Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g01180 ATGTTTAGATTGGGTCTTAGTTTGTATCGGCCGGATTCTCGTCTTGCTTGTTTAGATTCTGTTATTGTGGGTGTTCGAGTTTTGATCCAAACAAGGTTGATGGTTGAAATAGACGTCCAAATCCCATCCGCTTACGATCCATTCGCAGACGCCAAGGATTCCGATGCCCCGGGAGGCAAAGAGTATGTTCATATCCGCGTGCAGCAGAGGAATGGCAAGAAGTGCTTGACAACAGTCCAGGGTCTGAAGAAGGATTTCAGCTACGAGAAGATCCTCAAAGACGTGAAGAAGGAGTTTTGCTGTAATGGTAACGTCGTCCAAGACAAAGAATTGGGGAAGATAATTCAGCTTCAGGGCGATCAGCGCAAGAACGTGTCTCAGTTCCTGGTTCAGGCTGGGATTGTTAAGAAGGATCAGATCAAAATCCATGGATTTTAA 438 45.66 MFRLGLSLYRPDSRLACLDSVIVGVRVLIQTRLMVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 145
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9608583 9609570 + CmoCh01G011800.1 Cmo01g01180 374663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g01180 145 PANTHER BNAA10G09260D PROTEIN 34 145 - -
Cmo01g01180 145 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 38 145 IPR005874 GO:0003743
Cmo01g01180 145 ProSiteProfiles Translation initiation factor SUI1 family profile. 63 133 IPR001950 GO:0003743|GO:0006413
Cmo01g01180 145 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 34 145 - -
Cmo01g01180 145 SUPERFAMILY eIF1-like 35 145 IPR036877 GO:0003743|GO:0006413
Cmo01g01180 145 CDD eIF1_SUI1 61 144 IPR005874 GO:0003743
Cmo01g01180 145 Pfam Translation initiation factor SUI1 60 134 IPR001950 GO:0003743|GO:0006413
Cmo01g01180 145 Gene3D - 28 145 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01180 Cmo09g00953 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01180 Cmo-Chr1:9608583 Cmo09g00953 Cmo-Chr9:5015254 1.80E-73 dispersed
Cmo01g01180 Cmo-Chr1:9608583 Cmo19g00955 Cmo-Chr19:8717832 4.25E-62 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g01180 K03113 - csv:101202908 219.55