Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo01g01061 | ATGGTGCCTTCGGGGCCATCCACTCCCATTGGTGGTGCGCAGTCTGTTTCACCATCGCTTTTGAGATCAAATTCTGGAATGATGGGAGCACAAGGGGGGCTGCCTTCTCAGTCAGCTTTTCCTTCTCTTGTATCTCCACGAACTCAGTTTAGTAGTATGAATATGCTTGGTAATATGCCCAGTATGTCTTCTCTCCTTAATCAATCATTTGGGAATGGAGTTCCAAATTCTGGGCCCTCAGGTCTTGGAAACAGCCAACGAGGAAGTATGGACCCTGGTTCCGAGTCAGATCCATTTTCACTTGTTGGCAATGGTGTGAACTTCAATAATACGCCATCATCATTAGGGGCATCAAATACAGGAAACCCTGCTTCATCCAGTCAAGTTTCAGGGCCACAATTTTCAAACCATTCTAGCAGCCAAATAATACCCAATCAACAGCAGCCCCAGCAAATTGAGCCCCAGAACTTCCAACATAGTCAGCATTCAATGCAGCAGTTCGTTAGCTCTAATAATGCACAGCAGTCACAGCAGCAGCAGCAGCAGCAACAACAACAACAACAACATCAATTCCAACCTATACGAGGAAGCTTATGTGGTGTTGGACCTGTCAAGTTAGAGTCTCAAATGAATAATAATGATATTCAGGGGCAGCAACTACAGCAGCAGCAGCAGCAGCTGCAGTCAATGAGGAACCTTGGTCCTGTGAAACTGGAACCTCAACAACTTCAATCAATGAGAAACTTGGGTCCTGTGAAATTGGAACCTCAACAGTCTGATCAGTCATTGTTTCTACAGCAGCAACATCAACATCAGCAGCAGCAACAACAGCAGTTGCTCAGTATGTCTAGGCAGTCCTCTCAGGCGGCTGCTGCTGCGCAGATTAATCTTTTGCAACAACAAAGGCTCTTGCAATTTCAACACCAACAGCAACTCCTGAAGGCTATTCCTCAGCAAAGACCGCATTTGCCTCAACAATTTCAACAACAAAATTTGCCATTAAGATCCCCTGTAAAACCAGTTTATGAACCTGGCATGTGTGCTCGGCGTTTAACAAATTATATGTGTCAACAGCAGCAGAGACCTGAAGACAACAATATTGCATTCTGGAGGAAATTTGTTGCGGATTACTTTGCTCCACATGCCAAAAAGAAATGGTGTGTCTCCATGTATGGAAATGGACGCCAAACAACTGGTGTATTTCCACAGGATGTTTGGCATTGTGAAATATGCAACCGCAAGCCTGGTCGAGGTTTTGAAGCAACCTTTGAAGTTCTTCCAAGGCTGTTCAAAATCAAATATGAAAGTGGAACTCTTGAAGAACTTCTCTATATTGATATGCCCCGCGAATATCATAATTCCTCTGGACAAATTGTCCTAGATTACGCCAAAGCAATACAAGAAAGTGTGTTTGAGCAACTTCGTGTTGTTCGTGATGGCCAACTTCGGATAGTTTTTTCTCCAGACTTAAAGATATGTTCTTGGGAATTTTGTGCTCGACGTCATGAAGAGCTTATTCCTCGAAGGTTACTAATACCTCAGGTTAGTCAGCTGGGGGCAGCTGCTCAGAAGTATCAGACTGCTATTCAAAAGGCATCATCTAACTTGTCTACTCCCGAGTTGCAAAATAACTGTAACATGTTTGTGGGCTCAGCTAGACAATTGGCCAAGGCATTGGAAGTGCCATTAGTAAATGACTTGGGATATACGAAGAGATATGTCCGGTGCCTTCAGATATCAGAAGTCGTCAATAGTATGAAGGACTTGATAGATTACAGTCAAGAAACTTCGACAGGGCCAATTGAGAGTTTGGCCAAGTTTCCACGGAAGACAAATGCTTCACCAGGATTCCTCAGCCAAGCTCAAAACACTGAGCAACAATTACCTCAACCCCAGCAAACAATTGATCAAAACACAAACGGCGACCAAAGCTCTGTTCCGGCTTCTGCTAACAATGGTGCTCCAAATGCAAATAACCCCGCGAATCCAGCATCAACATCATCTCCTGCTAGTACCATTGTTGGGTTACTCCACCAGAATTCCATGAACTCCAGACAGCAGAACTCTATCAACAGTGCTGGAAGCCCTTATGCCGGGAACTCTGTGCAAATATCATCCCCAGGTTCCTCCACCACGATTGCTCAGGCACAAGCGAATCCCTCCTTCCATTCGCCTACATTGTCCTCATCTAACAATCCTCCGCAATCATCAATTGGAACTGCAACTACTAATCACGTAAGTGCCACAAACTCTCCGGTAAATGTTCCCCTGCAACAGCCAACACACTCCTCTGAAGCCGATCAATCCGATTCCCAGAGCTCCATGCAAAAGATTATTCAGGAATACATGATGTCAAACCAACTAAACGGGATGAACACAATGGCTGGTGTTTCCTCTCTAGCAGAGGATGTGAAACCTGTTAATGGGATGTTGGCAGCAAACAATATTATGAGTCTCAATGGACGGAACTGCCTGGTCGGGAGTGGAACTGCCAATGGTGTTTCTGGTATCAGGAGCATGGGGTATGGCTCGATGGGTGGTGGAGGACTTGCTCAGGCTTCTATGGTCAATGGAATGAAGTCTGCAATGGGAAGTAACTCGATTTCAAATGGGAGAATTGGGATGGCGTCATTGGCTCGAGAACAGAGCATAAATCATCAAGATTTGGGAGACCAGCTCCTTAATGGTCTGGGAGCAGTGAATGGGTTTAATAATCTTCAATTTGATTACTGA | 2733 | 44.9 | MVPSGPSTPIGGAQSVSPSLLRSNSGMMGAQGGLPSQSAFPSLVSPRTQFSSMNMLGNMPSMSSLLNQSFGNGVPNSGPSGLGNSQRGSMDPGSESDPFSLVGNGVNFNNTPSSLGASNTGNPASSSQVSGPQFSNHSSSQIIPNQQQPQQIEPQNFQHSQHSMQQFVSSNNAQQSQQQQQQQQQQQQHQFQPIRGSLCGVGPVKLESQMNNNDIQGQQLQQQQQQLQSMRNLGPVKLEPQQLQSMRNLGPVKLEPQQSDQSLFLQQQHQHQQQQQQQLLSMSRQSSQAAAAAQINLLQQQRLLQFQHQQQLLKAIPQQRPHLPQQFQQQNLPLRSPVKPVYEPGMCARRLTNYMCQQQQRPEDNNIAFWRKFVADYFAPHAKKKWCVSMYGNGRQTTGVFPQDVWHCEICNRKPGRGFEATFEVLPRLFKIKYESGTLEELLYIDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQTAIQKASSNLSTPELQNNCNMFVGSARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSQETSTGPIESLAKFPRKTNASPGFLSQAQNTEQQLPQPQQTIDQNTNGDQSSVPASANNGAPNANNPANPASTSSPASTIVGLLHQNSMNSRQQNSINSAGSPYAGNSVQISSPGSSTTIAQAQANPSFHSPTLSSSNNPPQSSIGTATTNHVSATNSPVNVPLQQPTHSSEADQSDSQSSMQKIIQEYMMSNQLNGMNTMAGVSSLAEDVKPVNGMLAANNIMSLNGRNCLVGSGTANGVSGIRSMGYGSMGGGGLAQASMVNGMKSAMGSNSISNGRIGMASLAREQSINHQDLGDQLLNGLGAVNGFNNLQFDY | 910 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 8524802 | 8539077 | - | CmoCh01G010610.1 | Cmo01g01061 | 374544 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo01g01061 | 910 | MobiDBLite | consensus disorder prediction | 100 | 191 | - | - | |
Cmo01g01061 | 910 | MobiDBLite | consensus disorder prediction | 607 | 670 | - | - | |
Cmo01g01061 | 910 | MobiDBLite | consensus disorder prediction | 64 | 191 | - | - | |
Cmo01g01061 | 910 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Cmo01g01061 | 910 | Pfam | LIM-domain binding protein | 350 | 604 | IPR029005 | - | |
Cmo01g01061 | 910 | PANTHER | LIM DOMAIN-BINDING PROTEIN | 1 | 910 | IPR029005 | - | |
Cmo01g01061 | 910 | MobiDBLite | consensus disorder prediction | 8 | 41 | - | - | |
Cmo01g01061 | 910 | MobiDBLite | consensus disorder prediction | 64 | 93 | - | - | |
Cmo01g01061 | 910 | PANTHER | EXPRESSED PROTEIN | 1 | 910 | - | - | |
Cmo01g01061 | 910 | MobiDBLite | consensus disorder prediction | 682 | 774 | - | - | |
Cmo01g01061 | 910 | MobiDBLite | consensus disorder prediction | 613 | 670 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g01061 | Cmo-Chr1:8524802 | Cmo15g00639 | Cmo-Chr15:3096562 | 0 | dispersed | |
Cmo01g01061 | Cmo-Chr1:8524802 | Cmo04g02535 | Cmo-Chr4:18611539 | 0 | wgd | |
Cmo01g01061 | Cmo-Chr1:8524802 | Cmo09g01076 | Cmo-Chr9:5826816 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo01g01061 | - | - | csv:101221714 | 1340.1 |