Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g01146 ATGTGTTCCTCTTCTCGCACTTTCCTTTTGCTGTTTCCTCTGCTTCTTCACTCGTTCGTGGCGCTGGTCTCTGCTCAGGGTTCTAATAATACCTCTCCATGGCAGACTCTGAGTGGAAATCCTCCATTCGTTGTGGCTCGCGGTGGATTTTCAGGGCTTTTTCCTGATTCGAGCGGAATCGCCTACAATTTTACACTGATGGTTAGTGTACCTGATGTGATCTTATGGTGTGATGTGCAATTAACTAAAGATGAAGTCGGAATTTGTCTCCCGGATCTGAGGCTCAACAATGCTACTAACAGTGCGAATGTTCTGGCGAAAAACCGCAGCAGTGTCTATGTTGTTAATGGAGTTCATACGGAAGGATTGTTCACAGTCGATTTCAATTCTAAAGATCTGGAAAATGTTACTCTTACTCAAGGAATCTACTCTCGACCTGACAATTTTGATGGCAATGGTTTTGCTATTCTCGGTCCTGAAGACGTGTATGAGCAGTTGCAACCACCAGGACTTTGGCTGAATATTCAGCATGATGCATTCTACACTCAACGAAACTTGAGCATGAGGAACTTCGTACTTTCTGTAACGAAACGCATCACTGTTAACTACATATCATCACCAGAGGTGGGATTTCTTAAAAGCATATCTTCAAGAATCAATCCCCACAAAACGAAGTTGATCCTTCGGGCATTAGGACCAGATACTATTGAGGTTACCACCAATCAAACATACGCCTCTCTCCTACGCAACCTCACTTTTATCAAGACATTTGCCTCTGGAATTCTTGTTCCCAAGACCTATATACGGCCCATTGATGGCGATGGCTACCTACAACCTGAAACCTCTCTTGTTTCTGATGCTCATAAAGCAGAGCTGGAAGTTTTTGCTTCAGAGTTCTATAATGACCTTCCACTGAGCTACAACTACAGCTATGATCCTATTACCGAGTACCTGTCGTACTTCGACGGTGGCAGATTTTCAGTTGATGGTGTGCTCACTGATTTCCCTATTAGTCCATCCGCAGCTATTGATTGTTTTACTCATTTGGATGATAAGGCAAAAAGTCAAGCCAAGCCTTTGGTTATTTCCAAATTTGGAGCCAGTGGAGACTTTCCTGCTTGCACAGACTTGGCGTATTCCAAGGCTATATCAGATGGTGTAGAAGTGCTCGACTGTCCTGTTCAAATGACAAAAGATGGGACACCATTTTGCATGAGCTCAATCAATCTTATTTACAGCACAAAAATATCTCAAACACCATTCATTAATCGTTCAAAAACAATTCCCGCCATTAGTTCTGAGAATGGAATCTTTGCTTTTGACTTAACATGGGAAGAGATTCAAGGCCTCACCCCTTCAATATCGAACCCTTTTTCAAATTTCACGTTGTTTCGAAACCCGAGGTTCCGAAACAGTGGGAAATTCTTAACGCTACCAGATTTCTTGGCCTTGGCAAAGAATGGGAGCTCTCTTTCCGGTGTCTTGATCCATATTGAGAATGCAGACTACCTTGCCAAGGAACAGGGTTTAAGTGTAATCGATGCGGTCTCTGATTCCTTGAGCAAAGCTGGTTATGATAATCAGACAGCCCTGAAAGTATTGATTCAGTCTCCAAATAGCCCTGTTCTTATAAAATTCAAAGAGGAAAAGAAAAATTACGAGCTTGTTTATGAAGTCGATATGTCAATTAGTGATGTGCTTAATGAAACTGTCGTGGACATCAAGAGTTTTGCCGATTCTGTCACTATCACCAAGGACTCAGTCTTTCCTGAAAACCAGCAATATCTCACTGGATCTACAAATGTTGTGACGAAGCTGCAATCACTTAATCTGTCTGTATATGTGGAAACCTTCAGCGATGAATTTGTCTCTCAAGCATGGGATTTCTTCTCTGATGCAACAGTAGAGATCAACTCATATGCTATGGGAGCCGGGATTGATGGAATCATCACCGATTTTCCGAAGACATCTGCTAGATATAAAAAGAACAGATGCTTAACAATGAAAGAGCTACCTAACTACATGATCCCTGTCCAGCCTGGTAGCTTGTTGCAACTCGTTACAGAGGCGTACTTGCCTCCAAAGAAAGCTTCAAGCCCGGTTCTGGGTGACAAAGACATAGCTGAGCCACCATTGTCTCCAGTCTCGAGCAAAGCCCCACCACCTGCTGGGGAAGGTGGCTCCGCCGCATCACCTCCAGCTCCTTCACGTAATGGACAACCTAAGCTTGGAGCTGGGGCAGGCTTCTTGCTCCTCAACCTTGCCATACTTTGCATAGTTATTCTTCCATTCTGA 2295 43.49 MCSSSRTFLLLFPLLLHSFVALVSAQGSNNTSPWQTLSGNPPFVVARGGFSGLFPDSSGIAYNFTLMVSVPDVILWCDVQLTKDEVGICLPDLRLNNATNSANVLAKNRSSVYVVNGVHTEGLFTVDFNSKDLENVTLTQGIYSRPDNFDGNGFAILGPEDVYEQLQPPGLWLNIQHDAFYTQRNLSMRNFVLSVTKRITVNYISSPEVGFLKSISSRINPHKTKLILRALGPDTIEVTTNQTYASLLRNLTFIKTFASGILVPKTYIRPIDGDGYLQPETSLVSDAHKAELEVFASEFYNDLPLSYNYSYDPITEYLSYFDGGRFSVDGVLTDFPISPSAAIDCFTHLDDKAKSQAKPLVISKFGASGDFPACTDLAYSKAISDGVEVLDCPVQMTKDGTPFCMSSINLIYSTKISQTPFINRSKTIPAISSENGIFAFDLTWEEIQGLTPSISNPFSNFTLFRNPRFRNSGKFLTLPDFLALAKNGSSLSGVLIHIENADYLAKEQGLSVIDAVSDSLSKAGYDNQTALKVLIQSPNSPVLIKFKEEKKNYELVYEVDMSISDVLNETVVDIKSFADSVTITKDSVFPENQQYLTGSTNVVTKLQSLNLSVYVETFSDEFVSQAWDFFSDATVEINSYAMGAGIDGIITDFPKTSARYKKNRCLTMKELPNYMIPVQPGSLLQLVTEAYLPPKKASSPVLGDKDIAEPPLSPVSSKAPPPAGEGGSAASPPAPSRNGQPKLGAGAGFLLLNLAILCIVILPF 764
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9395372 9402800 - CmoCh01G011460.1 Cmo01g01146 374629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g01146 764 ProSiteProfiles GP-PDE domain profile. 359 661 IPR030395 GO:0006629|GO:0008081
Cmo01g01146 764 Pfam Glycerophosphoryl diester phosphodiesterase family 366 656 IPR030395 GO:0006629|GO:0008081
Cmo01g01146 764 Gene3D Phosphatidylinositol (PI) phosphodiesterase 41 339 IPR017946 GO:0006629|GO:0008081
Cmo01g01146 764 Gene3D Phosphatidylinositol (PI) phosphodiesterase 357 660 IPR017946 GO:0006629|GO:0008081
Cmo01g01146 764 CDD GDPD_SHV3_repeat_1 42 342 - -
Cmo01g01146 764 SUPERFAMILY PLC-like phosphodiesterases 358 660 IPR017946 GO:0006629|GO:0008081
Cmo01g01146 764 CDD GDPD_SHV3_repeat_2 359 660 - -
Cmo01g01146 764 MobiDBLite consensus disorder prediction 709 740 - -
Cmo01g01146 764 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 15 742 - -
Cmo01g01146 764 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 15 742 - -
Cmo01g01146 764 SUPERFAMILY PLC-like phosphodiesterases 40 337 IPR017946 GO:0006629|GO:0008081
Cmo01g01146 764 ProSiteProfiles GP-PDE domain profile. 42 343 IPR030395 GO:0006629|GO:0008081
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01146 Cmo09g00981 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01146 Cmo-Chr1:9395372 Cmo03g00804 Cmo-Chr3:6521474 0 dispersed
Cmo01g01146 Cmo-Chr1:9395372 Cmo09g00981 Cmo-Chr9:5199176 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g01146 - - bhj:120086180 1167.91