGGGACACGCTTGCCCGACAAAAGGCTGCATTTGTTCCAACATCTGAAAGTGCTCTTGATACTAGTTACTTTACAAGTCGCTACTCATGGAATCATTCAGATGATCATGGCTATCCACCCAGTGAACTTGAGGATTCAAGTGATGCTGATAGCTTAAGTGGTAACAGTAGTGTGAGCAATCGTCAAGATGAAGTGGTTGATGAATGTGGGGGCCTTACAGATTTTGAGCCTGGTTCTTCTGTCAATTACTCATTCAGTAATTTCTCTTTCAAGAATCTCTCCCAGCTTGCATCCATCAACTATGACCTGCTTTCTAAGGGTTTGAAGGATGATCCTCCCGATCACGATGCATAA | 3891 | 42.71 | MVFKGRFFSSSKKSDSSSPDGSSPRFLGSNSPSRSDKKKNKSAAKDEPQISNTTTSSFKGTVLKDSTRSKDWKRKDGQVLLPTETPSKSEAISGLSLGPKVKKSSDVKDVASSVSPILASSLGLNRIKTRSGPLPQESFLGFKGDKGSLGSSNLSRNCGNGSSGSNSGSTWSASSSGGKREAASQKRLGFQDNVKSYIHNASNPDNMATGNAASTERSPNLLGQPRLQNVESSNEAGRNESSWAFSEGSRNIDFCTPESSYDCENPKESESPRFQAILRVTSAPRRKYPADIKSFSHELNSKGVRPFPLWKSRRLNNLEEILVMIRGKFDKAKEEVNSDLAIFAADLVGILEKNVDTHPEWQETIEDLLVLARSCAMSSPGEFWLQCEGIVQELDDRRQELPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDENVFQLRQSRNLHSADKRIPPAMGREMKNSNAAKASKAASSRKSYSQEQHGLNWSREHDMLPRNNVSASSDDTSKKLESPTGRDRMASWKKLPSPAAKSVKEPTLKDKGDNKSFKSLNVPKIRTDVSETVFAAANELPLPRDSHDQPTKHQHKPSWGWGDQPSVSEESSIICRICEEEIPTANVEDHSRICAVADRCDQKGISVNERLLRIAETLEKMIESFSQKDSQHVGSPDVAKVSNSSMTEESDISPKHSDWSRRGSEDMLDCFHETENSVFMDDLKGLPSMSCKTRFGPKSDQGMTTSSAGSMTPRSPLLTPRTSPFDLFLAGKGAYYEHDDLTQISDLADIARCSANAPLGDDCSMQYLLTCLEDLRVVINRRKFNALTVETFGTRIEKLIREKYLQLCELVGDEKIDIASTVIDEDTPLDDDVVRSLRTSPIHSSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLGVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPVVSGITLHGYDEPTMSASEHQQERRKKRSAVGTPDYLAPEILLGTGHGATADWWSVGIILFELIVGIPPFNAEHPQTIFDNILNRKIPWPQIPEEMSHDAQDLIDRLLTEDPHQRLGAIGAHEVKQHMFFKDINWDTLARQKAAFVPTSESALDTSYFTSRYSWNHSDDHGYPPSELEDSSDADSLSGNSSVSNRQDEVVDECGGLTDFEPGSSVNYSFSNFSFKNLSQLASINYDLLSKGLKDDPPDHDA | 1296 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 4055429 | 4073844 | - | CmoCh01G007800.1 | Cmo01g00780 | 374263 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo01g00780 | 1296 | Gene3D | Transferase(Phosphotransferase) domain 1 | 970 | 1193 | - | - | |
Cmo01g00780 | 1296 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 1176 | 1279 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Cmo01g00780 | 1296 | ProSiteProfiles | Protein kinase domain profile. | 886 | 1175 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo01g00780 | 1296 | SUPERFAMILY | Protein kinase-like (PK-like) | 883 | 1219 | IPR011009 | - | |
Cmo01g00780 | 1296 | MobiDBLite | consensus disorder prediction | 9 | 31 | - | - | |
Cmo01g00780 | 1296 | MobiDBLite | consensus disorder prediction | 495 | 510 | - | - | |
Cmo01g00780 | 1296 | MobiDBLite | consensus disorder prediction | 64 | 78 | - | - | |
Cmo01g00780 | 1296 | MobiDBLite | consensus disorder prediction | 1214 | 1243 | - | - | |
Cmo01g00780 | 1296 | Gene3D | Phosphorylase Kinase; domain 1 | 884 | 1204 | - | - | |
Cmo01g00780 | 1296 | Coils | Coil | 640 | 660 | - | - | |
Cmo01g00780 | 1296 | MobiDBLite | consensus disorder prediction | 189 | 244 | - | - | |
Cmo01g00780 | 1296 | MobiDBLite | consensus disorder prediction | 573 | 597 | - | - | |
Cmo01g00780 | 1296 | MobiDBLite | consensus disorder prediction | 726 | 748 | - | - | |
Cmo01g00780 | 1296 | MobiDBLite | consensus disorder prediction | 1 | 113 | - | - | |
Cmo01g00780 | 1296 | MobiDBLite | consensus disorder prediction | 1225 | 1242 | - | - | |
Cmo01g00780 | 1296 | PANTHER | SERINE/THREONINE PROTEIN KINASE IREH1-RELATED | 25 | 1293 | - | - | |
Cmo01g00780 | 1296 | SMART | serkin_6 | 886 | 1175 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo01g00780 | 1296 | MobiDBLite | consensus disorder prediction | 46 | 63 | - | - | |
Cmo01g00780 | 1296 | MobiDBLite | consensus disorder prediction | 447 | 551 | - | - | |
Cmo01g00780 | 1296 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 25 | 1293 | - | - | |
Cmo01g00780 | 1296 | CDD | STKc_MAST_like | 892 | 1180 | - | - | |
Cmo01g00780 | 1296 | MobiDBLite | consensus disorder prediction | 148 | 181 | - | - | |
Cmo01g00780 | 1296 | Coils | Coil | 315 | 335 | - | - | |
Cmo01g00780 | 1296 | MobiDBLite | consensus disorder prediction | 659 | 682 | - | - | |
Cmo01g00780 | 1296 | MobiDBLite | consensus disorder prediction | 468 | 486 | - | - | |
Cmo01g00780 | 1296 | MobiDBLite | consensus disorder prediction | 127 | 244 | - | - | |
Cmo01g00780 | 1296 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1005 | 1017 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo01g00780 | 1296 | MobiDBLite | consensus disorder prediction | 657 | 692 | - | - | |
Cmo01g00780 | 1296 | Pfam | Protein kinase domain | 886 | 1175 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g00780 | Cmo-Chr1:4055429 | Cmo15g01451 | Cmo-Chr15:9842541 | 0 | dispersed | |
Cmo01g00780 | Cmo-Chr1:4055429 | Cmo02g01030 | Cmo-Chr2:6257676 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74034 | PF00069 | Pkinase | 1.40E-65 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo01g00780 | - | - | csv:101214945 | 2253.79 |