Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo01g00848 | ATGGGGTGTGTCAACACGAAGCATGCCGTGTCCGTTACGCCTGCATTCGATCACTCCGGTGTGTTTCGGGACAATGAATCCACGGCGATCGGCAACTCGGGTCGGAGCCGACTTGGGTTTGGGGAGATTGACAAGGGTTCGAAGCCCAAGTCCAAGACGAGGACGAAAGGGTCCCGTGACTTCAATGGGGTTGCGAGCGAGTTCGGTGAGTCGGGTCGAGCGAGTTCTAACGGCGGTGGGAATGATACTTTGAGCTTCCGAATCGGGAATTTTAATAAGTATATGGAAAGTGAGCAAGTGGCGGCGGGATGGCCTGCTTGGCTCTGCGCCGTCGCCGGTGAAGCCATTCAGGGCTGGGTTCCACTCCGCTCTGATGCCTATGAAAAATTGGAGAAGATTGGACAAGGTACATATAGTACTGTATTCCGAGCACGTGAACTCGAGACAGGAAGGATAGTCGCTTTAAAGAAGGTCCGTTTCGATAATTTCGAGCCCGAAAGTGTTCGGTTTATGGCACGAGAGATCATGATTCTGCGCAGGCTTGATCACCCCAATATCATCAAATTGGAGGGCTTAATCACGTCTCGTTTATCATGTAGCATTTACCTTGTGTTCGAGTACATGGATCATGACATTACTGGACTCTTGTCTTGCCCCGACATCACTTTTAGTGAATCACAGATTAAATGCTACATGAAACAATTGTTATCCGGGCTCGAGCATTGTCACTCACGTGGCGTAATGCATCGAGATATTAAAGGGTCTAATCTTCTAGTCAATAATGAAGGGGTATTGAAGGTGGCTGATTTTGGTTTGGCAAACTTCTGTAATTCGGGGCACCGACAACCTCTAACCAGTCGTGTTGTCACGCTATGGTATCGTCCTCCTGAACTTCTACTCGGCTCAACGGACTACAATGCATCTGTGGATCTTTGGAGCGTTGGCTGTGTTTTTGCAGAACTCCTTGTTGGGAAACCTATTCTTCAAGGAAGAACAGAGGTTGAACAGCTACACAAGATCTTCAAGCTTTGCGGCTCTCCTCCTGATGAATACTGGAAAAAATCTAAACTTCCACATGCTACTTTGTTCAAACCACAACATCCTTACAATAATTGTTTACGACAGACGTTCAAAGATTATCCTTCGACGACCGTGAACTTGTTAGAAACTCTTCTTTCTGTCGAACCATACAAGCGCGGAGTTGCATCCTCTGCTCTCACATCTGAGTATTTCAGTACAAAACCACACGCATGTGATCCATCAAGCATGCCAATATATCCACCAAGCAAAGAGATTGATGCAAAACAAAGAGAGGAGTCTAGAAGGAAAAAAGGCAGTGGAAGAACCCGTGGATTAGATAGCAGACGGTTAACTCGAAAGCATCTCGGAATCAGTAAATTAGCACCAGCAGAGGACTTATCGGTTTCAGCTCGAGATTTGCATAAGATTAGTATTAATGCTCAAAATCTTAAAGAAGAGAAGGTTATCAAAGGTGGTGAGGTGAAAAAGGTTTCAAATGATAAATTGGAAGAGTCTATGCATGTAAAGAATGCATCCCAAGGAGACATTCCCTTCTCTGGCCCCCTACAAGTTTCTACATCAAGTGGCTTTGCGTGGGCAAGACGACGAAGAGACGAAGCATCTATTAGATCGCATTCGAGATCAATTTCACGAGGACACGTAATTAATGGGCTGGATCATTCTGCTATATTGCATTCAAGAAGCAATGTGGACTCTAAGTTTCATGAAAAGGGAGACATGTTGTCCATCAGCTGTTCAAGTTCGAAGGGACGTGAATCAAACGAGAGATCCAAGGTTGTGATACGGAATCAATGGGGCAAGTTTGAGCGTCCCGATTCGTTTGATGCTTCGGATGAGTACCATTCGCAGGATTTTTCAGTGGCACTCTACTTGCAAGATGAAATGGAAGCTAAGAGGAGTAATCTGAGTTATCAGGACCAAGTGGACAAAGTTGAATACTCTGGGCCCTTGTTATCTCAATCGAGCCGAGTGGATGAACTCCTAGACAGACACGAGAGGCACATCCGACAGACAGTTCGAAGATCGTGGTTCCAAAGAGGTAAAAATTGA | 2091 | 45.72 | MGCVNTKHAVSVTPAFDHSGVFRDNESTAIGNSGRSRLGFGEIDKGSKPKSKTRTKGSRDFNGVASEFGESGRASSNGGGNDTLSFRIGNFNKYMESEQVAAGWPAWLCAVAGEAIQGWVPLRSDAYEKLEKIGQGTYSTVFRARELETGRIVALKKVRFDNFEPESVRFMAREIMILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMDHDITGLLSCPDITFSESQIKCYMKQLLSGLEHCHSRGVMHRDIKGSNLLVNNEGVLKVADFGLANFCNSGHRQPLTSRVVTLWYRPPELLLGSTDYNASVDLWSVGCVFAELLVGKPILQGRTEVEQLHKIFKLCGSPPDEYWKKSKLPHATLFKPQHPYNNCLRQTFKDYPSTTVNLLETLLSVEPYKRGVASSALTSEYFSTKPHACDPSSMPIYPPSKEIDAKQREESRRKKGSGRTRGLDSRRLTRKHLGISKLAPAEDLSVSARDLHKISINAQNLKEEKVIKGGEVKKVSNDKLEESMHVKNASQGDIPFSGPLQVSTSSGFAWARRRRDEASIRSHSRSISRGHVINGLDHSAILHSRSNVDSKFHEKGDMLSISCSSSKGRESNERSKVVIRNQWGKFERPDSFDASDEYHSQDFSVALYLQDEMEAKRSNLSYQDQVDKVEYSGPLLSQSSRVDELLDRHERHIRQTVRRSWFQRGKN | 696 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 4506386 | 4511557 | - | CmoCh01G008480.1 | Cmo01g00848 | 374331 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo01g00848 | 696 | ProSitePatterns | Protein kinases ATP-binding region signature. | 133 | 156 | IPR017441 | GO:0005524 | |
Cmo01g00848 | 696 | PANTHER | CELL DIVISION PROTEIN KINASE | 55 | 691 | - | - | |
Cmo01g00848 | 696 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 247 | 259 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo01g00848 | 696 | MobiDBLite | consensus disorder prediction | 413 | 457 | - | - | |
Cmo01g00848 | 696 | Gene3D | Phosphorylase Kinase; domain 1 | 114 | 209 | - | - | |
Cmo01g00848 | 696 | ProSiteProfiles | Protein kinase domain profile. | 127 | 411 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo01g00848 | 696 | CDD | STKc_CDK9_like | 127 | 411 | - | - | |
Cmo01g00848 | 696 | PANTHER | BINDING PROTEIN, PUTATIVE-RELATED | 55 | 691 | - | - | |
Cmo01g00848 | 696 | SMART | serkin_6 | 127 | 411 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo01g00848 | 696 | Pfam | Protein kinase domain | 127 | 411 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo01g00848 | 696 | MobiDBLite | consensus disorder prediction | 41 | 57 | - | - | |
Cmo01g00848 | 696 | MobiDBLite | consensus disorder prediction | 431 | 457 | - | - | |
Cmo01g00848 | 696 | Gene3D | Transferase(Phosphotransferase) domain 1 | 210 | 450 | - | - | |
Cmo01g00848 | 696 | SUPERFAMILY | Protein kinase-like (PK-like) | 121 | 417 | IPR011009 | - | |
Cmo01g00848 | 696 | MobiDBLite | consensus disorder prediction | 23 | 79 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g00848 | Cmo-Chr1:4506386 | Cmo13g01141 | Cmo-Chr13:9242670 | 0 | dispersed | |
Cmo01g00848 | Cmo-Chr1:4506386 | Cmo15g00259 | Cmo-Chr15:1251813 | 0 | wgd | |
Cmo01g00848 | Cmo-Chr1:4506386 | Cmo04g02916 | Cmo-Chr4:20692719 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74036 | PF00069 | Pkinase | 7.10E-69 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo01g00848 | - | - | csv:101220347 | 1259.2 |