Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g00838 ATGAACCCTACATTCAATCCATACCCAGATGAAAATTATGCAAAAATTAGGCGATTGATGAGGCAGACTGCGGATCATCACAACACCCTATCGGACAAGGATCCGCCCACCGATTTCAACAGCAACCAAGAAACCAAATGTGGGTTCAGTTCGATTCGAGTATTGGGTACGGTTGTGGTTTTGTTGATGTTCATTTCTGTGATCTTTTCACTCTCTGTTGTTCTTAGAGACCCGCCATCTGATGCTGCAAATGATGGCTCAGATATGTGGATTCCTCAGTGGAACTCTGACCTAGTGGATTCTAAGGATAGAGATCTTCATACGGCTATACAGCCAGAGGATAAACTGCTAAGTGGCCTTCTTTCTGCCAAACATGGTGTAGGTTCTTGTCTCAGTAGGTACAATTCAGTGTCTTATCAACACAAGCTGGCGTTCGAACCCTCTTCTTACCTGATCGCCCAATTGCGGCGTTATGAAGATCTTCATAAGCGTTGCGGAGTTTATACCGAATCTTATAACAAAACTTTGGAGTGGCTTAGGTCTAATGGTAGTAGCAGCTCCTCAGACTGTAGATATCTGATATGGATTTCCTTCAGTGGATTAGGGAATAGAATACTAACTCTTGCTTCGGCGTTCCTTTATTCTCTCCTCACGAATCGTGTCCTACTAGTCGACCCCGGAACCGACATGACTGATCTCTTCTGTGAACCATTTCCTGAGGTTTCCTGGTTTCTTCCCCAAGATTTTCCATTTAAAGAGAAGTTCAGCAACTTCAACCAGAACTCTTCTGATTGCTATGGGAAAATAATGAAGAACAGCATGAGAACAGATTCAAGTGGAGTGATCTTGCCTTCTGTTGTTTATCTTCATTTGGTGCATGATTATGATGATGATGATAAGCTTTTTTTCTGTGATCAAGACCAAGCTCTTCTGCAGCAATCACCATGGCTTGTTATGAAAACAGACAACTATTTTGTCCCATCTCTCTTTTTGATGTCGTCATTCGAGAAAGAACTCAATGATCTTTTCCCGAATAAAGATACCGTTTTCCACTTCTTGGGTCGATATCTGTTTCACCCCACGAATTCGGTTTGGGGACTGATTACGAGATATTATCAAGCTTACTTGGCTAGAGCTAGTGAAAGAATAGGTATTCAGATTAGAGTGTTTGATACAGGGACTGGACCTTTCCAACACATCCTGGATCAGGTTCTGACCTGTACCCTGAAGGAGAATCTGTTGCCACGAACCGATAGGCAGACGAATATGACCGGTCCAGTTAGTAATCCAAAGTCGAAGGCCGTGCTGATAACGTCCCTGAGCGCTGGTTACATGGAGAAGTTGAGAGACATTTACTGGGAGAATCCAACAGTGACGGGAGAGAGAATTAGTTTCTACCAACCAAGTCATGAGGAACACCAGCAAACTGAGAAGAGTATACATAACCAGAAGGCATTAGCAGAGATGTATTTGTTAAGTACAACTGATGTATTAGTCACCAGCTCATGGTCGACCTTTGGATATGTGGCTCAAGGTCTTGGCGGTCTGAAACCATGGATATTATACAAACCCGAAAACCGTACTGCCCCCGACCCACCTTGTGGTCAAGCCATGTCCATGGAACCCTGTTTCCATGCACCTCCTTTCTATGACTGCAAGGCTAAGAAAGGAGTTGACACTGGTAAACTTGTTCCTCATGTAAAGCATTGTGAGGACATGCCCTGGGGGATTAAGCTGGTTGATCGATATGATTGA 1755 43.7 MNPTFNPYPDENYAKIRRLMRQTADHHNTLSDKDPPTDFNSNQETKCGFSSIRVLGTVVVLLMFISVIFSLSVVLRDPPSDAANDGSDMWIPQWNSDLVDSKDRDLHTAIQPEDKLLSGLLSAKHGVGSCLSRYNSVSYQHKLAFEPSSYLIAQLRRYEDLHKRCGVYTESYNKTLEWLRSNGSSSSSDCRYLIWISFSGLGNRILTLASAFLYSLLTNRVLLVDPGTDMTDLFCEPFPEVSWFLPQDFPFKEKFSNFNQNSSDCYGKIMKNSMRTDSSGVILPSVVYLHLVHDYDDDDKLFFCDQDQALLQQSPWLVMKTDNYFVPSLFLMSSFEKELNDLFPNKDTVFHFLGRYLFHPTNSVWGLITRYYQAYLARASERIGIQIRVFDTGTGPFQHILDQVLTCTLKENLLPRTDRQTNMTGPVSNPKSKAVLITSLSAGYMEKLRDIYWENPTVTGERISFYQPSHEEHQQTEKSIHNQKALAEMYLLSTTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPDPPCGQAMSMEPCFHAPPFYDCKAKKGVDTGKLVPHVKHCEDMPWGIKLVDRYD 584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4470695 4473405 - CmoCh01G008380.1 Cmo01g00838 374321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g00838 584 PANTHER 2-ALPHA-L-FUCOSYLTRANSFERASE, PUTATIVE-RELATED 22 582 - -
Cmo01g00838 584 Pfam Xyloglucan fucosyltransferase 105 553 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cmo01g00838 584 Gene3D - 367 528 - -
Cmo01g00838 584 Gene3D - 187 241 - -
Cmo01g00838 584 PANTHER FUCOSYLTRANSFERASE 2-RELATED 22 582 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00838 Cmo-Chr1:4470695 Cmo16g00514 Cmo-Chr16:2484209 1.83E-167 dispersed
Cmo01g00838 Cmo-Chr1:4470695 Cmo13g01199 Cmo-Chr13:9446633 0 wgd
Cmo01g00838 Cmo-Chr1:4470695 Cmo04g01754 Cmo-Chr4:8850998 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g00838 K13681 - csv:101219153 1001.12