Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g01061 ATGGTGCCTTCGGGGCCATCCACTCCCATTGGTGGTGCGCAGTCTGTTTCACCATCGCTTTTGAGATCAAATTCTGGAATGATGGGAGCACAAGGGGGGCTGCCTTCTCAGTCAGCTTTTCCTTCTCTTGTATCTCCACGAACTCAGTTTAGTAGTATGAATATGCTTGGTAATATGCCCAGTATGTCTTCTCTCCTTAATCAATCATTTGGGAATGGAGTTCCAAATTCTGGGCCCTCAGGTCTTGGAAACAGCCAACGAGGAAGTATGGACCCTGGTTCCGAGTCAGATCCATTTTCACTTGTTGGCAATGGTGTGAACTTCAATAATACGCCATCATCATTAGGGGCATCAAATACAGGAAACCCTGCTTCATCCAGTCAAGTTTCAGGGCCACAATTTTCAAACCATTCTAGCAGCCAAATAATACCCAATCAACAGCAGCCCCAGCAAATTGAGCCCCAGAACTTCCAACATAGTCAGCATTCAATGCAGCAGTTCGTTAGCTCTAATAATGCACAGCAGTCACAGCAGCAGCAGCAGCAGCAACAACAACAACAACAACATCAATTCCAACCTATACGAGGAAGCTTATGTGGTGTTGGACCTGTCAAGTTAGAGTCTCAAATGAATAATAATGATATTCAGGGGCAGCAACTACAGCAGCAGCAGCAGCAGCTGCAGTCAATGAGGAACCTTGGTCCTGTGAAACTGGAACCTCAACAACTTCAATCAATGAGAAACTTGGGTCCTGTGAAATTGGAACCTCAACAGTCTGATCAGTCATTGTTTCTACAGCAGCAACATCAACATCAGCAGCAGCAACAACAGCAGTTGCTCAGTATGTCTAGGCAGTCCTCTCAGGCGGCTGCTGCTGCGCAGATTAATCTTTTGCAACAACAAAGGCTCTTGCAATTTCAACACCAACAGCAACTCCTGAAGGCTATTCCTCAGCAAAGACCGCATTTGCCTCAACAATTTCAACAACAAAATTTGCCATTAAGATCCCCTGTAAAACCAGTTTATGAACCTGGCATGTGTGCTCGGCGTTTAACAAATTATATGTGTCAACAGCAGCAGAGACCTGAAGACAACAATATTGCATTCTGGAGGAAATTTGTTGCGGATTACTTTGCTCCACATGCCAAAAAGAAATGGTGTGTCTCCATGTATGGAAATGGACGCCAAACAACTGGTGTATTTCCACAGGATGTTTGGCATTGTGAAATATGCAACCGCAAGCCTGGTCGAGGTTTTGAAGCAACCTTTGAAGTTCTTCCAAGGCTGTTCAAAATCAAATATGAAAGTGGAACTCTTGAAGAACTTCTCTATATTGATATGCCCCGCGAATATCATAATTCCTCTGGACAAATTGTCCTAGATTACGCCAAAGCAATACAAGAAAGTGTGTTTGAGCAACTTCGTGTTGTTCGTGATGGCCAACTTCGGATAGTTTTTTCTCCAGACTTAAAGATATGTTCTTGGGAATTTTGTGCTCGACGTCATGAAGAGCTTATTCCTCGAAGGTTACTAATACCTCAGGTTAGTCAGCTGGGGGCAGCTGCTCAGAAGTATCAGACTGCTATTCAAAAGGCATCATCTAACTTGTCTACTCCCGAGTTGCAAAATAACTGTAACATGTTTGTGGGCTCAGCTAGACAATTGGCCAAGGCATTGGAAGTGCCATTAGTAAATGACTTGGGATATACGAAGAGATATGTCCGGTGCCTTCAGATATCAGAAGTCGTCAATAGTATGAAGGACTTGATAGATTACAGTCAAGAAACTTCGACAGGGCCAATTGAGAGTTTGGCCAAGTTTCCACGGAAGACAAATGCTTCACCAGGATTCCTCAGCCAAGCTCAAAACACTGAGCAACAATTACCTCAACCCCAGCAAACAATTGATCAAAACACAAACGGCGACCAAAGCTCTGTTCCGGCTTCTGCTAACAATGGTGCTCCAAATGCAAATAACCCCGCGAATCCAGCATCAACATCATCTCCTGCTAGTACCATTGTTGGGTTACTCCACCAGAATTCCATGAACTCCAGACAGCAGAACTCTATCAACAGTGCTGGAAGCCCTTATGCCGGGAACTCTGTGCAAATATCATCCCCAGGTTCCTCCACCACGATTGCTCAGGCACAAGCGAATCCCTCCTTCCATTCGCCTACATTGTCCTCATCTAACAATCCTCCGCAATCATCAATTGGAACTGCAACTACTAATCACGTAAGTGCCACAAACTCTCCGGTAAATGTTCCCCTGCAACAGCCAACACACTCCTCTGAAGCCGATCAATCCGATTCCCAGAGCTCCATGCAAAAGATTATTCAGGAATACATGATGTCAAACCAACTAAACGGGATGAACACAATGGCTGGTGTTTCCTCTCTAGCAGAGGATGTGAAACCTGTTAATGGGATGTTGGCAGCAAACAATATTATGAGTCTCAATGGACGGAACTGCCTGGTCGGGAGTGGAACTGCCAATGGTGTTTCTGGTATCAGGAGCATGGGGTATGGCTCGATGGGTGGTGGAGGACTTGCTCAGGCTTCTATGGTCAATGGAATGAAGTCTGCAATGGGAAGTAACTCGATTTCAAATGGGAGAATTGGGATGGCGTCATTGGCTCGAGAACAGAGCATAAATCATCAAGATTTGGGAGACCAGCTCCTTAATGGTCTGGGAGCAGTGAATGGGTTTAATAATCTTCAATTTGATTACTGA 2733 44.9 MVPSGPSTPIGGAQSVSPSLLRSNSGMMGAQGGLPSQSAFPSLVSPRTQFSSMNMLGNMPSMSSLLNQSFGNGVPNSGPSGLGNSQRGSMDPGSESDPFSLVGNGVNFNNTPSSLGASNTGNPASSSQVSGPQFSNHSSSQIIPNQQQPQQIEPQNFQHSQHSMQQFVSSNNAQQSQQQQQQQQQQQQHQFQPIRGSLCGVGPVKLESQMNNNDIQGQQLQQQQQQLQSMRNLGPVKLEPQQLQSMRNLGPVKLEPQQSDQSLFLQQQHQHQQQQQQQLLSMSRQSSQAAAAAQINLLQQQRLLQFQHQQQLLKAIPQQRPHLPQQFQQQNLPLRSPVKPVYEPGMCARRLTNYMCQQQQRPEDNNIAFWRKFVADYFAPHAKKKWCVSMYGNGRQTTGVFPQDVWHCEICNRKPGRGFEATFEVLPRLFKIKYESGTLEELLYIDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQTAIQKASSNLSTPELQNNCNMFVGSARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSQETSTGPIESLAKFPRKTNASPGFLSQAQNTEQQLPQPQQTIDQNTNGDQSSVPASANNGAPNANNPANPASTSSPASTIVGLLHQNSMNSRQQNSINSAGSPYAGNSVQISSPGSSTTIAQAQANPSFHSPTLSSSNNPPQSSIGTATTNHVSATNSPVNVPLQQPTHSSEADQSDSQSSMQKIIQEYMMSNQLNGMNTMAGVSSLAEDVKPVNGMLAANNIMSLNGRNCLVGSGTANGVSGIRSMGYGSMGGGGLAQASMVNGMKSAMGSNSISNGRIGMASLAREQSINHQDLGDQLLNGLGAVNGFNNLQFDY 910
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8524802 8539077 - CmoCh01G010610.1 Cmo01g01061 374544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g01061 910 MobiDBLite consensus disorder prediction 100 191 - -
Cmo01g01061 910 MobiDBLite consensus disorder prediction 607 670 - -
Cmo01g01061 910 MobiDBLite consensus disorder prediction 64 191 - -
Cmo01g01061 910 MobiDBLite consensus disorder prediction 1 41 - -
Cmo01g01061 910 Pfam LIM-domain binding protein 350 604 IPR029005 -
Cmo01g01061 910 PANTHER LIM DOMAIN-BINDING PROTEIN 1 910 IPR029005 -
Cmo01g01061 910 MobiDBLite consensus disorder prediction 8 41 - -
Cmo01g01061 910 MobiDBLite consensus disorder prediction 64 93 - -
Cmo01g01061 910 PANTHER EXPRESSED PROTEIN 1 910 - -
Cmo01g01061 910 MobiDBLite consensus disorder prediction 682 774 - -
Cmo01g01061 910 MobiDBLite consensus disorder prediction 613 670 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01061 Cmo-Chr1:8524802 Cmo15g00639 Cmo-Chr15:3096562 0 dispersed
Cmo01g01061 Cmo-Chr1:8524802 Cmo04g02535 Cmo-Chr4:18611539 0 wgd
Cmo01g01061 Cmo-Chr1:8524802 Cmo09g01076 Cmo-Chr9:5826816 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g01061 - - csv:101221714 1340.1